RNA–Protein interactions for RNA: ENST00000611963.4

TARDBP-213, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-213ENST00000611963 RPUSD4Q96CM3 377 aaKnown RBP6.18□□□□□ -1.42
TARDBP-213ENST00000611963 DUX3Q96PT4 197 aa6.18□□□□□ -1.42
TARDBP-213ENST00000611963 ELOVL1Q9BW60 279 aa6.18□□□□□ -1.42
TARDBP-213ENST00000611963 SEC11CQ9BY50 192 aa6.18□□□□□ -1.42
TARDBP-213ENST00000611963 SMDT1Q9H4I9 107 aa6.18□□□□□ -1.42
TARDBP-213ENST00000611963 CARHSP1Q9Y2V2 147 aaKnown RBP6.18□□□□□ -1.42
TARDBP-213ENST00000611963 RNF114Q9Y508 228 aa6.18□□□□□ -1.42
TARDBP-213ENST00000611963 SELENOKQ9Y6D0 94 aa6.18□□□□□ -1.42
TARDBP-213ENST00000611963 U3KQE9 123 aa6.18□□□□□ -1.42
TARDBP-213ENST00000611963 ARL2-SNX15V9GYD0 113 aa6.18□□□□□ -1.42
TARDBP-213ENST00000611963 A0A1W2PRE2 83 aa6.17□□□□□ -1.42
TARDBP-213ENST00000611963 F6UZH7 168 aa6.17□□□□□ -1.42
TARDBP-213ENST00000611963 SLC17A3O00476 420 aa6.17□□□□□ -1.42
TARDBP-213ENST00000611963 BUB3O43684 328 aa6.17□□□□□ -1.42
TARDBP-213ENST00000611963 SCO1O75880 301 aa6.17□□□□□ -1.42
TARDBP-213ENST00000611963 NDUFB4O95168 129 aa6.17□□□□□ -1.42
TARDBP-213ENST00000611963 IGLC2P0DOY2 106 aa6.17□□□□□ -1.42
TARDBP-213ENST00000611963 PRB4P10163 310 aaPredicted RBP6.17□□□□□ -1.42
TARDBP-213ENST00000611963 RPL7P18124 248 aaKnown RBP6.17□□□□□ -1.42
TARDBP-213ENST00000611963 ATF4P18848 351 aaPredicted RBP6.17□□□□□ -1.42
TARDBP-213ENST00000611963 CRYBB3P26998 211 aa6.17□□□□□ -1.42
TARDBP-213ENST00000611963 CDX1P47902 265 aaPredicted RBP6.17□□□□□ -1.42
TARDBP-213ENST00000611963 SLURP1P55000 103 aa6.17□□□□□ -1.42
TARDBP-213ENST00000611963 SYNJ2BPP57105 145 aa6.17□□□□□ -1.42
TARDBP-213ENST00000611963 RANP62826 216 aaKnown RBP6.17□□□□□ -1.42
TARDBP-213ENST00000611963 FAM106AQ4KMX7 169 aa6.17□□□□□ -1.42
TARDBP-213ENST00000611963 AWAT1Q58HT5 328 aa6.17□□□□□ -1.42
TARDBP-213ENST00000611963 ATRAIDQ6UW56 229 aa6.17□□□□□ -1.42
TARDBP-213ENST00000611963 C4orf3Q8WVX3 66 aa6.17□□□□□ -1.42
TARDBP-213ENST00000611963 CITED2Q99967 270 aaPredicted RBP6.17□□□□□ -1.42
TARDBP-213ENST00000611963 Q9H3A6 140 aa6.17□□□□□ -1.42
TARDBP-213ENST00000611963 SMAD5-AS1Q9Y6J3 95 aa6.17□□□□□ -1.42
TARDBP-213ENST00000611963 TRBV19A0A075B6N1 114 aa6.16□□□□□ -1.42
TARDBP-213ENST00000611963 PGPA6NDG6 321 aa6.16□□□□□ -1.42
TARDBP-213ENST00000611963 TMEM250H0YL14 139 aa6.16□□□□□ -1.42
TARDBP-213ENST00000611963 PDE6DO43924 150 aa6.16□□□□□ -1.42
TARDBP-213ENST00000611963 SLC25A5P05141 298 aaKnown RBP6.16□□□□□ -1.42
TARDBP-213ENST00000611963 S100A7P31151 101 aa6.16□□□□□ -1.42
TARDBP-213ENST00000611963 HOXD3P31249 432 aaPredicted RBP6.16□□□□□ -1.42
TARDBP-213ENST00000611963 PROK1P58294 105 aa6.16□□□□□ -1.42
TARDBP-213ENST00000611963 SUMO1P63165 101 aaKnown RBP6.16□□□□□ -1.42
TARDBP-213ENST00000611963 GNG5P63218 68 aa6.16□□□□□ -1.42
TARDBP-213ENST00000611963 C16orf54Q6UWD8 224 aa6.16□□□□□ -1.42
TARDBP-213ENST00000611963 GPHB5Q86YW7 130 aa6.16□□□□□ -1.42
TARDBP-213ENST00000611963 CCDC28AQ8IWP9 274 aa6.16□□□□□ -1.42
TARDBP-213ENST00000611963 EXOC3-AS1Q8N2X6 119 aa6.16□□□□□ -1.42
TARDBP-213ENST00000611963 GLMPQ8WWB7 406 aa6.16□□□□□ -1.42
TARDBP-213ENST00000611963 SMIM7Q9BQ49 75 aa6.16□□□□□ -1.42
TARDBP-213ENST00000611963 DERL1Q9BUN8 251 aa6.16□□□□□ -1.42
TARDBP-213ENST00000611963 PARLQ9H300 379 aa6.16□□□□□ -1.42
TARDBP-213ENST00000611963 OTORQ9NRC9 128 aa6.16□□□□□ -1.42
TARDBP-213ENST00000611963 RPH3ALQ9UNE2 315 aa6.16□□□□□ -1.42
TARDBP-213ENST00000611963 AGRNO00468 2067 aa6.16□□□□□ -1.42
TARDBP-213ENST00000611963 IGHV7-4-1A0A0J9YVY3 117 aa6.15□□□□□ -1.42
TARDBP-213ENST00000611963 TMEM213A2RRL7 107 aa6.15□□□□□ -1.42
TARDBP-213ENST00000611963 ZNF785A8K8V0 405 aa6.15□□□□□ -1.42
TARDBP-213ENST00000611963 ZNF727A8MUV8 499 aa6.15□□□□□ -1.42
TARDBP-213ENST00000611963 LINC01619G3V211 115 aa6.15□□□□□ -1.42
TARDBP-213ENST00000611963 PEX7O00628 323 aa6.15□□□□□ -1.42
TARDBP-213ENST00000611963 NDUFS6O75380 124 aaKnown RBP6.15□□□□□ -1.42
TARDBP-213ENST00000611963 HLA-DMBP28068 263 aa6.15□□□□□ -1.42
TARDBP-213ENST00000611963 MYCNOSP40205 109 aa6.15□□□□□ -1.42
TARDBP-213ENST00000611963 GALR1P47211 349 aa6.15□□□□□ -1.42
TARDBP-213ENST00000611963 KRTAP10-3P60369 221 aa6.15□□□□□ -1.42
TARDBP-213ENST00000611963 C1orf194Q5T5A4 169 aa6.15□□□□□ -1.42
TARDBP-213ENST00000611963 SIGLEC15Q6ZMC9 328 aa6.15□□□□□ -1.42
TARDBP-213ENST00000611963 REC114Q7Z4M0 266 aa6.15□□□□□ -1.42
TARDBP-213ENST00000611963 OR11H1Q8NG94 326 aa6.15□□□□□ -1.42
TARDBP-213ENST00000611963 OR1N2Q8NGR9 330 aa6.15□□□□□ -1.42
TARDBP-213ENST00000611963 DPF1Q92782 380 aa6.15□□□□□ -1.42
TARDBP-213ENST00000611963 C11orf52Q96A22 123 aa6.15□□□□□ -1.42
TARDBP-213ENST00000611963 RAX2Q96IS3 184 aa6.15□□□□□ -1.42
TARDBP-213ENST00000611963 TXNDC17Q9BRA2 123 aa6.15□□□□□ -1.42
TARDBP-213ENST00000611963 DAZ1Q9NQZ3 744 aaKnown RBP6.15□□□□□ -1.42
TARDBP-213ENST00000611963 UFC1Q9Y3C8 167 aa6.15□□□□□ -1.42
TARDBP-213ENST00000611963 TSSC4Q9Y5U2 329 aaPredicted RBP6.15□□□□□ -1.42
TARDBP-213ENST00000611963 A0A087X0K7 114 aa6.14□□□□□ -1.43
TARDBP-213ENST00000611963 TRAV34A0A0B4J273 112 aa6.14□□□□□ -1.43
TARDBP-213ENST00000611963 M0R036 132 aa6.14□□□□□ -1.43
TARDBP-213ENST00000611963 CHEK1O14757 476 aa6.14□□□□□ -1.43
TARDBP-213ENST00000611963 AKR1C3P42330 323 aa6.14□□□□□ -1.43
TARDBP-213ENST00000611963 RPL35P42766 123 aaKnown RBP6.14□□□□□ -1.43
TARDBP-213ENST00000611963 FOXL1Q12952 345 aa6.14□□□□□ -1.43
TARDBP-213ENST00000611963 KLF5Q13887 457 aaPredicted RBP6.14□□□□□ -1.43
TARDBP-213ENST00000611963 NSUN5P1Q3KNT7 163 aa6.14□□□□□ -1.43
TARDBP-213ENST00000611963 IGFL4Q6B9Z1 124 aa6.14□□□□□ -1.43
TARDBP-213ENST00000611963 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.14□□□□□ -1.43
TARDBP-213ENST00000611963 C1QL4Q86Z23 238 aa6.14□□□□□ -1.43
TARDBP-213ENST00000611963 SVBPQ8N300 66 aa6.14□□□□□ -1.43
TARDBP-213ENST00000611963 C3orf56Q8N813 242 aa6.14□□□□□ -1.43
TARDBP-213ENST00000611963 CLRN3Q8NCR9 226 aa6.14□□□□□ -1.43
TARDBP-213ENST00000611963 C2CD4CQ8TF44 421 aa6.14□□□□□ -1.43
TARDBP-213ENST00000611963 LINC00479Q96M42 142 aa6.14□□□□□ -1.43
TARDBP-213ENST00000611963 GPR82Q96P67 336 aa6.14□□□□□ -1.43
TARDBP-213ENST00000611963 NIPSNAP3BQ9BS92 247 aa6.14□□□□□ -1.43
TARDBP-213ENST00000611963 RHPN1-AS1Q9BWJ2 59 aa6.14□□□□□ -1.43
TARDBP-213ENST00000611963 NKX6-2Q9C056 277 aaPredicted RBP6.14□□□□□ -1.43
TARDBP-213ENST00000611963 SMPXQ9UHP9 88 aa6.14□□□□□ -1.43
TARDBP-213ENST00000611963 RNF24Q9Y225 148 aa6.14□□□□□ -1.43
TARDBP-213ENST00000611963 CMYA5Q8N3K9 4069 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms