RNA–Protein interactions for RNA: ENST00000611950.1

PCDHGC3-202, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGC3, Length 2,849 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-202ENST00000611950 PMCHL1Q16048 86 aa8.62□□□□□ -1.03
PCDHGC3-202ENST00000611950 MMD2Q8IY49 270 aa8.62□□□□□ -1.03
PCDHGC3-202ENST00000611950 FLYWCH2Q96CP2 140 aaKnown RBP8.62□□□□□ -1.03
PCDHGC3-202ENST00000611950 NABP2Q9BQ15 211 aa8.62□□□□□ -1.03
PCDHGC3-202ENST00000611950 PLEKHA3Q9HB20 300 aa8.62□□□□□ -1.03
PCDHGC3-202ENST00000611950 CELSR2Q9HCU4 2923 aa8.62□□□□□ -1.03
PCDHGC3-202ENST00000611950 ORM1P02763 201 aa8.62□□□□□ -1.03
PCDHGC3-202ENST00000611950 REG1AP05451 166 aa8.62□□□□□ -1.03
PCDHGC3-202ENST00000611950 IGLL1P15814 213 aa8.62□□□□□ -1.03
PCDHGC3-202ENST00000611950 HSPE1P61604 102 aaKnown RBP8.62□□□□□ -1.03
PCDHGC3-202ENST00000611950 DIAPH2-AS1Q14236 149 aa8.62□□□□□ -1.03
PCDHGC3-202ENST00000611950 OR10AG1Q8NH19 301 aa8.62□□□□□ -1.03
PCDHGC3-202ENST00000611950 OR2T6Q8NHC8 308 aa8.62□□□□□ -1.03
PCDHGC3-202ENST00000611950 VSTM2AQ8TAG5 236 aa8.62□□□□□ -1.03
PCDHGC3-202ENST00000611950 CDIP1Q9H305 208 aa8.62□□□□□ -1.03
PCDHGC3-202ENST00000611950 LSM4Q9Y4Z0 139 aaKnown RBP8.62□□□□□ -1.03
PCDHGC3-202ENST00000611950 FAM215AQ9Y5M1 114 aa8.62□□□□□ -1.03
PCDHGC3-202ENST00000611950 E7EUB6 86 aa8.62□□□□□ -1.03
PCDHGC3-202ENST00000611950 H3BRM9 83 aa8.62□□□□□ -1.03
PCDHGC3-202ENST00000611950 ST6GALNAC6Q969X2 333 aa8.62□□□□□ -1.03
PCDHGC3-202ENST00000611950 TMEM133Q9H2Q1 129 aa8.62□□□□□ -1.03
PCDHGC3-202ENST00000611950 SPCS1Q9Y6A9 102 aa8.62□□□□□ -1.03
PCDHGC3-202ENST00000611950 TRGV10A0A0A0MS01 117 aa8.61□□□□□ -1.03
PCDHGC3-202ENST00000611950 A1L4Q6 167 aa8.61□□□□□ -1.03
PCDHGC3-202ENST00000611950 H3BTX0 84 aa8.61□□□□□ -1.03
PCDHGC3-202ENST00000611950 H3BUT2 72 aa8.61□□□□□ -1.03
PCDHGC3-202ENST00000611950 PPIFP30405 207 aaKnown RBP8.61□□□□□ -1.03
PCDHGC3-202ENST00000611950 TNFAIP6P98066 277 aaPredicted RBP8.61□□□□□ -1.03
PCDHGC3-202ENST00000611950 WNK2Q9Y3S1 2297 aa8.61□□□□□ -1.03
PCDHGC3-202ENST00000611950 MAP1AP78559 2803 aaPredicted RBP8.61□□□□□ -1.03
PCDHGC3-202ENST00000611950 IGHV3-72A0A0B4J1Y9 119 aa8.61□□□□□ -1.03
PCDHGC3-202ENST00000611950 MPDU1O75352 247 aa8.61□□□□□ -1.03
PCDHGC3-202ENST00000611950 THBDP07204 575 aa8.61□□□□□ -1.03
PCDHGC3-202ENST00000611950 PYYP10082 97 aa8.61□□□□□ -1.03
PCDHGC3-202ENST00000611950 GNLYP22749 145 aa8.61□□□□□ -1.03
PCDHGC3-202ENST00000611950 MZT1Q08AG7 82 aa8.61□□□□□ -1.03
PCDHGC3-202ENST00000611950 CR1LQ2VPA4 569 aa8.61□□□□□ -1.03
PCDHGC3-202ENST00000611950 C3orf36Q3SXR2 165 aa8.61□□□□□ -1.03
PCDHGC3-202ENST00000611950 LCNL1Q6ZST4 164 aa8.61□□□□□ -1.03
PCDHGC3-202ENST00000611950 Q6ZUT4 128 aa8.61□□□□□ -1.03
PCDHGC3-202ENST00000611950 ATOH7Q8N100 152 aa8.61□□□□□ -1.03
PCDHGC3-202ENST00000611950 FAM19A2Q8N3H0 131 aa8.61□□□□□ -1.03
PCDHGC3-202ENST00000611950 C1orf43Q9BWL3 253 aa8.61□□□□□ -1.03
PCDHGC3-202ENST00000611950 GGTLC3B5MD39 225 aa8.6□□□□□ -1.03
PCDHGC3-202ENST00000611950 LHBP01229 141 aa8.6□□□□□ -1.03
PCDHGC3-202ENST00000611950 SAA1P0DJI8 122 aaPredicted RBP8.6□□□□□ -1.03
PCDHGC3-202ENST00000611950 STUMQ69YW2 141 aa8.6□□□□□ -1.03
PCDHGC3-202ENST00000611950 ZFAND6Q6FIF0 208 aa8.6□□□□□ -1.03
PCDHGC3-202ENST00000611950 OR5AN1Q8NGI8 311 aa8.6□□□□□ -1.03
PCDHGC3-202ENST00000611950 H1FXQ92522 213 aaKnown RBP8.6□□□□□ -1.03
PCDHGC3-202ENST00000611950 ZNF503Q96F45 646 aa8.6□□□□□ -1.03
PCDHGC3-202ENST00000611950 IL36BQ9NZH7 164 aa8.6□□□□□ -1.03
PCDHGC3-202ENST00000611950 MALRD1Q5VYJ5 2156 aa8.6□□□□□ -1.03
PCDHGC3-202ENST00000611950 LOC107984640A0A0U1RRK4 108 aa8.6□□□□□ -1.03
PCDHGC3-202ENST00000611950 A6NDN8 102 aa8.6□□□□□ -1.03
PCDHGC3-202ENST00000611950 C3orf79P0CE67 100 aa8.6□□□□□ -1.03
PCDHGC3-202ENST00000611950 CGB3P0DN86 165 aa8.6□□□□□ -1.03
PCDHGC3-202ENST00000611950 CGB7P0DN87 165 aa8.6□□□□□ -1.03
PCDHGC3-202ENST00000611950 SRIP30626 198 aa8.6□□□□□ -1.03
PCDHGC3-202ENST00000611950 RPEL1Q2QD12 228 aa8.6□□□□□ -1.03
PCDHGC3-202ENST00000611950 FAM168AQ92567 244 aa8.6□□□□□ -1.03
PCDHGC3-202ENST00000611950 TMEM14BQ9NUH8 114 aa8.6□□□□□ -1.03
PCDHGC3-202ENST00000611950 H0YJW9 148 aa8.59□□□□□ -1.03
PCDHGC3-202ENST00000611950 CT45A6P0DMU7 189 aa8.59□□□□□ -1.03
PCDHGC3-202ENST00000611950 CT45A5P0DMU8 189 aa8.59□□□□□ -1.03
PCDHGC3-202ENST00000611950 CT45A7P0DMV0 189 aa8.59□□□□□ -1.03
PCDHGC3-202ENST00000611950 SEC11AP67812 179 aa8.59□□□□□ -1.03
PCDHGC3-202ENST00000611950 SPATA12Q7Z6I5 190 aa8.59□□□□□ -1.03
PCDHGC3-202ENST00000611950 OR13C6PQ8NH95 151 aa8.59□□□□□ -1.03
PCDHGC3-202ENST00000611950 MRPL20Q9BYC9 149 aaKnown RBP8.59□□□□□ -1.03
PCDHGC3-202ENST00000611950 GNB4Q9HAV0 340 aa8.59□□□□□ -1.03
PCDHGC3-202ENST00000611950 INSIG2Q9Y5U4 225 aa8.59□□□□□ -1.03
PCDHGC3-202ENST00000611950 ARHGAP32A7KAX9 2087 aa8.59□□□□□ -1.03
PCDHGC3-202ENST00000611950 OR2J3O76001 311 aa8.59□□□□□ -1.03
PCDHGC3-202ENST00000611950 KLRD1Q13241 179 aa8.59□□□□□ -1.03
PCDHGC3-202ENST00000611950 Q6AWC8 147 aa8.59□□□□□ -1.03
PCDHGC3-202ENST00000611950 V9GYV3 84 aa8.59□□□□□ -1.03
PCDHGC3-202ENST00000611950 IGLV3-9A0A075B6K5 115 aa8.58□□□□□ -1.04
PCDHGC3-202ENST00000611950 TEX50A0A1B0GTY4 177 aa8.58□□□□□ -1.04
PCDHGC3-202ENST00000611950 FAM90A9PA6NNJ1 464 aa8.58□□□□□ -1.04
PCDHGC3-202ENST00000611950 IGHV1-46P01743 117 aa8.58□□□□□ -1.04
PCDHGC3-202ENST00000611950 XGP55808 180 aa8.58□□□□□ -1.04
PCDHGC3-202ENST00000611950 GAFA1Q96PS6 74 aa8.58□□□□□ -1.04
PCDHGC3-202ENST00000611950 RNF7Q9UBF6 113 aa8.58□□□□□ -1.04
PCDHGC3-202ENST00000611950 ABCA12Q86UK0 2595 aa8.58□□□□□ -1.04
PCDHGC3-202ENST00000611950 CD24P25063 80 aa8.58□□□□□ -1.04
PCDHGC3-202ENST00000611950 PRR20EP86478 221 aa8.58□□□□□ -1.04
PCDHGC3-202ENST00000611950 PRR20CP86479 221 aa8.58□□□□□ -1.04
PCDHGC3-202ENST00000611950 PRR20DP86480 221 aa8.58□□□□□ -1.04
PCDHGC3-202ENST00000611950 PRR20BP86481 221 aa8.58□□□□□ -1.04
PCDHGC3-202ENST00000611950 PRR20AP86496 221 aa8.58□□□□□ -1.04
PCDHGC3-202ENST00000611950 TEX29Q8N6K0 151 aa8.58□□□□□ -1.04
PCDHGC3-202ENST00000611950 ZNF439Q8NDP4 499 aa8.58□□□□□ -1.04
PCDHGC3-202ENST00000611950 OSR1Q8TAX0 266 aaPredicted RBP8.58□□□□□ -1.04
PCDHGC3-202ENST00000611950 TP73-AS1Q9UF72 201 aa8.58□□□□□ -1.04
PCDHGC3-202ENST00000611950 A0A1W2PPM0 123 aa8.58□□□□□ -1.04
PCDHGC3-202ENST00000611950 MOSP00540 346 aa8.58□□□□□ -1.04
PCDHGC3-202ENST00000611950 COL8A1P27658 744 aa8.58□□□□□ -1.04
PCDHGC3-202ENST00000611950 GNG5P63218 68 aa8.58□□□□□ -1.04
PCDHGC3-202ENST00000611950 UBE2L3P68036 154 aaKnown RBP8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms