RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 HIST1H2BHQ93079 126 aa6.8□□□□□ -1.32
SMAD4-217ENST00000611848 PFDN5Q99471 154 aa6.8□□□□□ -1.32
SMAD4-217ENST00000611848 TRGV9Q99603 122 aa6.8□□□□□ -1.32
SMAD4-217ENST00000611848 HIST1H2BNQ99877 126 aa6.8□□□□□ -1.32
SMAD4-217ENST00000611848 HIST1H2BMQ99879 126 aa6.8□□□□□ -1.32
SMAD4-217ENST00000611848 SLC25A2Q9BXI2 301 aa6.8□□□□□ -1.32
SMAD4-217ENST00000611848 KLK9Q9UKQ9 250 aa6.8□□□□□ -1.32
SMAD4-217ENST00000611848 IGHV3-11P01762 117 aa6.79□□□□□ -1.32
SMAD4-217ENST00000611848 TYMSP04818 313 aa6.79□□□□□ -1.32
SMAD4-217ENST00000611848 MEOX2P50222 304 aa6.79□□□□□ -1.32
SMAD4-217ENST00000611848 RHOGP84095 191 aa6.79□□□□□ -1.32
SMAD4-217ENST00000611848 ZNF90Q03938 601 aa6.79□□□□□ -1.32
SMAD4-217ENST00000611848 FHL3Q13643 280 aa6.79□□□□□ -1.32
SMAD4-217ENST00000611848 DEFB136Q30KP8 78 aa6.79□□□□□ -1.32
SMAD4-217ENST00000611848 FAM209BQ5JX69 171 aa6.79□□□□□ -1.32
SMAD4-217ENST00000611848 LINC00482Q8N8I6 264 aa6.79□□□□□ -1.32
SMAD4-217ENST00000611848 DPF1Q92782 380 aa6.79□□□□□ -1.32
SMAD4-217ENST00000611848 ELOVL1Q9BW60 279 aa6.79□□□□□ -1.32
SMAD4-217ENST00000611848 THYN1Q9P016 225 aa6.79□□□□□ -1.32
SMAD4-217ENST00000611848 F11RQ9Y624 299 aaKnown RBP6.79□□□□□ -1.32
SMAD4-217ENST00000611848 ELOA3CA0A087WX78 387 aaPredicted RBP6.79□□□□□ -1.32
SMAD4-217ENST00000611848 LINC01619G3V211 115 aa6.79□□□□□ -1.32
SMAD4-217ENST00000611848 COX7A2P2O60397 106 aa6.79□□□□□ -1.32
SMAD4-217ENST00000611848 OR7C2O60412 319 aa6.79□□□□□ -1.32
SMAD4-217ENST00000611848 EIF4EBP3O60516 100 aaPredicted RBP6.79□□□□□ -1.32
SMAD4-217ENST00000611848 OR2J3O76001 311 aa6.79□□□□□ -1.32
SMAD4-217ENST00000611848 ATP5G2Q06055 141 aa6.79□□□□□ -1.32
SMAD4-217ENST00000611848 MORN5Q5VZ52 161 aa6.79□□□□□ -1.32
SMAD4-217ENST00000611848 C10orf113Q5VZT2 155 aa6.79□□□□□ -1.32
SMAD4-217ENST00000611848 OR1L6Q8NGR2 347 aa6.79□□□□□ -1.32
SMAD4-217ENST00000611848 OR4X1Q8NH49 305 aa6.79□□□□□ -1.32
SMAD4-217ENST00000611848 OCC1Q8TAD7 63 aa6.79□□□□□ -1.32
SMAD4-217ENST00000611848 FRZBQ92765 325 aa6.79□□□□□ -1.32
SMAD4-217ENST00000611848 MISP3Q96FF7 219 aa6.79□□□□□ -1.32
SMAD4-217ENST00000611848 SFRP2Q96HF1 295 aa6.79□□□□□ -1.32
SMAD4-217ENST00000611848 FANCD2OSQ96PS1 177 aa6.79□□□□□ -1.32
SMAD4-217ENST00000611848 C12orf57Q99622 126 aa6.79□□□□□ -1.32
SMAD4-217ENST00000611848 TCEAL7Q9BRU2 100 aa6.79□□□□□ -1.32
SMAD4-217ENST00000611848 MCRIP2Q9BUT9 160 aaKnown RBP6.79□□□□□ -1.32
SMAD4-217ENST00000611848 DMRT1Q9Y5R6 373 aa6.79□□□□□ -1.32
SMAD4-217ENST00000611848 IGLV11-55A0A075B6I3 123 aa6.78□□□□□ -1.32
SMAD4-217ENST00000611848 TRAV5A0A0B4J249 113 aa6.78□□□□□ -1.32
SMAD4-217ENST00000611848 PGPEP1LA6NFU8 196 aa6.78□□□□□ -1.32
SMAD4-217ENST00000611848 GGTLC3B5MD39 225 aa6.78□□□□□ -1.32
SMAD4-217ENST00000611848 IGHV3-48P01763 117 aa6.78□□□□□ -1.32
SMAD4-217ENST00000611848 TRGC1P0CF51 173 aa6.78□□□□□ -1.32
SMAD4-217ENST00000611848 SMIM6P0DI80 62 aa6.78□□□□□ -1.32
SMAD4-217ENST00000611848 FAM3BP58499 235 aaPredicted RBP6.78□□□□□ -1.32
SMAD4-217ENST00000611848 PLP1P60201 277 aa6.78□□□□□ -1.32
SMAD4-217ENST00000611848 C15orf32Q32M92 178 aa6.78□□□□□ -1.32
SMAD4-217ENST00000611848 KCNIP4Q6PIL6 250 aa6.78□□□□□ -1.32
SMAD4-217ENST00000611848 BTF3L4Q96K17 158 aa6.78□□□□□ -1.32
SMAD4-217ENST00000611848 DUX3Q96PT4 197 aa6.78□□□□□ -1.32
SMAD4-217ENST00000611848 PEF1Q9UBV8 284 aaKnown RBP6.78□□□□□ -1.32
SMAD4-217ENST00000611848 FBXL7Q9UJT9 491 aa6.78□□□□□ -1.32
SMAD4-217ENST00000611848 SORL1Q92673 2214 aa6.78□□□□□ -1.32
SMAD4-217ENST00000611848 FBN3Q75N90 2809 aa6.77□□□□□ -1.32
SMAD4-217ENST00000611848 IGHV4OR15-8A0A075B7B6 117 aa6.77□□□□□ -1.33
SMAD4-217ENST00000611848 A0A087WW49 117 aa6.77□□□□□ -1.33
SMAD4-217ENST00000611848 HELTA6NFD8 242 aa6.77□□□□□ -1.33
SMAD4-217ENST00000611848 IFITM10A6NMD0 228 aa6.77□□□□□ -1.33
SMAD4-217ENST00000611848 PPP5D1E7EU14 171 aa6.77□□□□□ -1.33
SMAD4-217ENST00000611848 I3L2K1 104 aa6.77□□□□□ -1.33
SMAD4-217ENST00000611848 K7EN84 100 aa6.77□□□□□ -1.33
SMAD4-217ENST00000611848 OR10J4P0C629 311 aa6.77□□□□□ -1.33
SMAD4-217ENST00000611848 CRYBB3P26998 211 aa6.77□□□□□ -1.33
SMAD4-217ENST00000611848 NDUFA6P56556 154 aa6.77□□□□□ -1.33
SMAD4-217ENST00000611848 C19orf35Q6ZS72 473 aa6.77□□□□□ -1.33
SMAD4-217ENST00000611848 STXBP6Q8NFX7 210 aa6.77□□□□□ -1.33
SMAD4-217ENST00000611848 FXYD5Q96DB9 178 aa6.77□□□□□ -1.33
SMAD4-217ENST00000611848 GPR61Q9BZJ8 451 aa6.77□□□□□ -1.33
SMAD4-217ENST00000611848 AURKAIP1Q9NWT8 199 aaPredicted RBP6.77□□□□□ -1.33
SMAD4-217ENST00000611848 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.76□□□□□ -1.33
SMAD4-217ENST00000611848 A0A1W2PPQ1 181 aa6.76□□□□□ -1.33
SMAD4-217ENST00000611848 NDUFB8O95169 186 aa6.76□□□□□ -1.33
SMAD4-217ENST00000611848 SUMO1P63165 101 aaKnown RBP6.76□□□□□ -1.33
SMAD4-217ENST00000611848 UBE2L3P68036 154 aaKnown RBP6.76□□□□□ -1.33
SMAD4-217ENST00000611848 OR10G8Q8NGN5 311 aa6.76□□□□□ -1.33
SMAD4-217ENST00000611848 VN1R17PQ8TDU5 208 aa6.76□□□□□ -1.33
SMAD4-217ENST00000611848 EEF1AKMT3Q96AZ1 226 aa6.76□□□□□ -1.33
SMAD4-217ENST00000611848 PAXXQ9BUH6 204 aa6.76□□□□□ -1.33
SMAD4-217ENST00000611848 OR51M1Q9H341 326 aa6.76□□□□□ -1.33
SMAD4-217ENST00000611848 TRAV9-1A0A075B6T8 112 aa6.76□□□□□ -1.33
SMAD4-217ENST00000611848 TRBV7-1A0A0A6YYK4 115 aa6.76□□□□□ -1.33
SMAD4-217ENST00000611848 HYPMO75409 117 aa6.76□□□□□ -1.33
SMAD4-217ENST00000611848 IGLC1P0CG04 106 aa6.76□□□□□ -1.33
SMAD4-217ENST00000611848 IGLL1P15814 213 aa6.76□□□□□ -1.33
SMAD4-217ENST00000611848 HOXD3P31249 432 aaPredicted RBP6.76□□□□□ -1.33
SMAD4-217ENST00000611848 GNG4P50150 75 aa6.76□□□□□ -1.33
SMAD4-217ENST00000611848 SLURP1P55000 103 aa6.76□□□□□ -1.33
SMAD4-217ENST00000611848 CENPWQ5EE01 88 aa6.76□□□□□ -1.33
SMAD4-217ENST00000611848 ACTL10Q5JWF8 245 aa6.76□□□□□ -1.33
SMAD4-217ENST00000611848 LINC00305Q7Z4B0 112 aa6.76□□□□□ -1.33
SMAD4-217ENST00000611848 IGF2BP2-AS1Q96M15 143 aa6.76□□□□□ -1.33
SMAD4-217ENST00000611848 G3V4G9 280 aa6.75□□□□□ -1.33
SMAD4-217ENST00000611848 K7EIM0 57 aa6.75□□□□□ -1.33
SMAD4-217ENST00000611848 OVOL1O14753 267 aa6.75□□□□□ -1.33
SMAD4-217ENST00000611848 GCGP01275 180 aa6.75□□□□□ -1.33
SMAD4-217ENST00000611848 IGLV2-8P01709 118 aa6.75□□□□□ -1.33
SMAD4-217ENST00000611848 S100A9P06702 114 aaKnown RBP6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms