RNA–Protein interactions for RNA: ENST00000603043.1

CDCA3-211, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 1,995 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-211ENST00000603043 U3KQE9 123 aa11.71□□□□□ -0.53
CDCA3-211ENST00000603043 ZNF785A8K8V0 405 aa11.7□□□□□ -0.54
CDCA3-211ENST00000603043 K7EIL1 84 aa11.7□□□□□ -0.54
CDCA3-211ENST00000603043 PPP1R2P9O14990 202 aa11.7□□□□□ -0.54
CDCA3-211ENST00000603043 NUTF2P61970 127 aaKnown RBP11.7□□□□□ -0.54
CDCA3-211ENST00000603043 RAB31Q13636 194 aa11.7□□□□□ -0.54
CDCA3-211ENST00000603043 RPL7L1Q6DKI1 246 aaKnown RBP11.7□□□□□ -0.54
CDCA3-211ENST00000603043 DFFBO76075 338 aa11.7□□□□□ -0.54
CDCA3-211ENST00000603043 LINC00869P0C866 280 aa11.7□□□□□ -0.54
CDCA3-211ENST00000603043 ORM2P19652 201 aa11.7□□□□□ -0.54
CDCA3-211ENST00000603043 CDPF1Q6NVV7 123 aa11.7□□□□□ -0.54
CDCA3-211ENST00000603043 TCF24Q7RTU0 167 aa11.7□□□□□ -0.54
CDCA3-211ENST00000603043 GTSCR1Q86UQ5 136 aa11.7□□□□□ -0.54
CDCA3-211ENST00000603043 MRAPQ8TCY5 172 aa11.7□□□□□ -0.54
CDCA3-211ENST00000603043 SPAG8Q99932 426 aaPredicted RBP11.7□□□□□ -0.54
CDCA3-211ENST00000603043 SLC35B3Q9H1N7 401 aa11.7□□□□□ -0.54
CDCA3-211ENST00000603043 A0A087WWC5 75 aa11.69□□□□□ -0.54
CDCA3-211ENST00000603043 CAMLGP49069 296 aa11.69□□□□□ -0.54
CDCA3-211ENST00000603043 HIST3H2BBQ8N257 126 aa11.69□□□□□ -0.54
CDCA3-211ENST00000603043 OR1B1Q8NGR6 318 aa11.69□□□□□ -0.54
CDCA3-211ENST00000603043 SCRT1Q9BWW7 348 aa11.69□□□□□ -0.54
CDCA3-211ENST00000603043 BUB3O43684 328 aa11.68□□□□□ -0.54
CDCA3-211ENST00000603043 FGF7P21781 194 aa11.68□□□□□ -0.54
CDCA3-211ENST00000603043 RPL11P62913 178 aaKnown RBP11.68□□□□□ -0.54
CDCA3-211ENST00000603043 FAM90A2PQ658T7 463 aa11.68□□□□□ -0.54
CDCA3-211ENST00000603043 GGTLC1Q9BX51 225 aa11.68□□□□□ -0.54
CDCA3-211ENST00000603043 SLC45A2Q9UMX9 530 aa11.68□□□□□ -0.54
CDCA3-211ENST00000603043 IGKV3-7A0A075B6H7 116 aa11.68□□□□□ -0.54
CDCA3-211ENST00000603043 MPDU1O75352 247 aa11.68□□□□□ -0.54
CDCA3-211ENST00000603043 ANKRD39Q53RE8 183 aa11.68□□□□□ -0.54
CDCA3-211ENST00000603043 ATP5SQ99766 215 aa11.68□□□□□ -0.54
CDCA3-211ENST00000603043 SMIM3Q9BZL3 60 aa11.68□□□□□ -0.54
CDCA3-211ENST00000603043 EIF5A2Q9GZV4 153 aaKnown RBP11.68□□□□□ -0.54
CDCA3-211ENST00000603043 SEC11BP0C7V7 166 aa11.67□□□□□ -0.54
CDCA3-211ENST00000603043 PLP1P60201 277 aa11.67□□□□□ -0.54
CDCA3-211ENST00000603043 ZNF674Q2M3X9 581 aa11.67□□□□□ -0.54
CDCA3-211ENST00000603043 C16orf54Q6UWD8 224 aa11.67□□□□□ -0.54
CDCA3-211ENST00000603043 STPG3Q8N7X2 389 aa11.67□□□□□ -0.54
CDCA3-211ENST00000603043 GLMPQ8WWB7 406 aa11.67□□□□□ -0.54
CDCA3-211ENST00000603043 NDUFAF3Q9BU61 184 aa11.67□□□□□ -0.54
CDCA3-211ENST00000603043 HYPMO75409 117 aa11.67□□□□□ -0.54
CDCA3-211ENST00000603043 CD7P09564 240 aa11.67□□□□□ -0.54
CDCA3-211ENST00000603043 S100A7P31151 101 aa11.67□□□□□ -0.54
CDCA3-211ENST00000603043 KHDC3LQ587J8 217 aa11.67□□□□□ -0.54
CDCA3-211ENST00000603043 DEFB121Q5J5C9 76 aa11.67□□□□□ -0.54
CDCA3-211ENST00000603043 NPCDR1Q9BY65 106 aa11.67□□□□□ -0.54
CDCA3-211ENST00000603043 ARV1Q9H2C2 271 aa11.67□□□□□ -0.54
CDCA3-211ENST00000603043 HELTA6NFD8 242 aa11.66□□□□□ -0.54
CDCA3-211ENST00000603043 OR4C46A6NHA9 309 aa11.66□□□□□ -0.54
CDCA3-211ENST00000603043 OR5G3P0C626 314 aa11.66□□□□□ -0.54
CDCA3-211ENST00000603043 PAFAH1B2P68402 229 aa11.66□□□□□ -0.54
CDCA3-211ENST00000603043 MIC13Q5XKP0 118 aa11.66□□□□□ -0.54
CDCA3-211ENST00000603043 Q8N1Y9 231 aa11.66□□□□□ -0.54
CDCA3-211ENST00000603043 GBGT1Q8N5D6 347 aa11.66□□□□□ -0.54
CDCA3-211ENST00000603043 WDR61Q9GZS3 305 aaKnown RBP11.66□□□□□ -0.54
CDCA3-211ENST00000603043 PLA2G2EQ9NZK7 142 aa11.66□□□□□ -0.54
CDCA3-211ENST00000603043 HIGD1AQ9Y241 93 aa11.66□□□□□ -0.54
CDCA3-211ENST00000603043 HIST1H2BKO60814 126 aa11.65□□□□□ -0.54
CDCA3-211ENST00000603043 HIST1H2BJP06899 126 aa11.65□□□□□ -0.54
CDCA3-211ENST00000603043 HIST1H2BOP23527 126 aa11.65□□□□□ -0.54
CDCA3-211ENST00000603043 HIST1H2BBP33778 126 aa11.65□□□□□ -0.54
CDCA3-211ENST00000603043 RPL29P47914 159 aaKnown RBP11.65□□□□□ -0.54
CDCA3-211ENST00000603043 TFPI2P48307 235 aa11.65□□□□□ -0.54
CDCA3-211ENST00000603043 HIST1H2BDP58876 126 aa11.65□□□□□ -0.54
CDCA3-211ENST00000603043 HIST1H2BCP62807 126 aa11.65□□□□□ -0.54
CDCA3-211ENST00000603043 PRR20EP86478 221 aa11.65□□□□□ -0.54
CDCA3-211ENST00000603043 PRR20CP86479 221 aa11.65□□□□□ -0.54
CDCA3-211ENST00000603043 PRR20DP86480 221 aa11.65□□□□□ -0.54
CDCA3-211ENST00000603043 PRR20BP86481 221 aa11.65□□□□□ -0.54
CDCA3-211ENST00000603043 PRR20AP86496 221 aa11.65□□□□□ -0.54
CDCA3-211ENST00000603043 HIST2H2BEQ16778 126 aa11.65□□□□□ -0.54
CDCA3-211ENST00000603043 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.65□□□□□ -0.54
CDCA3-211ENST00000603043 C1orf194Q5T5A4 169 aa11.65□□□□□ -0.54
CDCA3-211ENST00000603043 HIST1H2BHQ93079 126 aa11.65□□□□□ -0.54
CDCA3-211ENST00000603043 HIST1H2BNQ99877 126 aa11.65□□□□□ -0.54
CDCA3-211ENST00000603043 HIST1H2BMQ99879 126 aa11.65□□□□□ -0.54
CDCA3-211ENST00000603043 SMAD5-AS1Q9Y6J3 95 aa11.65□□□□□ -0.54
CDCA3-211ENST00000603043 BORCS7-ASMTA0A0B4J1R7 106 aa11.65□□□□□ -0.55
CDCA3-211ENST00000603043 SIGLEC15Q6ZMC9 328 aa11.65□□□□□ -0.55
CDCA3-211ENST00000603043 STXBP6Q8NFX7 210 aa11.65□□□□□ -0.55
CDCA3-211ENST00000603043 UHRF2Q96PU4 802 aa11.65□□□□□ -0.55
CDCA3-211ENST00000603043 SLC25A39Q9BZJ4 359 aaPredicted RBP11.65□□□□□ -0.55
CDCA3-211ENST00000603043 MS4A6AQ9H2W1 248 aa11.65□□□□□ -0.55
CDCA3-211ENST00000603043 PRO1933Q9H354 126 aa11.65□□□□□ -0.55
CDCA3-211ENST00000603043 SLC25A22Q9H936 323 aa11.65□□□□□ -0.55
CDCA3-211ENST00000603043 FBXL17Q9UF56 701 aa11.65□□□□□ -0.55
CDCA3-211ENST00000603043 IFNA5P01569 189 aa11.64□□□□□ -0.55
CDCA3-211ENST00000603043 SOHLH1Q5JUK2 328 aa11.64□□□□□ -0.55
CDCA3-211ENST00000603043 S100A7AQ86SG5 101 aa11.64□□□□□ -0.55
CDCA3-211ENST00000603043 OR8I2Q8N0Y5 310 aa11.64□□□□□ -0.55
CDCA3-211ENST00000603043 WFDC1Q9HC57 220 aa11.64□□□□□ -0.55
CDCA3-211ENST00000603043 SLC39A9Q9NUM3 307 aa11.64□□□□□ -0.55
CDCA3-211ENST00000603043 PXMP4Q9Y6I8 212 aa11.64□□□□□ -0.55
CDCA3-211ENST00000603043 H3BRN7 92 aa11.63□□□□□ -0.55
CDCA3-211ENST00000603043 COX7A2P2O60397 106 aa11.63□□□□□ -0.55
CDCA3-211ENST00000603043 PATE2Q6UY27 113 aa11.63□□□□□ -0.55
CDCA3-211ENST00000603043 WFDC3Q8IUB2 231 aa11.63□□□□□ -0.55
CDCA3-211ENST00000603043 ZNF709Q8N972 641 aa11.63□□□□□ -0.55
CDCA3-211ENST00000603043 SHANK2-AS3Q9BTD1 123 aa11.63□□□□□ -0.55
CDCA3-211ENST00000603043 PRKDCP78527 4128 aaKnown RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms