RNA–Protein interactions for RNA: ENST00000602029.1

VRK3-226, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 578 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-226ENST00000602029 ZFP92A6NM28 416 aa3.89□□□□□ -1.79
VRK3-226ENST00000602029 LINC00473A8K010 186 aa3.89□□□□□ -1.79
VRK3-226ENST00000602029 CEBPZOSA8MTT3 80 aa3.89□□□□□ -1.79
VRK3-226ENST00000602029 PRSS46E5RG02 174 aa3.89□□□□□ -1.79
VRK3-226ENST00000602029 H3BP45 60 aa3.89□□□□□ -1.79
VRK3-226ENST00000602029 H7BYZ3 331 aa3.89□□□□□ -1.79
VRK3-226ENST00000602029 CLN5O75503 358 aa3.89□□□□□ -1.79
VRK3-226ENST00000602029 RBMXL2O75526 392 aaKnown RBP3.89□□□□□ -1.79
VRK3-226ENST00000602029 CXorf1O96002 111 aa3.89□□□□□ -1.79
VRK3-226ENST00000602029 KRASP01116 189 aa3.89□□□□□ -1.79
VRK3-226ENST00000602029 IGLV2-23P01705 113 aa3.89□□□□□ -1.79
VRK3-226ENST00000602029 AREGP15514 252 aa3.89□□□□□ -1.79
VRK3-226ENST00000602029 CBLN1P23435 193 aa3.89□□□□□ -1.79
VRK3-226ENST00000602029 GPR183P32249 361 aa3.89□□□□□ -1.79
VRK3-226ENST00000602029 BMI1P35226 326 aa3.89□□□□□ -1.79
VRK3-226ENST00000602029 G6PCP35575 357 aa3.89□□□□□ -1.79
VRK3-226ENST00000602029 RPL27AP46776 148 aaKnown RBP3.89□□□□□ -1.79
VRK3-226ENST00000602029 RPS10P46783 165 aaKnown RBP3.89□□□□□ -1.79
VRK3-226ENST00000602029 RPL29P47914 159 aaKnown RBP3.89□□□□□ -1.79
VRK3-226ENST00000602029 TFPI2P48307 235 aa3.89□□□□□ -1.79
VRK3-226ENST00000602029 RHOBP62745 196 aa3.89□□□□□ -1.79
VRK3-226ENST00000602029 RPL30P62888 115 aaKnown RBP3.89□□□□□ -1.79
VRK3-226ENST00000602029 ARL16Q0P5N6 197 aa3.89□□□□□ -1.79
VRK3-226ENST00000602029 ZNF726P1Q15940 193 aa3.89□□□□□ -1.79
VRK3-226ENST00000602029 LBHQ53QV2 105 aaPredicted RBP3.89□□□□□ -1.79
VRK3-226ENST00000602029 FFAR4Q5NUL3 377 aa3.89□□□□□ -1.79
VRK3-226ENST00000602029 TEPPQ6URK8 271 aa3.89□□□□□ -1.79
VRK3-226ENST00000602029 C19orf35Q6ZS72 473 aa3.89□□□□□ -1.79
VRK3-226ENST00000602029 VKORC1L1Q8N0U8 176 aa3.89□□□□□ -1.79
VRK3-226ENST00000602029 OR4A5Q8NH83 315 aa3.89□□□□□ -1.79
VRK3-226ENST00000602029 VSTM2AQ8TAG5 236 aa3.89□□□□□ -1.79
VRK3-226ENST00000602029 OSR1Q8TAX0 266 aaPredicted RBP3.89□□□□□ -1.79
VRK3-226ENST00000602029 RNASEH2CQ8TDP1 164 aaKnown RBP3.89□□□□□ -1.79
VRK3-226ENST00000602029 C2CD4CQ8TF44 421 aa3.89□□□□□ -1.79
VRK3-226ENST00000602029 PHLDA1Q8WV24 401 aaPredicted RBP3.89□□□□□ -1.79
VRK3-226ENST00000602029 C11orf52Q96A22 123 aa3.89□□□□□ -1.79
VRK3-226ENST00000602029 ISOC2Q96AB3 205 aa3.89□□□□□ -1.79
VRK3-226ENST00000602029 RPUSD4Q96CM3 377 aaKnown RBP3.89□□□□□ -1.79
VRK3-226ENST00000602029 FAM210BQ96KR6 192 aa3.89□□□□□ -1.79
VRK3-226ENST00000602029 HINT2Q9BX68 163 aa3.89□□□□□ -1.79
VRK3-226ENST00000602029 TMEM14BQ9NUH8 114 aa3.89□□□□□ -1.79
VRK3-226ENST00000602029 UFC1Q9Y3C8 167 aa3.89□□□□□ -1.79
VRK3-226ENST00000602029 DMRT1Q9Y5R6 373 aa3.89□□□□□ -1.79
VRK3-226ENST00000602029 IGHV3OR16-8A0A075B7F1 116 aa3.88□□□□□ -1.79
VRK3-226ENST00000602029 TRBV9A0A0B4J1U6 114 aa3.88□□□□□ -1.79
VRK3-226ENST00000602029 OR4C46A6NHA9 309 aa3.88□□□□□ -1.79
VRK3-226ENST00000602029 SRRM4A7MD48 611 aaKnown RBP3.88□□□□□ -1.79
VRK3-226ENST00000602029 C15orf62A8K5M9 175 aa3.88□□□□□ -1.79
VRK3-226ENST00000602029 C9JCJ5 164 aa3.88□□□□□ -1.79
VRK3-226ENST00000602029 ZNF207O43670 478 aaKnown RBP3.88□□□□□ -1.79
VRK3-226ENST00000602029 GATCO43716 136 aaKnown RBP3.88□□□□□ -1.79
VRK3-226ENST00000602029 HIST1H2BKO60814 126 aa3.88□□□□□ -1.79
VRK3-226ENST00000602029 YIF1AO95070 293 aa3.88□□□□□ -1.79
VRK3-226ENST00000602029 IFNA10P01566 189 aa3.88□□□□□ -1.79
VRK3-226ENST00000602029 HIST1H2BJP06899 126 aa3.88□□□□□ -1.79
VRK3-226ENST00000602029 FABP1P07148 127 aa3.88□□□□□ -1.79
VRK3-226ENST00000602029 PFN1P07737 140 aaKnown RBP3.88□□□□□ -1.79
VRK3-226ENST00000602029 IL6RP08887 468 aaPredicted RBP3.88□□□□□ -1.79
VRK3-226ENST00000602029 STAG3L2P0CL84 134 aa3.88□□□□□ -1.79
VRK3-226ENST00000602029 STAG3L3P0CL85 134 aa3.88□□□□□ -1.79
VRK3-226ENST00000602029 MYOD1P15172 320 aa3.88□□□□□ -1.79
VRK3-226ENST00000602029 HIST1H1BP16401 226 aaKnown RBP3.88□□□□□ -1.79
VRK3-226ENST00000602029 HIST1H2BOP23527 126 aa3.88□□□□□ -1.79
VRK3-226ENST00000602029 HIST1H2BBP33778 126 aa3.88□□□□□ -1.79
VRK3-226ENST00000602029 HIST1H2BDP58876 126 aa3.88□□□□□ -1.79
VRK3-226ENST00000602029 BRWD1-AS2P59051 145 aa3.88□□□□□ -1.79
VRK3-226ENST00000602029 HSPE1P61604 102 aaKnown RBP3.88□□□□□ -1.79
VRK3-226ENST00000602029 HIST1H2BCP62807 126 aa3.88□□□□□ -1.79
VRK3-226ENST00000602029 RPL11P62913 178 aaKnown RBP3.88□□□□□ -1.79
VRK3-226ENST00000602029 PRCDQ00LT1 54 aa3.88□□□□□ -1.79
VRK3-226ENST00000602029 HIST2H2BEQ16778 126 aa3.88□□□□□ -1.79
VRK3-226ENST00000602029 ZNF674Q2M3X9 581 aa3.88□□□□□ -1.79
VRK3-226ENST00000602029 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.88□□□□□ -1.79
VRK3-226ENST00000602029 OR8G2PQ6IF36 304 aa3.88□□□□□ -1.79
VRK3-226ENST00000602029 LCN15Q6UWW0 184 aa3.88□□□□□ -1.79
VRK3-226ENST00000602029 TMEM183AQ8IXX5 376 aa3.88□□□□□ -1.79
VRK3-226ENST00000602029 OR51G1Q8NGK1 321 aa3.88□□□□□ -1.79
VRK3-226ENST00000602029 OR1L8Q8NGR8 309 aa3.88□□□□□ -1.79
VRK3-226ENST00000602029 HIST1H2BHQ93079 126 aa3.88□□□□□ -1.79
VRK3-226ENST00000602029 RAB24Q969Q5 203 aa3.88□□□□□ -1.79
VRK3-226ENST00000602029 SMIM12Q96EX1 92 aa3.88□□□□□ -1.79
VRK3-226ENST00000602029 C5orf30Q96GV9 206 aa3.88□□□□□ -1.79
VRK3-226ENST00000602029 PACRGQ96M98 296 aaPredicted RBP3.88□□□□□ -1.79
VRK3-226ENST00000602029 UHRF2Q96PU4 802 aa3.88□□□□□ -1.79
VRK3-226ENST00000602029 HIST1H2BNQ99877 126 aa3.88□□□□□ -1.79
VRK3-226ENST00000602029 HIST1H2BMQ99879 126 aa3.88□□□□□ -1.79
VRK3-226ENST00000602029 MRPL32Q9BYC8 188 aaKnown RBP3.88□□□□□ -1.79
VRK3-226ENST00000602029 PARLQ9H300 379 aa3.88□□□□□ -1.79
VRK3-226ENST00000602029 ENY2Q9NPA8 101 aa3.88□□□□□ -1.79
VRK3-226ENST00000602029 HEYLQ9NQ87 328 aaPredicted RBP3.88□□□□□ -1.79
VRK3-226ENST00000602029 TMEM167BQ9NRX6 74 aa3.88□□□□□ -1.79
VRK3-226ENST00000602029 BET1LQ9NYM9 111 aa3.88□□□□□ -1.79
VRK3-226ENST00000602029 THYN1Q9P016 225 aa3.88□□□□□ -1.79
VRK3-226ENST00000602029 SORL1Q92673 2214 aa3.88□□□□□ -1.79
VRK3-226ENST00000602029 IGHV3-21A0A0B4J1V1 117 aa3.87□□□□□ -1.79
VRK3-226ENST00000602029 TMEM213A2RRL7 107 aa3.87□□□□□ -1.79
VRK3-226ENST00000602029 IGLL5B9A064 214 aa3.87□□□□□ -1.79
VRK3-226ENST00000602029 C11orf94C9JXX5 98 aa3.87□□□□□ -1.79
VRK3-226ENST00000602029 LGALS9O00182 355 aa3.87□□□□□ -1.79
VRK3-226ENST00000602029 DEFB4AO15263 64 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms