RNA–Protein interactions for RNA: ENST00000601685.1

CAPN12-211, Transcript of calpain 12, human

Gene CAPN12, Length 2,552 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAPN12-211	ENST00000601685	SCNM1	Q9BWG6	230 aa		13.13	□□□□□ -0.31
CAPN12-211	ENST00000601685	SIGLEC9	Q9Y336	463 aa		13.13	□□□□□ -0.31
CAPN12-211	ENST00000601685	OTOGL	Q3ZCN5	2332 aa		13.13	□□□□□ -0.31
CAPN12-211	ENST00000601685		A1L4Q6	167 aa		13.13	□□□□□ -0.31
CAPN12-211	ENST00000601685	TEX22	C9J3V5	150 aa		13.13	□□□□□ -0.31
CAPN12-211	ENST00000601685	TMEM178B	H3BS89	294 aa		13.13	□□□□□ -0.31
CAPN12-211	ENST00000601685	TNFRSF13B	O14836	293 aa	Predicted RBP	13.13	□□□□□ -0.31
CAPN12-211	ENST00000601685	C1orf185	Q5T7R7	199 aa		13.13	□□□□□ -0.31
CAPN12-211	ENST00000601685	RASL11B	Q9BPW5	248 aa		13.13	□□□□□ -0.31
CAPN12-211	ENST00000601685		G3V4G9	280 aa		13.12	□□□□□ -0.31
CAPN12-211	ENST00000601685	LOX	P28300	417 aa	Predicted RBP	13.12	□□□□□ -0.31
CAPN12-211	ENST00000601685	S100A7	P31151	101 aa		13.12	□□□□□ -0.31
CAPN12-211	ENST00000601685	CACNG7	P62955	275 aa		13.12	□□□□□ -0.31
CAPN12-211	ENST00000601685	THYN1	Q9P016	225 aa		13.12	□□□□□ -0.31
CAPN12-211	ENST00000601685	PLXNB1	O43157	2135 aa		13.12	□□□□□ -0.31
CAPN12-211	ENST00000601685		A0A0G2JLM5	398 aa		13.12	□□□□□ -0.31
CAPN12-211	ENST00000601685	SERTM2	A0A1B0GWG4	89 aa		13.12	□□□□□ -0.31
CAPN12-211	ENST00000601685		I3L2K1	104 aa		13.12	□□□□□ -0.31
CAPN12-211	ENST00000601685	RBP4	P02753	201 aa		13.12	□□□□□ -0.31
CAPN12-211	ENST00000601685	RIPPLY3	P57055	190 aa		13.12	□□□□□ -0.31
CAPN12-211	ENST00000601685	ADAMTSL5	Q6ZMM2	481 aa		13.12	□□□□□ -0.31
CAPN12-211	ENST00000601685	LYPD1	Q8N2G4	141 aa		13.12	□□□□□ -0.31
CAPN12-211	ENST00000601685	PRELID3A	Q96N28	172 aa		13.12	□□□□□ -0.31
CAPN12-211	ENST00000601685	SHANK2-AS3	Q9BTD1	123 aa		13.12	□□□□□ -0.31
CAPN12-211	ENST00000601685	TMEM133	Q9H2Q1	129 aa		13.12	□□□□□ -0.31
CAPN12-211	ENST00000601685	HILPDA	Q9Y5L2	63 aa		13.12	□□□□□ -0.31
CAPN12-211	ENST00000601685	IGHV1-8	P0DP01	117 aa		13.11	□□□□□ -0.31
CAPN12-211	ENST00000601685	TMEM155	Q4W5P6	130 aa		13.11	□□□□□ -0.31
CAPN12-211	ENST00000601685	FAM104B	Q5XKR9	115 aa		13.11	□□□□□ -0.31
CAPN12-211	ENST00000601685	OR4X2	Q8NGF9	303 aa		13.11	□□□□□ -0.31
CAPN12-211	ENST00000601685	OR2K2	Q8NGT1	345 aa		13.11	□□□□□ -0.31
CAPN12-211	ENST00000601685	CTSZ	Q9UBR2	303 aa		13.11	□□□□□ -0.31
CAPN12-211	ENST00000601685		H3BRN7	92 aa		13.1	□□□□□ -0.31
CAPN12-211	ENST00000601685	IGKV1-17	P01599	117 aa		13.1	□□□□□ -0.31
CAPN12-211	ENST00000601685	PAX8	Q06710	450 aa		13.1	□□□□□ -0.31
CAPN12-211	ENST00000601685	AMN1	Q8IY45	258 aa		13.1	□□□□□ -0.31
CAPN12-211	ENST00000601685	ORMDL3	Q8N138	153 aa		13.1	□□□□□ -0.31
CAPN12-211	ENST00000601685	NAA38	Q9BRA0	125 aa	Known RBP	13.1	□□□□□ -0.31
CAPN12-211	ENST00000601685	TMEM213	A2RRL7	107 aa		13.1	□□□□□ -0.31
CAPN12-211	ENST00000601685	TMEM238	C9JI98	176 aa		13.1	□□□□□ -0.31
CAPN12-211	ENST00000601685	HBD	P02042	147 aa		13.1	□□□□□ -0.31
CAPN12-211	ENST00000601685	PRB4	P10163	310 aa	Predicted RBP	13.1	□□□□□ -0.31
CAPN12-211	ENST00000601685	ADIPOQ	Q15848	244 aa		13.1	□□□□□ -0.31
CAPN12-211	ENST00000601685	LYZL1	Q6UWQ5	148 aa		13.1	□□□□□ -0.31
CAPN12-211	ENST00000601685	NEGR1	Q7Z3B1	354 aa		13.1	□□□□□ -0.31
CAPN12-211	ENST00000601685	PPP1R27	Q86WC6	154 aa		13.1	□□□□□ -0.31
CAPN12-211	ENST00000601685	COL25A1	Q9BXS0	654 aa	Predicted RBP	13.1	□□□□□ -0.31
CAPN12-211	ENST00000601685		K7EM74	188 aa		13.09	□□□□□ -0.31
CAPN12-211	ENST00000601685	CCL17	Q92583	94 aa		13.09	□□□□□ -0.31
CAPN12-211	ENST00000601685	ZNF414	Q96IQ9	312 aa		13.09	□□□□□ -0.31
CAPN12-211	ENST00000601685	C8orf49	Q96NF6	230 aa		13.09	□□□□□ -0.31
CAPN12-211	ENST00000601685	INSIG2	Q9Y5U4	225 aa		13.09	□□□□□ -0.31
CAPN12-211	ENST00000601685	TCTA	P57738	103 aa		13.09	□□□□□ -0.31
CAPN12-211	ENST00000601685	ASCL5	Q7RTU5	278 aa		13.09	□□□□□ -0.31
CAPN12-211	ENST00000601685	ABHD17A	Q96GS6	310 aa		13.09	□□□□□ -0.31
CAPN12-211	ENST00000601685	CT45A10	P0DMU9	189 aa		13.08	□□□□□ -0.32
CAPN12-211	ENST00000601685	IGFL3	Q6UXB1	125 aa		13.08	□□□□□ -0.32
CAPN12-211	ENST00000601685	IFI27L1	Q96BM0	104 aa		13.08	□□□□□ -0.32
CAPN12-211	ENST00000601685	SELENOK	Q9Y6D0	94 aa		13.08	□□□□□ -0.32
CAPN12-211	ENST00000601685	ADGRG4	Q8IZF6	3080 aa		13.08	□□□□□ -0.32
CAPN12-211	ENST00000601685	MRPS12	O15235	138 aa	Known RBP	13.08	□□□□□ -0.32
CAPN12-211	ENST00000601685	FXYD7	P58549	80 aa		13.08	□□□□□ -0.32
CAPN12-211	ENST00000601685	MRPL51	Q4U2R6	128 aa	Known RBP	13.08	□□□□□ -0.32
CAPN12-211	ENST00000601685	TMEM108	Q6UXF1	575 aa		13.08	□□□□□ -0.32
CAPN12-211	ENST00000601685		Q6ZS92	163 aa		13.08	□□□□□ -0.32
CAPN12-211	ENST00000601685	OR5A1	Q8NGJ0	315 aa		13.08	□□□□□ -0.32
CAPN12-211	ENST00000601685	RAB37	Q96AX2	223 aa		13.08	□□□□□ -0.32
CAPN12-211	ENST00000601685	JKAMP	Q9P055	326 aa		13.08	□□□□□ -0.32
CAPN12-211	ENST00000601685		A0A1W2PPM0	123 aa		13.07	□□□□□ -0.32
CAPN12-211	ENST00000601685	TMEM189	A5PLL7	270 aa		13.07	□□□□□ -0.32
CAPN12-211	ENST00000601685		M0R3E3	92 aa		13.07	□□□□□ -0.32
CAPN12-211	ENST00000601685	PKDREJ	Q9NTG1	2253 aa		13.07	□□□□□ -0.32
CAPN12-211	ENST00000601685	PCP2	Q8IVA1	136 aa		13.07	□□□□□ -0.32
CAPN12-211	ENST00000601685	PRSS33	Q8NF86	280 aa		13.07	□□□□□ -0.32
CAPN12-211	ENST00000601685	CEACAM3	P40198	252 aa		13.06	□□□□□ -0.32
CAPN12-211	ENST00000601685	TNFRSF14	Q92956	283 aa		13.06	□□□□□ -0.32
CAPN12-211	ENST00000601685	FBXL15	Q9H469	300 aa		13.06	□□□□□ -0.32
CAPN12-211	ENST00000601685	SPCS1	Q9Y6A9	102 aa		13.06	□□□□□ -0.32
CAPN12-211	ENST00000601685	TMSB15B	A0A087X1C1	80 aa		13.06	□□□□□ -0.32
CAPN12-211	ENST00000601685	IGHV1-3	A0A0C4DH29	117 aa		13.06	□□□□□ -0.32
CAPN12-211	ENST00000601685	NMU	P48645	174 aa		13.06	□□□□□ -0.32
CAPN12-211	ENST00000601685	WFDC8	Q8IUA0	241 aa		13.06	□□□□□ -0.32
CAPN12-211	ENST00000601685	ZNF491	Q8N8L2	437 aa		13.06	□□□□□ -0.32
CAPN12-211	ENST00000601685	KAAG1	Q9UBP8	84 aa		13.06	□□□□□ -0.32
CAPN12-211	ENST00000601685	PCNX1	Q96RV3	2341 aa		13.05	□□□□□ -0.32
CAPN12-211	ENST00000601685		K7EIM0	57 aa		13.05	□□□□□ -0.32
CAPN12-211	ENST00000601685	SH2D1A	O60880	128 aa		13.05	□□□□□ -0.32
CAPN12-211	ENST00000601685	NDUFS7	O75251	213 aa		13.05	□□□□□ -0.32
CAPN12-211	ENST00000601685	PRSS57	Q6UWY2	283 aa		13.05	□□□□□ -0.32
CAPN12-211	ENST00000601685	NPFFR1	Q9GZQ6	430 aa		13.05	□□□□□ -0.32
CAPN12-211	ENST00000601685	DMXL2	Q8TDJ6	3036 aa		13.05	□□□□□ -0.32
CAPN12-211	ENST00000601685	IGLV1-47	P01700	117 aa		13.05	□□□□□ -0.32
CAPN12-211	ENST00000601685	NPY	P01303	97 aa		13.04	□□□□□ -0.32
CAPN12-211	ENST00000601685	THBD	P07204	575 aa		13.04	□□□□□ -0.32
CAPN12-211	ENST00000601685	RNF125	Q96EQ8	232 aa		13.04	□□□□□ -0.32
CAPN12-211	ENST00000601685	DLX1	P56177	255 aa		13.04	□□□□□ -0.32
CAPN12-211	ENST00000601685	DKK2	Q9UBU2	259 aa		13.04	□□□□□ -0.32
CAPN12-211	ENST00000601685	IL4	P05112	153 aa		13.03	□□□□□ -0.32
CAPN12-211	ENST00000601685	FCGR2B	P31994	310 aa	Predicted RBP	13.03	□□□□□ -0.32
CAPN12-211	ENST00000601685	CKS2	P33552	79 aa		13.03	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms