RNA–Protein interactions for RNA: ENST00000600453.1

IRF3-226, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 700 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-226ENST00000600453 UQCC1Q9NVA1 299 aa11.25□□□□□ -0.61
IRF3-226ENST00000600453 PPP1R14DQ9NXH3 145 aa11.25□□□□□ -0.61
IRF3-226ENST00000600453 FAM24AA6NFZ4 105 aa11.24□□□□□ -0.61
IRF3-226ENST00000600453 CST7O76096 145 aa11.24□□□□□ -0.61
IRF3-226ENST00000600453 RLN2P04090 185 aa11.24□□□□□ -0.61
IRF3-226ENST00000600453 CXCL3P19876 107 aa11.24□□□□□ -0.61
IRF3-226ENST00000600453 CNN1P51911 297 aaKnown RBP11.24□□□□□ -0.61
IRF3-226ENST00000600453 S100A10P60903 97 aa11.24□□□□□ -0.61
IRF3-226ENST00000600453 IL15RAQ13261 267 aa11.24□□□□□ -0.61
IRF3-226ENST00000600453 PSG3Q16557 428 aa11.24□□□□□ -0.61
IRF3-226ENST00000600453 C10orf113Q5VZT2 155 aa11.24□□□□□ -0.61
IRF3-226ENST00000600453 LCN15Q6UWW0 184 aa11.24□□□□□ -0.61
IRF3-226ENST00000600453 OR1L4Q8NGR5 311 aa11.24□□□□□ -0.61
IRF3-226ENST00000600453 MGST2Q99735 147 aa11.24□□□□□ -0.61
IRF3-226ENST00000600453 SLC50A1Q9BRV3 221 aa11.24□□□□□ -0.61
IRF3-226ENST00000600453 PLECQ15149 4684 aaKnown RBP11.24□□□□□ -0.61
IRF3-226ENST00000600453 IGHV4-4A0A075B6R2 117 aa11.23□□□□□ -0.61
IRF3-226ENST00000600453 PRAF2O60831 178 aa11.23□□□□□ -0.61
IRF3-226ENST00000600453 EMP1P54849 157 aa11.23□□□□□ -0.61
IRF3-226ENST00000600453 CYCSP99999 105 aaKnown RBP11.23□□□□□ -0.61
IRF3-226ENST00000600453 IGFL4Q6B9Z1 124 aa11.23□□□□□ -0.61
IRF3-226ENST00000600453 AMTNQ6UX39 209 aa11.23□□□□□ -0.61
IRF3-226ENST00000600453 C1orf158Q8N1D5 194 aa11.23□□□□□ -0.61
IRF3-226ENST00000600453 RNF182Q8N6D2 247 aa11.23□□□□□ -0.61
IRF3-226ENST00000600453 TMEM252Q8N6L7 170 aa11.23□□□□□ -0.61
IRF3-226ENST00000600453 OR11H7Q8NGC8 314 aa11.23□□□□□ -0.61
IRF3-226ENST00000600453 PFDN5Q99471 154 aa11.23□□□□□ -0.61
IRF3-226ENST00000600453 MARVELD1Q9BSK0 173 aa11.23□□□□□ -0.61
IRF3-226ENST00000600453 C11orf1Q9H5F2 150 aa11.23□□□□□ -0.61
IRF3-226ENST00000600453 CELA1Q9UNI1 258 aa11.23□□□□□ -0.61
IRF3-226ENST00000600453 ALMS1Q8TCU4 4167 aa11.23□□□□□ -0.61
IRF3-226ENST00000600453 INSP01308 110 aa11.22□□□□□ -0.61
IRF3-226ENST00000600453 RPL29P47914 159 aaKnown RBP11.22□□□□□ -0.61
IRF3-226ENST00000600453 RHOBP62745 196 aa11.22□□□□□ -0.61
IRF3-226ENST00000600453 RAB32Q13637 225 aa11.22□□□□□ -0.61
IRF3-226ENST00000600453 VWC2Q2TAL6 325 aa11.22□□□□□ -0.61
IRF3-226ENST00000600453 OR8A1Q8NGG7 326 aa11.22□□□□□ -0.61
IRF3-226ENST00000600453 CHAC2Q8WUX2 184 aa11.22□□□□□ -0.61
IRF3-226ENST00000600453 TMEM37Q8WXS4 190 aa11.22□□□□□ -0.61
IRF3-226ENST00000600453 FAM210BQ96KR6 192 aa11.22□□□□□ -0.61
IRF3-226ENST00000600453 NDUFAF3Q9BU61 184 aa11.22□□□□□ -0.61
IRF3-226ENST00000600453 WDR83OSQ9Y284 106 aa11.22□□□□□ -0.61
IRF3-226ENST00000600453 LOC102723971A0A1B0GUV8 181 aa11.21□□□□□ -0.61
IRF3-226ENST00000600453 MRPS12O15235 138 aaKnown RBP11.21□□□□□ -0.61
IRF3-226ENST00000600453 MPDU1O75352 247 aa11.21□□□□□ -0.61
IRF3-226ENST00000600453 HIST1H1AQ02539 215 aaPredicted RBP11.21□□□□□ -0.61
IRF3-226ENST00000600453 BAXQ07812 192 aa11.21□□□□□ -0.61
IRF3-226ENST00000600453 GUK1Q16774 197 aa11.21□□□□□ -0.61
IRF3-226ENST00000600453 RPUSD4Q96CM3 377 aaKnown RBP11.21□□□□□ -0.61
IRF3-226ENST00000600453 NIPSNAP3BQ9BS92 247 aa11.21□□□□□ -0.61
IRF3-226ENST00000600453 SLC25A31Q9H0C2 315 aa11.21□□□□□ -0.61
IRF3-226ENST00000600453 DKK2Q9UBU2 259 aa11.21□□□□□ -0.61
IRF3-226ENST00000600453 PXMP4Q9Y6I8 212 aa11.21□□□□□ -0.61
IRF3-226ENST00000600453 PRR20EP86478 221 aa11.2□□□□□ -0.62
IRF3-226ENST00000600453 PRR20CP86479 221 aa11.2□□□□□ -0.62
IRF3-226ENST00000600453 PRR20DP86480 221 aa11.2□□□□□ -0.62
IRF3-226ENST00000600453 PRR20BP86481 221 aa11.2□□□□□ -0.62
IRF3-226ENST00000600453 PRR20AP86496 221 aa11.2□□□□□ -0.62
IRF3-226ENST00000600453 SPINK13Q1W4C9 94 aa11.2□□□□□ -0.62
IRF3-226ENST00000600453 MIC13Q5XKP0 118 aa11.2□□□□□ -0.62
IRF3-226ENST00000600453 TMEM256Q8N2U0 113 aa11.2□□□□□ -0.62
IRF3-226ENST00000600453 NMES1Q9C002 83 aa11.2□□□□□ -0.62
IRF3-226ENST00000600453 ZNF331Q9NQX6 463 aaPredicted RBP11.2□□□□□ -0.62
IRF3-226ENST00000600453 E5RGE8 158 aa11.19□□□□□ -0.62
IRF3-226ENST00000600453 INMT-MINDY4F8WBC2 141 aa11.19□□□□□ -0.62
IRF3-226ENST00000600453 BOLA2-SMG1P6H3BVE0 249 aa11.19□□□□□ -0.62
IRF3-226ENST00000600453 P0DMU3 169 aa11.19□□□□□ -0.62
IRF3-226ENST00000600453 FAM231AP0DMU4 169 aa11.19□□□□□ -0.62
IRF3-226ENST00000600453 FAM231CP0DMU5 169 aa11.19□□□□□ -0.62
IRF3-226ENST00000600453 FAM222AQ5U5X8 452 aa11.19□□□□□ -0.62
IRF3-226ENST00000600453 ZNF767PQ75MW2 155 aa11.19□□□□□ -0.62
IRF3-226ENST00000600453 RPP25LQ8N5L8 163 aaKnown RBP11.19□□□□□ -0.62
IRF3-226ENST00000600453 SLC39A9Q9NUM3 307 aa11.19□□□□□ -0.62
IRF3-226ENST00000600453 YTHDF2Q9Y5A9 579 aaKnown RBP11.19□□□□□ -0.62
IRF3-226ENST00000600453 IGSF23A1L1A6 192 aa11.18□□□□□ -0.62
IRF3-226ENST00000600453 M0R2Z0 102 aa11.18□□□□□ -0.62
IRF3-226ENST00000600453 CRXO43186 299 aaPredicted RBP11.18□□□□□ -0.62
IRF3-226ENST00000600453 PFDN1O60925 122 aa11.18□□□□□ -0.62
IRF3-226ENST00000600453 TSPOP30536 169 aa11.18□□□□□ -0.62
IRF3-226ENST00000600453 OPCMLQ14982 345 aa11.18□□□□□ -0.62
IRF3-226ENST00000600453 OR10J6PQ8NGY7 276 aa11.18□□□□□ -0.62
IRF3-226ENST00000600453 UBE2L5PA0A1B0GUS4 154 aa11.17□□□□□ -0.62
IRF3-226ENST00000600453 A0A1B0GVG6 124 aa11.17□□□□□ -0.62
IRF3-226ENST00000600453 LYRM9A8MSI8 78 aa11.17□□□□□ -0.62
IRF3-226ENST00000600453 IGLC2P0DOY2 106 aa11.17□□□□□ -0.62
IRF3-226ENST00000600453 FGF7P21781 194 aa11.17□□□□□ -0.62
IRF3-226ENST00000600453 CDKN1BP46527 198 aa11.17□□□□□ -0.62
IRF3-226ENST00000600453 DAD1P61803 113 aa11.17□□□□□ -0.62
IRF3-226ENST00000600453 LINC01587Q99440 93 aa11.17□□□□□ -0.62
IRF3-226ENST00000600453 HYDINQ4G0P3 5121 aa11.17□□□□□ -0.62
IRF3-226ENST00000600453 ZNF253O75346 499 aa11.16□□□□□ -0.62
IRF3-226ENST00000600453 TAS2R60P59551 318 aa11.16□□□□□ -0.62
IRF3-226ENST00000600453 SAT2Q96F10 170 aaPredicted RBP11.16□□□□□ -0.62
IRF3-226ENST00000600453 C20orf144Q9BQM9 153 aa11.16□□□□□ -0.62
IRF3-226ENST00000600453 TRAV12-2A0A075B6T6 113 aa11.15□□□□□ -0.62
IRF3-226ENST00000600453 ZNF705GA8MUZ8 300 aaPredicted RBP11.15□□□□□ -0.62
IRF3-226ENST00000600453 SIX6O95475 246 aa11.15□□□□□ -0.62
IRF3-226ENST00000600453 NHLH2Q02577 135 aa11.15□□□□□ -0.62
IRF3-226ENST00000600453 BAP18Q8IXM2 172 aa11.15□□□□□ -0.62
IRF3-226ENST00000600453 OR5C1Q8NGR4 320 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 104.1 ms