RNA–Protein interactions for RNA: ENST00000596436.5

USHBP1-206, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 3

Gene USHBP1, Length 487 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-206ENST00000596436 FAT2Q9NYQ8 4349 aa11.59□□□□□ -0.55
USHBP1-206ENST00000596436 A0A087X0K7 114 aa11.59□□□□□ -0.55
USHBP1-206ENST00000596436 GIG44P09565 113 aaPredicted RBP11.59□□□□□ -0.55
USHBP1-206ENST00000596436 C4BPBP20851 252 aa11.59□□□□□ -0.55
USHBP1-206ENST00000596436 FGL1Q08830 312 aa11.59□□□□□ -0.55
USHBP1-206ENST00000596436 S100A7AQ86SG5 101 aa11.59□□□□□ -0.55
USHBP1-206ENST00000596436 OR1L4Q8NGR5 311 aa11.59□□□□□ -0.55
USHBP1-206ENST00000596436 GATAD1Q8WUU5 269 aa11.59□□□□□ -0.55
USHBP1-206ENST00000596436 C16orf92Q96LL3 132 aa11.59□□□□□ -0.55
USHBP1-206ENST00000596436 AQP10Q96PS8 301 aa11.59□□□□□ -0.55
USHBP1-206ENST00000596436 PFDN5Q99471 154 aa11.59□□□□□ -0.55
USHBP1-206ENST00000596436 CSTL1Q9H114 145 aa11.59□□□□□ -0.55
USHBP1-206ENST00000596436 C11orf68Q9H3H3 251 aaKnown RBP11.59□□□□□ -0.55
USHBP1-206ENST00000596436 RFNGQ9Y644 331 aa11.59□□□□□ -0.55
USHBP1-206ENST00000596436 F6UB75 175 aa11.58□□□□□ -0.56
USHBP1-206ENST00000596436 SNRPCP09234 159 aaKnown RBP11.58□□□□□ -0.56
USHBP1-206ENST00000596436 HLA-DMBP28068 263 aa11.58□□□□□ -0.56
USHBP1-206ENST00000596436 ID1P41134 155 aa11.58□□□□□ -0.56
USHBP1-206ENST00000596436 RNF182Q8N6D2 247 aa11.58□□□□□ -0.56
USHBP1-206ENST00000596436 OR2T35Q8NGX2 323 aa11.58□□□□□ -0.56
USHBP1-206ENST00000596436 DNAH2Q9P225 4427 aa11.58□□□□□ -0.56
USHBP1-206ENST00000596436 DNAH17Q9UFH2 4485 aa11.58□□□□□ -0.56
USHBP1-206ENST00000596436 RNF222A6NCQ9 220 aa11.57□□□□□ -0.56
USHBP1-206ENST00000596436 H3BMM0 161 aa11.57□□□□□ -0.56
USHBP1-206ENST00000596436 CA1P00915 261 aaPredicted RBP11.57□□□□□ -0.56
USHBP1-206ENST00000596436 IGLC2P0DOY2 106 aa11.57□□□□□ -0.56
USHBP1-206ENST00000596436 HLA-DRB4P13762 266 aa11.57□□□□□ -0.56
USHBP1-206ENST00000596436 SAMD13Q5VXD3 122 aa11.57□□□□□ -0.56
USHBP1-206ENST00000596436 SPATA31B1PQ5VZV4 182 aa11.57□□□□□ -0.56
USHBP1-206ENST00000596436 PARD6GQ9BYG4 376 aaPredicted RBP11.57□□□□□ -0.56
USHBP1-206ENST00000596436 SAV1Q9H4B6 383 aaPredicted RBP11.57□□□□□ -0.56
USHBP1-206ENST00000596436 HLA-DRB4X5D2U9 266 aa11.57□□□□□ -0.56
USHBP1-206ENST00000596436 RYR1P21817 5038 aa11.57□□□□□ -0.56
USHBP1-206ENST00000596436 FXYD6-FXYD2A0A087WZ82 144 aa11.56□□□□□ -0.56
USHBP1-206ENST00000596436 H3BQ15 152 aa11.56□□□□□ -0.56
USHBP1-206ENST00000596436 SMLR1H3BR10 107 aa11.56□□□□□ -0.56
USHBP1-206ENST00000596436 H3BTX0 84 aa11.56□□□□□ -0.56
USHBP1-206ENST00000596436 SLC17A3O00476 420 aa11.56□□□□□ -0.56
USHBP1-206ENST00000596436 IFNA5P01569 189 aa11.56□□□□□ -0.56
USHBP1-206ENST00000596436 TCTAP57738 103 aa11.56□□□□□ -0.56
USHBP1-206ENST00000596436 FOXI2Q6ZQN5 318 aa11.56□□□□□ -0.56
USHBP1-206ENST00000596436 BPIFA4PQ86YQ2 179 aa11.56□□□□□ -0.56
USHBP1-206ENST00000596436 ZNF709Q8N972 641 aa11.56□□□□□ -0.56
USHBP1-206ENST00000596436 MFFQ9GZY8 342 aa11.56□□□□□ -0.56
USHBP1-206ENST00000596436 KCNIP2Q9NS61 270 aa11.56□□□□□ -0.56
USHBP1-206ENST00000596436 TNFSF18Q9UNG2 199 aa11.56□□□□□ -0.56
USHBP1-206ENST00000596436 RNF24Q9Y225 148 aa11.56□□□□□ -0.56
USHBP1-206ENST00000596436 A0A0J9YX75 114 aa11.55□□□□□ -0.56
USHBP1-206ENST00000596436 C17orf112F2Z3M2 114 aa11.55□□□□□ -0.56
USHBP1-206ENST00000596436 SPP1P10451 314 aa11.55□□□□□ -0.56
USHBP1-206ENST00000596436 MIR17HGQ75NE6 70 aa11.55□□□□□ -0.56
USHBP1-206ENST00000596436 C11orf45Q8TAV5 145 aa11.55□□□□□ -0.56
USHBP1-206ENST00000596436 SCGB1C1Q8TD33 95 aa11.55□□□□□ -0.56
USHBP1-206ENST00000596436 RARRES2Q99969 163 aa11.55□□□□□ -0.56
USHBP1-206ENST00000596436 PKHD1P08F94 4074 aa11.55□□□□□ -0.56
USHBP1-206ENST00000596436 IGKV3-20P01619 116 aa11.54□□□□□ -0.56
USHBP1-206ENST00000596436 PRB4P10163 310 aaPredicted RBP11.54□□□□□ -0.56
USHBP1-206ENST00000596436 NANOS2P60321 138 aaKnown RBP11.54□□□□□ -0.56
USHBP1-206ENST00000596436 FAM78BQ5VT40 261 aa11.54□□□□□ -0.56
USHBP1-206ENST00000596436 MORN3Q6PF18 240 aaPredicted RBP11.54□□□□□ -0.56
USHBP1-206ENST00000596436 FAM167A-AS1Q96KT0 104 aa11.54□□□□□ -0.56
USHBP1-206ENST00000596436 SLC25A2Q9BXI2 301 aa11.54□□□□□ -0.56
USHBP1-206ENST00000596436 ZNF331Q9NQX6 463 aaPredicted RBP11.54□□□□□ -0.56
USHBP1-206ENST00000596436 RPRMQ9NS64 109 aa11.54□□□□□ -0.56
USHBP1-206ENST00000596436 ZNF586Q9NXT0 402 aa11.54□□□□□ -0.56
USHBP1-206ENST00000596436 PYYP10082 97 aa11.53□□□□□ -0.56
USHBP1-206ENST00000596436 CXCL2P19875 107 aa11.53□□□□□ -0.56
USHBP1-206ENST00000596436 FFAR4Q5NUL3 377 aa11.53□□□□□ -0.56
USHBP1-206ENST00000596436 LCN15Q6UWW0 184 aa11.53□□□□□ -0.56
USHBP1-206ENST00000596436 OR11H2Q8NH07 326 aa11.53□□□□□ -0.56
USHBP1-206ENST00000596436 SAT2Q96F10 170 aaPredicted RBP11.53□□□□□ -0.56
USHBP1-206ENST00000596436 HRH4Q9H3N8 390 aa11.53□□□□□ -0.56
USHBP1-206ENST00000596436 CLEC5AQ9NY25 188 aa11.53□□□□□ -0.56
USHBP1-206ENST00000596436 TMEM14CQ9P0S9 112 aa11.53□□□□□ -0.56
USHBP1-206ENST00000596436 ZNF705DP0CH99 300 aaPredicted RBP11.52□□□□□ -0.57
USHBP1-206ENST00000596436 ZNF705BP0CI00 300 aaPredicted RBP11.52□□□□□ -0.57
USHBP1-206ENST00000596436 PSG3Q16557 428 aa11.52□□□□□ -0.57
USHBP1-206ENST00000596436 EBLN2Q6P2I7 272 aa11.52□□□□□ -0.57
USHBP1-206ENST00000596436 CSNK1G2-AS1Q8NCQ2 148 aa11.52□□□□□ -0.57
USHBP1-206ENST00000596436 ZNF738Q8NE65 137 aa11.52□□□□□ -0.57
USHBP1-206ENST00000596436 LRRC20Q8TCA0 184 aa11.52□□□□□ -0.57
USHBP1-206ENST00000596436 C2CD4CQ8TF44 421 aa11.52□□□□□ -0.57
USHBP1-206ENST00000596436 CLUHP3Q96NS8 147 aa11.52□□□□□ -0.57
USHBP1-206ENST00000596436 FUT9Q9Y231 359 aa11.52□□□□□ -0.57
USHBP1-206ENST00000596436 A8MTW9 85 aa11.51□□□□□ -0.57
USHBP1-206ENST00000596436 EIF3GO75821 320 aaKnown RBP eCLIP11.51□□□□□ -0.57
USHBP1-206ENST00000596436 FXYD7P58549 80 aa11.51□□□□□ -0.57
USHBP1-206ENST00000596436 ZNF266Q14584 549 aa11.51□□□□□ -0.57
USHBP1-206ENST00000596436 HSD17B11Q8NBQ5 300 aa11.51□□□□□ -0.57
USHBP1-206ENST00000596436 INO80EQ8NBZ0 244 aaPredicted RBP11.51□□□□□ -0.57
USHBP1-206ENST00000596436 OR4B1Q8NGF8 309 aa11.51□□□□□ -0.57
USHBP1-206ENST00000596436 SLC50A1Q9BRV3 221 aa11.51□□□□□ -0.57
USHBP1-206ENST00000596436 MRPL32Q9BYC8 188 aaKnown RBP11.51□□□□□ -0.57
USHBP1-206ENST00000596436 SLC35B3Q9H1N7 401 aa11.51□□□□□ -0.57
USHBP1-206ENST00000596436 APLNQ9ULZ1 77 aa11.51□□□□□ -0.57
USHBP1-206ENST00000596436 TIMM9Q9Y5J7 89 aa11.51□□□□□ -0.57
USHBP1-206ENST00000596436 PKD1P98161 4303 aa11.5□□□□□ -0.57
USHBP1-206ENST00000596436 ARPC5O15511 151 aa11.5□□□□□ -0.57
USHBP1-206ENST00000596436 NDUFB4O95168 129 aa11.5□□□□□ -0.57
USHBP1-206ENST00000596436 CNN1P51911 297 aaKnown RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms