RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 MPDU1O75352 247 aa7.95□□□□□ -1.14
SHKBP1-206ENST00000595523 IGLC2P0DOY2 106 aa7.95□□□□□ -1.14
SHKBP1-206ENST00000595523 FXYD7P58549 80 aa7.95□□□□□ -1.14
SHKBP1-206ENST00000595523 B2MP61769 119 aa7.95□□□□□ -1.14
SHKBP1-206ENST00000595523 PMS2P11Q13670 270 aa7.95□□□□□ -1.14
SHKBP1-206ENST00000595523 GCSAMLQ5JQS6 135 aa7.95□□□□□ -1.14
SHKBP1-206ENST00000595523 SPATA31B1PQ5VZV4 182 aa7.95□□□□□ -1.14
SHKBP1-206ENST00000595523 OR11H7Q8NGC8 314 aa7.95□□□□□ -1.14
SHKBP1-206ENST00000595523 OR4B1Q8NGF8 309 aa7.95□□□□□ -1.14
SHKBP1-206ENST00000595523 DNAJC4Q9NNZ3 241 aa7.95□□□□□ -1.14
SHKBP1-206ENST00000595523 MBD2Q9UBB5 411 aa7.95□□□□□ -1.14
SHKBP1-206ENST00000595523 LCE6AA0A183 80 aa7.94□□□□□ -1.14
SHKBP1-206ENST00000595523 H3BQ15 152 aa7.94□□□□□ -1.14
SHKBP1-206ENST00000595523 H3BTX0 84 aa7.94□□□□□ -1.14
SHKBP1-206ENST00000595523 ZNF705DP0CH99 300 aaPredicted RBP7.94□□□□□ -1.14
SHKBP1-206ENST00000595523 ZNF705BP0CI00 300 aaPredicted RBP7.94□□□□□ -1.14
SHKBP1-206ENST00000595523 PRB4P10163 310 aaPredicted RBP7.94□□□□□ -1.14
SHKBP1-206ENST00000595523 NUTF2P61970 127 aaKnown RBP7.94□□□□□ -1.14
SHKBP1-206ENST00000595523 FCN2Q15485 313 aa7.94□□□□□ -1.14
SHKBP1-206ENST00000595523 EBLN2Q6P2I7 272 aa7.94□□□□□ -1.14
SHKBP1-206ENST00000595523 ZNF705AQ6ZN79 300 aaPredicted RBP7.94□□□□□ -1.14
SHKBP1-206ENST00000595523 Q6ZRG5 221 aa7.94□□□□□ -1.14
SHKBP1-206ENST00000595523 S100A7AQ86SG5 101 aa7.94□□□□□ -1.14
SHKBP1-206ENST00000595523 C1QTNF4Q9BXJ3 329 aa7.94□□□□□ -1.14
SHKBP1-206ENST00000595523 WDR61Q9GZS3 305 aaKnown RBP7.94□□□□□ -1.14
SHKBP1-206ENST00000595523 ZNF331Q9NQX6 463 aaPredicted RBP7.94□□□□□ -1.14
SHKBP1-206ENST00000595523 HSPB11Q9Y547 144 aa7.94□□□□□ -1.14
SHKBP1-206ENST00000595523 CXorf65A6NEN9 183 aa7.93□□□□□ -1.14
SHKBP1-206ENST00000595523 ZNF705FA8MVS1 300 aaPredicted RBP7.93□□□□□ -1.14
SHKBP1-206ENST00000595523 PET100P0DJ07 73 aa7.93□□□□□ -1.14
SHKBP1-206ENST00000595523 MIFP14174 115 aa7.93□□□□□ -1.14
SHKBP1-206ENST00000595523 CXCL2P19875 107 aa7.93□□□□□ -1.14
SHKBP1-206ENST00000595523 RPL12P30050 165 aaKnown RBP7.93□□□□□ -1.14
SHKBP1-206ENST00000595523 CNN1P51911 297 aaKnown RBP7.93□□□□□ -1.14
SHKBP1-206ENST00000595523 NANOS2P60321 138 aaKnown RBP7.93□□□□□ -1.14
SHKBP1-206ENST00000595523 PSG9Q00887 426 aa7.93□□□□□ -1.14
SHKBP1-206ENST00000595523 PSG3Q16557 428 aa7.93□□□□□ -1.14
SHKBP1-206ENST00000595523 LCN15Q6UWW0 184 aa7.93□□□□□ -1.14
SHKBP1-206ENST00000595523 BPIFA4PQ86YQ2 179 aa7.93□□□□□ -1.14
SHKBP1-206ENST00000595523 ZNF738Q8NE65 137 aa7.93□□□□□ -1.14
SHKBP1-206ENST00000595523 OR1L4Q8NGR5 311 aa7.93□□□□□ -1.14
SHKBP1-206ENST00000595523 SAT2Q96F10 170 aaPredicted RBP7.93□□□□□ -1.14
SHKBP1-206ENST00000595523 PFDN5Q99471 154 aa7.93□□□□□ -1.14
SHKBP1-206ENST00000595523 ATP5SQ99766 215 aa7.93□□□□□ -1.14
SHKBP1-206ENST00000595523 HRH4Q9H3N8 390 aa7.93□□□□□ -1.14
SHKBP1-206ENST00000595523 RNF24Q9Y225 148 aa7.93□□□□□ -1.14
SHKBP1-206ENST00000595523 C1orf158Q8N1D5 194 aa7.92□□□□□ -1.14
SHKBP1-206ENST00000595523 C11orf45Q8TAV5 145 aa7.92□□□□□ -1.14
SHKBP1-206ENST00000595523 SMIM3Q9BZL3 60 aa7.92□□□□□ -1.14
SHKBP1-206ENST00000595523 MFFQ9GZY8 342 aa7.92□□□□□ -1.14
SHKBP1-206ENST00000595523 MED28Q9H204 178 aa7.92□□□□□ -1.14
SHKBP1-206ENST00000595523 WFDC1Q9HC57 220 aa7.92□□□□□ -1.14
SHKBP1-206ENST00000595523 ZNF586Q9NXT0 402 aa7.92□□□□□ -1.14
SHKBP1-206ENST00000595523 NUPR2A6NF83 97 aa7.91□□□□□ -1.14
SHKBP1-206ENST00000595523 M0R2Z0 102 aa7.91□□□□□ -1.14
SHKBP1-206ENST00000595523 CRXO43186 299 aaPredicted RBP7.91□□□□□ -1.14
SHKBP1-206ENST00000595523 Q5BKY6 102 aa7.91□□□□□ -1.14
SHKBP1-206ENST00000595523 CEMP1Q6PRD7 247 aaPredicted RBP7.91□□□□□ -1.14
SHKBP1-206ENST00000595523 OR8A1Q8NGG7 326 aa7.91□□□□□ -1.14
SHKBP1-206ENST00000595523 RPUSD4Q96CM3 377 aaKnown RBP7.91□□□□□ -1.14
SHKBP1-206ENST00000595523 FAM167A-AS1Q96KT0 104 aa7.91□□□□□ -1.14
SHKBP1-206ENST00000595523 NEU1Q99519 415 aa7.91□□□□□ -1.14
SHKBP1-206ENST00000595523 SLC50A1Q9BRV3 221 aa7.91□□□□□ -1.14
SHKBP1-206ENST00000595523 SLC25A2Q9BXI2 301 aa7.91□□□□□ -1.14
SHKBP1-206ENST00000595523 TMEM14CQ9P0S9 112 aa7.91□□□□□ -1.14
SHKBP1-206ENST00000595523 CELA1Q9UNI1 258 aa7.91□□□□□ -1.14
SHKBP1-206ENST00000595523 RFNGQ9Y644 331 aa7.91□□□□□ -1.14
SHKBP1-206ENST00000595523 KMT2AQ03164 3969 aa7.91□□□□□ -1.14
SHKBP1-206ENST00000595523 VPS13DQ5THJ4 4388 aa7.9□□□□□ -1.14
SHKBP1-206ENST00000595523 PRAC2D3DTV9 90 aa7.9□□□□□ -1.14
SHKBP1-206ENST00000595523 DUSP14O95147 198 aaKnown RBP7.9□□□□□ -1.14
SHKBP1-206ENST00000595523 NDUFB4O95168 129 aa7.9□□□□□ -1.14
SHKBP1-206ENST00000595523 PYYP10082 97 aa7.9□□□□□ -1.14
SHKBP1-206ENST00000595523 HIST1H1AQ02539 215 aaPredicted RBP7.9□□□□□ -1.14
SHKBP1-206ENST00000595523 OXA1LQ15070 435 aa7.9□□□□□ -1.14
SHKBP1-206ENST00000595523 SPINK13Q1W4C9 94 aa7.9□□□□□ -1.14
SHKBP1-206ENST00000595523 RGS21Q2M5E4 152 aa7.9□□□□□ -1.14
SHKBP1-206ENST00000595523 MIR17HGQ75NE6 70 aa7.9□□□□□ -1.14
SHKBP1-206ENST00000595523 LRRC20Q8TCA0 184 aa7.9□□□□□ -1.14
SHKBP1-206ENST00000595523 PHLDA1Q8WV24 401 aaPredicted RBP7.9□□□□□ -1.14
SHKBP1-206ENST00000595523 TRBV19A0A075B6N1 114 aa7.89□□□□□ -1.15
SHKBP1-206ENST00000595523 IGHV3OR16-12A0A075B7B8 117 aa7.89□□□□□ -1.15
SHKBP1-206ENST00000595523 GUK1Q16774 197 aa7.89□□□□□ -1.15
SHKBP1-206ENST00000595523 BAP18Q8IXM2 172 aa7.89□□□□□ -1.15
SHKBP1-206ENST00000595523 IGF2BP2-AS1Q96M15 143 aa7.89□□□□□ -1.15
SHKBP1-206ENST00000595523 PARD6GQ9BYG4 376 aaPredicted RBP7.89□□□□□ -1.15
SHKBP1-206ENST00000595523 KCNIP2Q9NS61 270 aa7.89□□□□□ -1.15
SHKBP1-206ENST00000595523 TRAV12-2A0A075B6T6 113 aa7.88□□□□□ -1.15
SHKBP1-206ENST00000595523 C17orf112F2Z3M2 114 aa7.88□□□□□ -1.15
SHKBP1-206ENST00000595523 BOLA2-SMG1P6H3BVE0 249 aa7.88□□□□□ -1.15
SHKBP1-206ENST00000595523 ZNF253O75346 499 aa7.88□□□□□ -1.15
SHKBP1-206ENST00000595523 GIPP09681 153 aaPredicted RBP7.88□□□□□ -1.15
SHKBP1-206ENST00000595523 ZNF503Q96F45 646 aa7.88□□□□□ -1.15
SHKBP1-206ENST00000595523 SMIM9A6NGZ8 99 aa7.87□□□□□ -1.15
SHKBP1-206ENST00000595523 G3V3Q6 166 aa7.87□□□□□ -1.15
SHKBP1-206ENST00000595523 M0R3E3 92 aa7.87□□□□□ -1.15
SHKBP1-206ENST00000595523 INSP01308 110 aa7.87□□□□□ -1.15
SHKBP1-206ENST00000595523 IFNA5P01569 189 aa7.87□□□□□ -1.15
SHKBP1-206ENST00000595523 AMBPP02760 352 aa7.87□□□□□ -1.15
SHKBP1-206ENST00000595523 PRM2P04554 102 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 134 ms