RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 PLA2G2EQ9NZK7 142 aa16.75■□□□□ 0.27
LSM4-204ENST00000594828 YTHDF2Q9Y5A9 579 aaKnown RBP16.75■□□□□ 0.27
LSM4-204ENST00000594828 MRPS12O15235 138 aaKnown RBP16.74■□□□□ 0.27
LSM4-204ENST00000594828 INSP01308 110 aa16.74■□□□□ 0.27
LSM4-204ENST00000594828 PVALBP20472 110 aaPredicted RBP16.74■□□□□ 0.27
LSM4-204ENST00000594828 RAB31Q13636 194 aa16.74■□□□□ 0.27
LSM4-204ENST00000594828 FAM24AA6NFZ4 105 aa16.73■□□□□ 0.27
LSM4-204ENST00000594828 CRXO43186 299 aaPredicted RBP16.73■□□□□ 0.27
LSM4-204ENST00000594828 COX7A2P2O60397 106 aa16.73■□□□□ 0.27
LSM4-204ENST00000594828 CST7O76096 145 aa16.73■□□□□ 0.27
LSM4-204ENST00000594828 HIST1H1AQ02539 215 aaPredicted RBP16.73■□□□□ 0.27
LSM4-204ENST00000594828 MZT2BQ6NZ67 158 aa16.73■□□□□ 0.27
LSM4-204ENST00000594828 OR8A1Q8NGG7 326 aa16.73■□□□□ 0.27
LSM4-204ENST00000594828 C11orf1Q9H5F2 150 aa16.73■□□□□ 0.27
LSM4-204ENST00000594828 P0DMU3 169 aa16.72■□□□□ 0.27
LSM4-204ENST00000594828 FAM231AP0DMU4 169 aa16.72■□□□□ 0.27
LSM4-204ENST00000594828 FAM231CP0DMU5 169 aa16.72■□□□□ 0.27
LSM4-204ENST00000594828 CAMLGP49069 296 aa16.72■□□□□ 0.27
LSM4-204ENST00000594828 B2MP61769 119 aa16.72■□□□□ 0.27
LSM4-204ENST00000594828 RHOBP62745 196 aa16.72■□□□□ 0.27
LSM4-204ENST00000594828 OXA1LQ15070 435 aa16.72■□□□□ 0.27
LSM4-204ENST00000594828 C10orf113Q5VZT2 155 aa16.72■□□□□ 0.27
LSM4-204ENST00000594828 BPIFA4PQ86YQ2 179 aa16.72■□□□□ 0.27
LSM4-204ENST00000594828 S100ZQ8WXG8 99 aa16.72■□□□□ 0.27
LSM4-204ENST00000594828 TMEM37Q8WXS4 190 aa16.72■□□□□ 0.27
LSM4-204ENST00000594828 PPP1R14DQ9NXH3 145 aa16.72■□□□□ 0.27
LSM4-204ENST00000594828 BOLA2-SMG1P6H3BVE0 249 aa16.71■□□□□ 0.27
LSM4-204ENST00000594828 CXCL2P19875 107 aa16.71■□□□□ 0.27
LSM4-204ENST00000594828 S100A10P60903 97 aa16.71■□□□□ 0.27
LSM4-204ENST00000594828 LCN15Q6UWW0 184 aa16.71■□□□□ 0.27
LSM4-204ENST00000594828 Q6ZRG5 221 aa16.71■□□□□ 0.27
LSM4-204ENST00000594828 NRARPQ7Z6K4 114 aa16.71■□□□□ 0.27
LSM4-204ENST00000594828 BAP18Q8IXM2 172 aa16.71■□□□□ 0.27
LSM4-204ENST00000594828 UQCC1Q9NVA1 299 aa16.71■□□□□ 0.27
LSM4-204ENST00000594828 TRAV12-2A0A075B6T6 113 aa16.7■□□□□ 0.26
LSM4-204ENST00000594828 ZNF705GA8MUZ8 300 aaPredicted RBP16.7■□□□□ 0.26
LSM4-204ENST00000594828 SNRPCP09234 159 aaKnown RBP16.7■□□□□ 0.26
LSM4-204ENST00000594828 POM121L12Q8N7R1 296 aa16.7■□□□□ 0.26
LSM4-204ENST00000594828 RPUSD4Q96CM3 377 aaKnown RBP16.7■□□□□ 0.26
LSM4-204ENST00000594828 FAM210BQ96KR6 192 aa16.7■□□□□ 0.26
LSM4-204ENST00000594828 SLC50A1Q9BRV3 221 aa16.7■□□□□ 0.26
LSM4-204ENST00000594828 DNAJC4Q9NNZ3 241 aa16.7■□□□□ 0.26
LSM4-204ENST00000594828 ZNF331Q9NQX6 463 aaPredicted RBP16.7■□□□□ 0.26
LSM4-204ENST00000594828 FRAS1Q86XX4 4008 aa16.7■□□□□ 0.26
LSM4-204ENST00000594828 PRM2P04554 102 aa16.69■□□□□ 0.26
LSM4-204ENST00000594828 PRB4P10163 310 aaPredicted RBP16.69■□□□□ 0.26
LSM4-204ENST00000594828 HTN3P15516 51 aa16.69■□□□□ 0.26
LSM4-204ENST00000594828 SULT1A1P50225 295 aa16.69■□□□□ 0.26
LSM4-204ENST00000594828 DAD1P61803 113 aa16.69■□□□□ 0.26
LSM4-204ENST00000594828 IL15RAQ13261 267 aa16.69■□□□□ 0.26
LSM4-204ENST00000594828 ASAH1Q13510 395 aa16.69■□□□□ 0.26
LSM4-204ENST00000594828 RAB32Q13637 225 aa16.69■□□□□ 0.26
LSM4-204ENST00000594828 MIC13Q5XKP0 118 aa16.69■□□□□ 0.26
LSM4-204ENST00000594828 LYRM2Q9NU23 88 aaPredicted RBP16.69■□□□□ 0.26
LSM4-204ENST00000594828 WDR83OSQ9Y284 106 aa16.69■□□□□ 0.26
LSM4-204ENST00000594828 S100A11P31949 105 aa16.68■□□□□ 0.26
LSM4-204ENST00000594828 OPCMLQ14982 345 aa16.68■□□□□ 0.26
LSM4-204ENST00000594828 MORN5Q5VZ52 161 aa16.68■□□□□ 0.26
LSM4-204ENST00000594828 DNAH10Q8IVF4 4471 aa16.67■□□□□ 0.26
LSM4-204ENST00000594828 VWC2Q2TAL6 325 aa16.67■□□□□ 0.26
LSM4-204ENST00000594828 STX12Q86Y82 276 aa16.67■□□□□ 0.26
LSM4-204ENST00000594828 TMEM252Q8N6L7 170 aa16.67■□□□□ 0.26
LSM4-204ENST00000594828 LINC01587Q99440 93 aa16.67■□□□□ 0.26
LSM4-204ENST00000594828 DNAH6Q9C0G6 4158 aa16.67■□□□□ 0.26
LSM4-204ENST00000594828 IGSF23A1L1A6 192 aa16.66■□□□□ 0.26
LSM4-204ENST00000594828 H3BTX0 84 aa16.66■□□□□ 0.26
LSM4-204ENST00000594828 TSPOP30536 169 aa16.66■□□□□ 0.26
LSM4-204ENST00000594828 HBG1P69891 147 aa16.66■□□□□ 0.26
LSM4-204ENST00000594828 HBG2P69892 147 aa16.66■□□□□ 0.26
LSM4-204ENST00000594828 OR1L4Q8NGR5 311 aa16.66■□□□□ 0.26
LSM4-204ENST00000594828 UBE2L5PA0A1B0GUS4 154 aa16.65■□□□□ 0.26
LSM4-204ENST00000594828 IGLC2P0DOY2 106 aa16.65■□□□□ 0.26
LSM4-204ENST00000594828 RPL29P47914 159 aaKnown RBP16.65■□□□□ 0.26
LSM4-204ENST00000594828 BAXQ07812 192 aa16.65■□□□□ 0.26
LSM4-204ENST00000594828 TMEM256Q8N2U0 113 aa16.65■□□□□ 0.26
LSM4-204ENST00000594828 ENKURQ8TC29 256 aa16.65■□□□□ 0.26
LSM4-204ENST00000594828 PFDN5Q99471 154 aa16.65■□□□□ 0.26
LSM4-204ENST00000594828 TRAV5A0A0B4J249 113 aa16.64■□□□□ 0.25
LSM4-204ENST00000594828 LYRM9A8MSI8 78 aa16.64■□□□□ 0.25
LSM4-204ENST00000594828 H3BQ15 152 aa16.64■□□□□ 0.25
LSM4-204ENST00000594828 SLC17A3O00476 420 aa16.64■□□□□ 0.25
LSM4-204ENST00000594828 AZU1P20160 251 aa16.64■□□□□ 0.25
LSM4-204ENST00000594828 CDKN1BP46527 198 aa16.64■□□□□ 0.25
LSM4-204ENST00000594828 ATP6V1FQ16864 119 aa16.64■□□□□ 0.25
LSM4-204ENST00000594828 GPN1Q9HCN4 374 aaPredicted RBP16.64■□□□□ 0.25
LSM4-204ENST00000594828 SLC39A9Q9NUM3 307 aa16.64■□□□□ 0.25
LSM4-204ENST00000594828 PXMP4Q9Y6I8 212 aa16.64■□□□□ 0.25
LSM4-204ENST00000594828 OR10J6PQ8NGY7 276 aa16.63■□□□□ 0.25
LSM4-204ENST00000594828 SAT2Q96F10 170 aaPredicted RBP16.63■□□□□ 0.25
LSM4-204ENST00000594828 UPK1BO75841 260 aa16.62■□□□□ 0.25
LSM4-204ENST00000594828 HTN1P15515 57 aa16.62■□□□□ 0.25
LSM4-204ENST00000594828 TAS2R60P59551 318 aa16.62■□□□□ 0.25
LSM4-204ENST00000594828 GUK1Q16774 197 aa16.62■□□□□ 0.25
LSM4-204ENST00000594828 UBE2DNLQ8IWF7 75 aa16.62■□□□□ 0.25
LSM4-204ENST00000594828 CHAC2Q8WUX2 184 aa16.62■□□□□ 0.25
LSM4-204ENST00000594828 PRAC2D3DTV9 90 aa16.61■□□□□ 0.25
LSM4-204ENST00000594828 DEFB130BP0DP73 79 aa16.61■□□□□ 0.25
LSM4-204ENST00000594828 DEFB130AP0DP74 79 aa16.61■□□□□ 0.25
LSM4-204ENST00000594828 FGF7P21781 194 aa16.61■□□□□ 0.25
LSM4-204ENST00000594828 TMEM88Q6PEY1 159 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms