RNA–Protein interactions for RNA: ENST00000592705.5

DNMT1-228, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 5,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-228ENST00000592705 FNDC4Q9H6D8 234 aaPredicted RBP10.31□□□□□ -0.76
DNMT1-228ENST00000592705 GATA4P43694 442 aa10.3□□□□□ -0.76
DNMT1-228ENST00000592705 SLC25A2Q9BXI2 301 aa10.3□□□□□ -0.76
DNMT1-228ENST00000592705 LRRK1Q38SD2 2015 aa10.3□□□□□ -0.76
DNMT1-228ENST00000592705 NPIPB5A8MRT5 1133 aa10.3□□□□□ -0.76
DNMT1-228ENST00000592705 SIGLEC9Q9Y336 463 aa10.3□□□□□ -0.76
DNMT1-228ENST00000592705 D6R8Y8 96 aa10.3□□□□□ -0.76
DNMT1-228ENST00000592705 IGKV1-16P04430 117 aa10.3□□□□□ -0.76
DNMT1-228ENST00000592705 HEATR1Q9H583 2144 aaKnown RBP10.3□□□□□ -0.76
DNMT1-228ENST00000592705 PSG3Q16557 428 aa10.3□□□□□ -0.76
DNMT1-228ENST00000592705 MEIG1Q5JSS6 88 aa10.3□□□□□ -0.76
DNMT1-228ENST00000592705 WDR86Q86TI4 376 aa10.3□□□□□ -0.76
DNMT1-228ENST00000592705 NHP2Q9NX24 153 aaKnown RBP10.3□□□□□ -0.76
DNMT1-228ENST00000592705 IGHV1-69DA0A0B4J2H0 117 aa10.3□□□□□ -0.76
DNMT1-228ENST00000592705 BUB1B-PAK6H3BSN5 160 aa10.3□□□□□ -0.76
DNMT1-228ENST00000592705 IGHV1-69P01742 117 aa10.3□□□□□ -0.76
DNMT1-228ENST00000592705 LYZL1Q6UWQ5 148 aa10.3□□□□□ -0.76
DNMT1-228ENST00000592705 C20orf144Q9BQM9 153 aa10.3□□□□□ -0.76
DNMT1-228ENST00000592705 CHD8Q9HCK8 2581 aa10.29□□□□□ -0.76
DNMT1-228ENST00000592705 IGKV2-40A0A087WW87 121 aaPredicted RBP10.29□□□□□ -0.76
DNMT1-228ENST00000592705 SYS1-DBNDD2H3BUS1 97 aa10.29□□□□□ -0.76
DNMT1-228ENST00000592705 IGKV2D-40P01614 121 aaPredicted RBP10.29□□□□□ -0.76
DNMT1-228ENST00000592705 TDGF1P3P51864 188 aa10.29□□□□□ -0.76
DNMT1-228ENST00000592705 LCN12Q6JVE5 192 aa10.29□□□□□ -0.76
DNMT1-228ENST00000592705 ZGRF1Q86YA3 2104 aa10.29□□□□□ -0.76
DNMT1-228ENST00000592705 POLR3KQ9Y2Y1 108 aaPredicted RBP10.29□□□□□ -0.76
DNMT1-228ENST00000592705 Q8NFD4 153 aa10.29□□□□□ -0.76
DNMT1-228ENST00000592705 TMEM101Q96IK0 257 aa10.29□□□□□ -0.76
DNMT1-228ENST00000592705 OVOL1O14753 267 aa10.29□□□□□ -0.76
DNMT1-228ENST00000592705 MLANAQ16655 118 aa10.29□□□□□ -0.76
DNMT1-228ENST00000592705 SRSF8Q9BRL6 282 aaKnown RBP10.29□□□□□ -0.76
DNMT1-228ENST00000592705 VCX2Q9H322 139 aa10.29□□□□□ -0.76
DNMT1-228ENST00000592705 ZNF407Q9C0G0 2248 aa10.29□□□□□ -0.76
DNMT1-228ENST00000592705 WT1P19544 449 aaPredicted RBP10.29□□□□□ -0.76
DNMT1-228ENST00000592705 PPIFP30405 207 aaKnown RBP10.29□□□□□ -0.76
DNMT1-228ENST00000592705 TTC32Q5I0X7 151 aa10.29□□□□□ -0.76
DNMT1-228ENST00000592705 ZNF503-AS2A6NEH8 195 aa10.28□□□□□ -0.76
DNMT1-228ENST00000592705 EVI2AP22794 236 aa10.28□□□□□ -0.76
DNMT1-228ENST00000592705 UBE2E1P51965 193 aa10.28□□□□□ -0.76
DNMT1-228ENST00000592705 HAPLN4Q86UW8 402 aa10.28□□□□□ -0.76
DNMT1-228ENST00000592705 USMG5Q96IX5 58 aa10.28□□□□□ -0.76
DNMT1-228ENST00000592705 NUP210Q8TEM1 1887 aaPredicted RBP10.28□□□□□ -0.76
DNMT1-228ENST00000592705 TRGV4A0A0C4DH28 118 aa10.28□□□□□ -0.76
DNMT1-228ENST00000592705 OR2K2Q8NGT1 345 aa10.28□□□□□ -0.76
DNMT1-228ENST00000592705 CYSLTR1Q9Y271 337 aa10.28□□□□□ -0.76
DNMT1-228ENST00000592705 LINC01549A6NIU2 74 aa10.28□□□□□ -0.76
DNMT1-228ENST00000592705 YPEL3P61236 119 aaPredicted RBP10.28□□□□□ -0.76
DNMT1-228ENST00000592705 IL17RELQ6ZVW7 336 aa10.28□□□□□ -0.76
DNMT1-228ENST00000592705 Q86TA4 180 aa10.28□□□□□ -0.76
DNMT1-228ENST00000592705 CHTOPQ9Y3Y2 248 aaKnown RBP10.28□□□□□ -0.76
DNMT1-228ENST00000592705 A0A1B0GV72 72 aa10.28□□□□□ -0.76
DNMT1-228ENST00000592705 PSCAO43653 123 aa10.28□□□□□ -0.76
DNMT1-228ENST00000592705 APOMO95445 188 aa10.28□□□□□ -0.76
DNMT1-228ENST00000592705 LYPD6Q86Y78 171 aa10.28□□□□□ -0.76
DNMT1-228ENST00000592705 PRORYQ9H606 182 aa10.28□□□□□ -0.76
DNMT1-228ENST00000592705 LAGE3Q14657 143 aa10.27□□□□□ -0.76
DNMT1-228ENST00000592705 SIGLEC15Q6ZMC9 328 aa10.27□□□□□ -0.76
DNMT1-228ENST00000592705 ZNF492Q9P255 531 aa10.27□□□□□ -0.76
DNMT1-228ENST00000592705 FAM215AQ9Y5M1 114 aa10.27□□□□□ -0.76
DNMT1-228ENST00000592705 SH2D1AO60880 128 aa10.27□□□□□ -0.77
DNMT1-228ENST00000592705 C5orf64Q2M2E5 130 aa10.27□□□□□ -0.77
DNMT1-228ENST00000592705 RNF138Q8WVD3 245 aa10.27□□□□□ -0.77
DNMT1-228ENST00000592705 MRPS16Q9Y3D3 137 aaKnown RBP10.27□□□□□ -0.77
DNMT1-228ENST00000592705 EREGO14944 169 aa10.27□□□□□ -0.77
DNMT1-228ENST00000592705 CRPP02741 224 aa10.27□□□□□ -0.77
DNMT1-228ENST00000592705 Q6ZR03 302 aa10.27□□□□□ -0.77
DNMT1-228ENST00000592705 hDV102S1A0JD36 115 aa10.27□□□□□ -0.77
DNMT1-228ENST00000592705 H3BRM9 83 aa10.27□□□□□ -0.77
DNMT1-228ENST00000592705 CD7P09564 240 aa10.27□□□□□ -0.77
DNMT1-228ENST00000592705 SUMO2P61956 95 aaKnown RBP10.27□□□□□ -0.77
DNMT1-228ENST00000592705 Q8TCH9 128 aa10.27□□□□□ -0.77
DNMT1-228ENST00000592705 NDUFA4L2Q9NRX3 87 aa10.27□□□□□ -0.77
DNMT1-228ENST00000592705 CSPG4Q6UVK1 2322 aa10.27□□□□□ -0.77
DNMT1-228ENST00000592705 NOTCH4Q99466 2003 aa10.26□□□□□ -0.77
DNMT1-228ENST00000592705 C15orf32Q32M92 178 aa10.26□□□□□ -0.77
DNMT1-228ENST00000592705 DENND4CQ5VZ89 1909 aa10.26□□□□□ -0.77
DNMT1-228ENST00000592705 RPL15P61313 204 aaKnown RBP10.26□□□□□ -0.77
DNMT1-228ENST00000592705 Q6ZSR3 168 aa10.26□□□□□ -0.77
DNMT1-228ENST00000592705 LINC00479Q96M42 142 aa10.26□□□□□ -0.77
DNMT1-228ENST00000592705 FAM231BA6NCW3 169 aa10.26□□□□□ -0.77
DNMT1-228ENST00000592705 CT83Q5H943 113 aa10.26□□□□□ -0.77
DNMT1-228ENST00000592705 MRAP2Q96G30 205 aa10.26□□□□□ -0.77
DNMT1-228ENST00000592705 A0A1W2PPI3 338 aa10.26□□□□□ -0.77
DNMT1-228ENST00000592705 RPL35AP18077 110 aaKnown RBP10.26□□□□□ -0.77
DNMT1-228ENST00000592705 CYYR1Q96J86 154 aa10.26□□□□□ -0.77
DNMT1-228ENST00000592705 IGHV2-70DA0A0C4DH43 119 aa10.25□□□□□ -0.77
DNMT1-228ENST00000592705 C15orf65H3BRN8 121 aa10.25□□□□□ -0.77
DNMT1-228ENST00000592705 K7EM74 188 aa10.25□□□□□ -0.77
DNMT1-228ENST00000592705 GUSBP1Q15486 140 aa10.25□□□□□ -0.77
DNMT1-228ENST00000592705 RUSC1-AS1Q66K80 236 aa10.25□□□□□ -0.77
DNMT1-228ENST00000592705 LYPD2Q6UXB3 125 aa10.25□□□□□ -0.77
DNMT1-228ENST00000592705 SHANK2-AS3Q9BTD1 123 aa10.25□□□□□ -0.77
DNMT1-228ENST00000592705 TRAV8-1A0A0A6YYK1 113 aa10.25□□□□□ -0.77
DNMT1-228ENST00000592705 HOXA3O43365 443 aaPredicted RBP10.25□□□□□ -0.77
DNMT1-228ENST00000592705 NCR2O95944 276 aa10.25□□□□□ -0.77
DNMT1-228ENST00000592705 ZNF833PQ6ZTB9 187 aa10.25□□□□□ -0.77
DNMT1-228ENST00000592705 TMEM249Q2WGJ8 235 aa10.25□□□□□ -0.77
DNMT1-228ENST00000592705 PRR31Q5SQ13 230 aa10.25□□□□□ -0.77
DNMT1-228ENST00000592705 SAMD5Q5TGI4 173 aa10.25□□□□□ -0.77
DNMT1-228ENST00000592705 C18orf32Q8TCD1 76 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms