RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 IGSF23A1L1A6 192 aa9.94□□□□□ -0.82
APOC1-208ENST00000592535 COX7A2P2O60397 106 aa9.94□□□□□ -0.82
APOC1-208ENST00000592535 DUSP14O95147 198 aaKnown RBP9.94□□□□□ -0.82
APOC1-208ENST00000592535 PRB4P10163 310 aaPredicted RBP9.94□□□□□ -0.82
APOC1-208ENST00000592535 CXCL3P19876 107 aa9.94□□□□□ -0.82
APOC1-208ENST00000592535 CAMLGP49069 296 aa9.94□□□□□ -0.82
APOC1-208ENST00000592535 MORN5Q5VZ52 161 aa9.94□□□□□ -0.82
APOC1-208ENST00000592535 TMEM252Q8N6L7 170 aa9.94□□□□□ -0.82
APOC1-208ENST00000592535 TMEM37Q8WXS4 190 aa9.94□□□□□ -0.82
APOC1-208ENST00000592535 LYRM2Q9NU23 88 aaPredicted RBP9.94□□□□□ -0.82
APOC1-208ENST00000592535 UQCC1Q9NVA1 299 aa9.94□□□□□ -0.82
APOC1-208ENST00000592535 WDR83OSQ9Y284 106 aa9.94□□□□□ -0.82
APOC1-208ENST00000592535 IGHV4-4A0A075B6R2 117 aa9.93□□□□□ -0.82
APOC1-208ENST00000592535 DEFB131BA0A096LNP1 70 aa9.93□□□□□ -0.82
APOC1-208ENST00000592535 TMEM189A5PLL7 270 aa9.93□□□□□ -0.82
APOC1-208ENST00000592535 M0R2Z0 102 aa9.93□□□□□ -0.82
APOC1-208ENST00000592535 HBE1P02100 147 aa9.93□□□□□ -0.82
APOC1-208ENST00000592535 SNRPCP09234 159 aaKnown RBP9.93□□□□□ -0.82
APOC1-208ENST00000592535 SPART-AS1P0CW21 52 aa9.93□□□□□ -0.82
APOC1-208ENST00000592535 SULT1A1P50225 295 aa9.93□□□□□ -0.82
APOC1-208ENST00000592535 PRR20EP86478 221 aa9.93□□□□□ -0.82
APOC1-208ENST00000592535 PRR20CP86479 221 aa9.93□□□□□ -0.82
APOC1-208ENST00000592535 PRR20DP86480 221 aa9.93□□□□□ -0.82
APOC1-208ENST00000592535 PRR20BP86481 221 aa9.93□□□□□ -0.82
APOC1-208ENST00000592535 PRR20AP86496 221 aa9.93□□□□□ -0.82
APOC1-208ENST00000592535 PSG3Q16557 428 aa9.93□□□□□ -0.82
APOC1-208ENST00000592535 SPINK13Q1W4C9 94 aa9.93□□□□□ -0.82
APOC1-208ENST00000592535 VWC2Q2TAL6 325 aa9.93□□□□□ -0.82
APOC1-208ENST00000592535 MIC13Q5XKP0 118 aa9.93□□□□□ -0.82
APOC1-208ENST00000592535 LRRC20Q8TCA0 184 aa9.93□□□□□ -0.82
APOC1-208ENST00000592535 IGF2BP2-AS1Q96M15 143 aa9.93□□□□□ -0.82
APOC1-208ENST00000592535 RNF24Q9Y225 148 aa9.93□□□□□ -0.82
APOC1-208ENST00000592535 UBE2L5PA0A1B0GUS4 154 aa9.92□□□□□ -0.82
APOC1-208ENST00000592535 LOC102723971A0A1B0GUV8 181 aa9.92□□□□□ -0.82
APOC1-208ENST00000592535 CRXO43186 299 aaPredicted RBP9.92□□□□□ -0.82
APOC1-208ENST00000592535 SIX6O95475 246 aa9.92□□□□□ -0.82
APOC1-208ENST00000592535 AMBPP02760 352 aa9.92□□□□□ -0.82
APOC1-208ENST00000592535 HIST1H1AQ02539 215 aaPredicted RBP9.92□□□□□ -0.82
APOC1-208ENST00000592535 RAB31Q13636 194 aa9.92□□□□□ -0.82
APOC1-208ENST00000592535 OPCMLQ14982 345 aa9.92□□□□□ -0.82
APOC1-208ENST00000592535 C10orf113Q5VZT2 155 aa9.92□□□□□ -0.82
APOC1-208ENST00000592535 OR8A1Q8NGG7 326 aa9.92□□□□□ -0.82
APOC1-208ENST00000592535 RNF126Q9BV68 326 aa9.92□□□□□ -0.82
APOC1-208ENST00000592535 DKK2Q9UBU2 259 aa9.92□□□□□ -0.82
APOC1-208ENST00000592535 BIRC6Q9NR09 4857 aa9.91□□□□□ -0.82
APOC1-208ENST00000592535 H3BTX0 84 aa9.91□□□□□ -0.82
APOC1-208ENST00000592535 BOLA2-SMG1P6H3BVE0 249 aa9.91□□□□□ -0.82
APOC1-208ENST00000592535 INSP01308 110 aa9.91□□□□□ -0.82
APOC1-208ENST00000592535 CXCL2P19875 107 aa9.91□□□□□ -0.82
APOC1-208ENST00000592535 S100A11P31949 105 aa9.91□□□□□ -0.82
APOC1-208ENST00000592535 BAXQ07812 192 aa9.91□□□□□ -0.82
APOC1-208ENST00000592535 FCN2Q15485 313 aa9.91□□□□□ -0.82
APOC1-208ENST00000592535 RRN3P1Q2M238 152 aa9.91□□□□□ -0.82
APOC1-208ENST00000592535 FAM222AQ5U5X8 452 aa9.91□□□□□ -0.82
APOC1-208ENST00000592535 LCN15Q6UWW0 184 aa9.91□□□□□ -0.82
APOC1-208ENST00000592535 Q6ZRG5 221 aa9.91□□□□□ -0.82
APOC1-208ENST00000592535 STX12Q86Y82 276 aa9.91□□□□□ -0.82
APOC1-208ENST00000592535 BPIFA4PQ86YQ2 179 aa9.91□□□□□ -0.82
APOC1-208ENST00000592535 BAP18Q8IXM2 172 aa9.91□□□□□ -0.82
APOC1-208ENST00000592535 TMEM208Q9BTX3 173 aa9.91□□□□□ -0.82
APOC1-208ENST00000592535 DNAJC4Q9NNZ3 241 aa9.91□□□□□ -0.82
APOC1-208ENST00000592535 ZNF331Q9NQX6 463 aaPredicted RBP9.91□□□□□ -0.82
APOC1-208ENST00000592535 YTHDF2Q9Y5A9 579 aaKnown RBP9.91□□□□□ -0.82
APOC1-208ENST00000592535 VPS13DQ5THJ4 4388 aa9.91□□□□□ -0.82
APOC1-208ENST00000592535 hCG_2014768A0A024R1R8 64 aa9.9□□□□□ -0.82
APOC1-208ENST00000592535 TRAV12-2A0A075B6T6 113 aa9.9□□□□□ -0.82
APOC1-208ENST00000592535 TRAV5A0A0B4J249 113 aa9.9□□□□□ -0.82
APOC1-208ENST00000592535 SLC17A3O00476 420 aa9.9□□□□□ -0.82
APOC1-208ENST00000592535 PRM2P04554 102 aa9.9□□□□□ -0.82
APOC1-208ENST00000592535 IGLC2P0DOY2 106 aa9.9□□□□□ -0.82
APOC1-208ENST00000592535 RHOBP62745 196 aa9.9□□□□□ -0.82
APOC1-208ENST00000592535 HBG1P69891 147 aa9.9□□□□□ -0.82
APOC1-208ENST00000592535 HBG2P69892 147 aa9.9□□□□□ -0.82
APOC1-208ENST00000592535 RPUSD4Q96CM3 377 aaKnown RBP9.9□□□□□ -0.82
APOC1-208ENST00000592535 SLC50A1Q9BRV3 221 aa9.9□□□□□ -0.82
APOC1-208ENST00000592535 MED28Q9H204 178 aa9.9□□□□□ -0.82
APOC1-208ENST00000592535 PLA2G2EQ9NZK7 142 aa9.9□□□□□ -0.82
APOC1-208ENST00000592535 TEX48A0A1B0GUV7 120 aa9.89□□□□□ -0.83
APOC1-208ENST00000592535 ZNF705GA8MUZ8 300 aaPredicted RBP9.89□□□□□ -0.83
APOC1-208ENST00000592535 H3BQ15 152 aa9.89□□□□□ -0.83
APOC1-208ENST00000592535 FGF7P21781 194 aa9.89□□□□□ -0.83
APOC1-208ENST00000592535 RPL29P47914 159 aaKnown RBP9.89□□□□□ -0.83
APOC1-208ENST00000592535 B2MP61769 119 aa9.89□□□□□ -0.83
APOC1-208ENST00000592535 ATP6V1FQ16864 119 aa9.89□□□□□ -0.83
APOC1-208ENST00000592535 OR1L4Q8NGR5 311 aa9.89□□□□□ -0.83
APOC1-208ENST00000592535 NIPSNAP3BQ9BS92 247 aa9.89□□□□□ -0.83
APOC1-208ENST00000592535 SLC39A9Q9NUM3 307 aa9.89□□□□□ -0.83
APOC1-208ENST00000592535 KMT2AQ03164 3969 aa9.89□□□□□ -0.83
APOC1-208ENST00000592535 SSNA1O43805 119 aa9.88□□□□□ -0.83
APOC1-208ENST00000592535 NHLH2Q02577 135 aa9.88□□□□□ -0.83
APOC1-208ENST00000592535 LRRC37A5PQ49AS3 106 aa9.88□□□□□ -0.83
APOC1-208ENST00000592535 SAT2Q96F10 170 aaPredicted RBP9.88□□□□□ -0.83
APOC1-208ENST00000592535 PFDN5Q99471 154 aa9.88□□□□□ -0.83
APOC1-208ENST00000592535 NMES1Q9C002 83 aa9.88□□□□□ -0.83
APOC1-208ENST00000592535 PPP1R14DQ9NXH3 145 aa9.88□□□□□ -0.83
APOC1-208ENST00000592535 OR5AC2Q9NZP5 309 aa9.88□□□□□ -0.83
APOC1-208ENST00000592535 PXMP4Q9Y6I8 212 aa9.88□□□□□ -0.83
APOC1-208ENST00000592535 PRAC2D3DTV9 90 aa9.87□□□□□ -0.83
APOC1-208ENST00000592535 E5RGE8 158 aa9.87□□□□□ -0.83
APOC1-208ENST00000592535 H0YIZ8 118 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms