RNA–Protein interactions for RNA: ENST00000590830.5

MBD3-208, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best)

Gene MBD3, Length 1,035 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-208ENST00000590830 SLC39A9Q9NUM3 307 aa16.16■□□□□ 0.18
MBD3-208ENST00000590830 HYDINQ4G0P3 5121 aa16.15■□□□□ 0.18
MBD3-208ENST00000590830 MPC2O95563 127 aa16.15■□□□□ 0.18
MBD3-208ENST00000590830 ZNF705DP0CH99 300 aaPredicted RBP16.15■□□□□ 0.18
MBD3-208ENST00000590830 ZNF705BP0CI00 300 aaPredicted RBP16.15■□□□□ 0.18
MBD3-208ENST00000590830 MIFP14174 115 aa16.15■□□□□ 0.18
MBD3-208ENST00000590830 PSG9Q00887 426 aa16.15■□□□□ 0.18
MBD3-208ENST00000590830 CEMP1Q6PRD7 247 aaPredicted RBP16.15■□□□□ 0.18
MBD3-208ENST00000590830 AMTNQ6UX39 209 aa16.15■□□□□ 0.18
MBD3-208ENST00000590830 Q6ZRG5 221 aa16.15■□□□□ 0.18
MBD3-208ENST00000590830 PTTG1O95997 202 aa16.14■□□□□ 0.17
MBD3-208ENST00000590830 PRB4P10163 310 aaPredicted RBP16.14■□□□□ 0.17
MBD3-208ENST00000590830 CXCL3P19876 107 aa16.14■□□□□ 0.17
MBD3-208ENST00000590830 B2MP61769 119 aa16.14■□□□□ 0.17
MBD3-208ENST00000590830 C11orf45Q8TAV5 145 aa16.14■□□□□ 0.17
MBD3-208ENST00000590830 THAP6Q8TBB0 222 aa16.14■□□□□ 0.17
MBD3-208ENST00000590830 PXMP4Q9Y6I8 212 aa16.14■□□□□ 0.17
MBD3-208ENST00000590830 ALMS1Q8TCU4 4167 aa16.13■□□□□ 0.17
MBD3-208ENST00000590830 CLINT1Q14677 625 aa16.13■□□□□ 0.17
MBD3-208ENST00000590830 ZNF705AQ6ZN79 300 aaPredicted RBP16.13■□□□□ 0.17
MBD3-208ENST00000590830 OR1L4Q8NGR5 311 aa16.13■□□□□ 0.17
MBD3-208ENST00000590830 NPCDR1Q9BY65 106 aa16.13■□□□□ 0.17
MBD3-208ENST00000590830 RNF24Q9Y225 148 aa16.13■□□□□ 0.17
MBD3-208ENST00000590830 H3BQ15 152 aa16.12■□□□□ 0.17
MBD3-208ENST00000590830 H3BTX0 84 aa16.12■□□□□ 0.17
MBD3-208ENST00000590830 IGLC2P0DOY2 106 aa16.12■□□□□ 0.17
MBD3-208ENST00000590830 CNN1P51911 297 aaKnown RBP16.12■□□□□ 0.17
MBD3-208ENST00000590830 PSG3Q16557 428 aa16.12■□□□□ 0.17
MBD3-208ENST00000590830 GCSAMLQ5JQS6 135 aa16.12■□□□□ 0.17
MBD3-208ENST00000590830 BPIFA4PQ86YQ2 179 aa16.12■□□□□ 0.17
MBD3-208ENST00000590830 ZNF738Q8NE65 137 aa16.12■□□□□ 0.17
MBD3-208ENST00000590830 PHLDA1Q8WV24 401 aaPredicted RBP16.12■□□□□ 0.17
MBD3-208ENST00000590830 ZNF705FA8MVS1 300 aaPredicted RBP16.11■□□□□ 0.17
MBD3-208ENST00000590830 MPDU1O75352 247 aa16.11■□□□□ 0.17
MBD3-208ENST00000590830 C1orf158Q8N1D5 194 aa16.11■□□□□ 0.17
MBD3-208ENST00000590830 LRRC20Q8TCA0 184 aa16.11■□□□□ 0.17
MBD3-208ENST00000590830 SAT2Q96F10 170 aaPredicted RBP16.11■□□□□ 0.17
MBD3-208ENST00000590830 ZNF331Q9NQX6 463 aaPredicted RBP16.11■□□□□ 0.17
MBD3-208ENST00000590830 NUPR2A6NF83 97 aa16.1■□□□□ 0.17
MBD3-208ENST00000590830 SLC17A3O00476 420 aa16.1■□□□□ 0.17
MBD3-208ENST00000590830 OR11H7Q8NGC8 314 aa16.1■□□□□ 0.17
MBD3-208ENST00000590830 PFDN5Q99471 154 aa16.1■□□□□ 0.17
MBD3-208ENST00000590830 WDR61Q9GZS3 305 aaKnown RBP16.1■□□□□ 0.17
MBD3-208ENST00000590830 MFFQ9GZY8 342 aa16.1■□□□□ 0.17
MBD3-208ENST00000590830 DUSP14O95147 198 aaKnown RBP16.09■□□□□ 0.17
MBD3-208ENST00000590830 CXCL2P19875 107 aa16.09■□□□□ 0.17
MBD3-208ENST00000590830 LCN15Q6UWW0 184 aa16.09■□□□□ 0.17
MBD3-208ENST00000590830 HRH4Q9H3N8 390 aa16.09■□□□□ 0.17
MBD3-208ENST00000590830 MBD2Q9UBB5 411 aa16.09■□□□□ 0.17
MBD3-208ENST00000590830 HSPB11Q9Y547 144 aa16.09■□□□□ 0.17
MBD3-208ENST00000590830 FCN2Q15485 313 aa16.08■□□□□ 0.16
MBD3-208ENST00000590830 OR8A1Q8NGG7 326 aa16.08■□□□□ 0.16
MBD3-208ENST00000590830 NEU1Q99519 415 aa16.08■□□□□ 0.16
MBD3-208ENST00000590830 ZNF586Q9NXT0 402 aa16.08■□□□□ 0.16
MBD3-208ENST00000590830 IGHV3OR16-12A0A075B7B8 117 aa16.07■□□□□ 0.16
MBD3-208ENST00000590830 PRAC2D3DTV9 90 aa16.07■□□□□ 0.16
MBD3-208ENST00000590830 CRXO43186 299 aaPredicted RBP16.07■□□□□ 0.16
MBD3-208ENST00000590830 RPL12P30050 165 aaKnown RBP16.07■□□□□ 0.16
MBD3-208ENST00000590830 RPUSD4Q96CM3 377 aaKnown RBP16.07■□□□□ 0.16
MBD3-208ENST00000590830 CELA1Q9UNI1 258 aa16.07■□□□□ 0.16
MBD3-208ENST00000590830 M0R2Z0 102 aa16.06■□□□□ 0.16
MBD3-208ENST00000590830 PET100P0DJ07 73 aa16.06■□□□□ 0.16
MBD3-208ENST00000590830 SPINK13Q1W4C9 94 aa16.06■□□□□ 0.16
MBD3-208ENST00000590830 ATP5SQ99766 215 aa16.06■□□□□ 0.16
MBD3-208ENST00000590830 SLC50A1Q9BRV3 221 aa16.06■□□□□ 0.16
MBD3-208ENST00000590830 WFDC1Q9HC57 220 aa16.06■□□□□ 0.16
MBD3-208ENST00000590830 JTBO76095 146 aa16.05■□□□□ 0.16
MBD3-208ENST00000590830 HIST1H1AQ02539 215 aaPredicted RBP16.05■□□□□ 0.16
MBD3-208ENST00000590830 IGF2BP2-AS1Q96M15 143 aa16.05■□□□□ 0.16
MBD3-208ENST00000590830 SMIM3Q9BZL3 60 aa16.05■□□□□ 0.16
MBD3-208ENST00000590830 KLK5Q9Y337 293 aaPredicted RBP16.05■□□□□ 0.16
MBD3-208ENST00000590830 FAM167A-AS1Q96KT0 104 aa16.04■□□□□ 0.16
MBD3-208ENST00000590830 MED28Q9H204 178 aa16.04■□□□□ 0.16
MBD3-208ENST00000590830 TMEM14CQ9P0S9 112 aa16.04■□□□□ 0.16
MBD3-208ENST00000590830 GOLT1BQ9Y3E0 138 aa16.04■□□□□ 0.16
MBD3-208ENST00000590830 SMIM9A6NGZ8 99 aa16.03■□□□□ 0.16
MBD3-208ENST00000590830 PYYP10082 97 aa16.03■□□□□ 0.16
MBD3-208ENST00000590830 GUK1Q16774 197 aa16.03■□□□□ 0.16
MBD3-208ENST00000590830 C12orf74Q32Q52 190 aa16.03■□□□□ 0.16
MBD3-208ENST00000590830 MIR17HGQ75NE6 70 aa16.03■□□□□ 0.16
MBD3-208ENST00000590830 SLC25A2Q9BXI2 301 aa16.03■□□□□ 0.16
MBD3-208ENST00000590830 RFNGQ9Y644 331 aa16.03■□□□□ 0.16
MBD3-208ENST00000590830 TRBV19A0A075B6N1 114 aa16.02■□□□□ 0.16
MBD3-208ENST00000590830 NDUFB4O95168 129 aa16.02■□□□□ 0.16
MBD3-208ENST00000590830 PRM2P04554 102 aa16.02■□□□□ 0.16
MBD3-208ENST00000590830 RHOBP62745 196 aa16.02■□□□□ 0.16
MBD3-208ENST00000590830 Q5BKY6 102 aa16.02■□□□□ 0.16
MBD3-208ENST00000590830 Q6ZTC4 211 aa16.02■□□□□ 0.16
MBD3-208ENST00000590830 ZNF767PQ75MW2 155 aa16.02■□□□□ 0.16
MBD3-208ENST00000590830 TRAV12-2A0A075B6T6 113 aa16.01■□□□□ 0.15
MBD3-208ENST00000590830 BOLA2-SMG1P6H3BVE0 249 aa16.01■□□□□ 0.15
MBD3-208ENST00000590830 AMBPP02760 352 aa16.01■□□□□ 0.15
MBD3-208ENST00000590830 HIST1H1EP10412 219 aaKnown RBP16.01■□□□□ 0.15
MBD3-208ENST00000590830 EMP1P54849 157 aa16.01■□□□□ 0.15
MBD3-208ENST00000590830 BAP18Q8IXM2 172 aa16.01■□□□□ 0.15
MBD3-208ENST00000590830 LINC00476Q8WZB0 136 aa16.01■□□□□ 0.15
MBD3-208ENST00000590830 ZNF253O75346 499 aa16■□□□□ 0.15
MBD3-208ENST00000590830 C17orf112F2Z3M2 114 aa15.98■□□□□ 0.15
MBD3-208ENST00000590830 M0R3E3 92 aa15.98■□□□□ 0.15
MBD3-208ENST00000590830 INSP01308 110 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms