RNA–Protein interactions for RNA: ENST00000590260.5

DDX39A-212, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 988 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-212ENST00000590260 C10orf113Q5VZT2 155 aa13.16□□□□□ -0.3
DDX39A-212ENST00000590260 ZNF705AQ6ZN79 300 aaPredicted RBP13.16□□□□□ -0.3
DDX39A-212ENST00000590260 OR4B1Q8NGF8 309 aa13.16□□□□□ -0.3
DDX39A-212ENST00000590260 NPCDR1Q9BY65 106 aa13.16□□□□□ -0.3
DDX39A-212ENST00000590260 DNAJC4Q9NNZ3 241 aa13.16□□□□□ -0.3
DDX39A-212ENST00000590260 PXMP4Q9Y6I8 212 aa13.16□□□□□ -0.3
DDX39A-212ENST00000590260 H3BQ15 152 aa13.15□□□□□ -0.3
DDX39A-212ENST00000590260 RLN2P04090 185 aa13.15□□□□□ -0.3
DDX39A-212ENST00000590260 IGLC2P0DOY2 106 aa13.15□□□□□ -0.3
DDX39A-212ENST00000590260 B2MP61769 119 aa13.15□□□□□ -0.3
DDX39A-212ENST00000590260 OR11H7Q8NGC8 314 aa13.15□□□□□ -0.3
DDX39A-212ENST00000590260 THAP6Q8TBB0 222 aa13.15□□□□□ -0.3
DDX39A-212ENST00000590260 ZNF705FA8MVS1 300 aaPredicted RBP13.14□□□□□ -0.31
DDX39A-212ENST00000590260 S100A7P31151 101 aa13.14□□□□□ -0.31
DDX39A-212ENST00000590260 RAB31Q13636 194 aa13.14□□□□□ -0.31
DDX39A-212ENST00000590260 CLINT1Q14677 625 aa13.14□□□□□ -0.31
DDX39A-212ENST00000590260 SPATA31B1PQ5VZV4 182 aa13.14□□□□□ -0.31
DDX39A-212ENST00000590260 C1orf158Q8N1D5 194 aa13.14□□□□□ -0.31
DDX39A-212ENST00000590260 SAT2Q96F10 170 aaPredicted RBP13.14□□□□□ -0.31
DDX39A-212ENST00000590260 SLC25A31Q9H0C2 315 aa13.14□□□□□ -0.31
DDX39A-212ENST00000590260 ZNF331Q9NQX6 463 aaPredicted RBP13.14□□□□□ -0.31
DDX39A-212ENST00000590260 MBD2Q9UBB5 411 aa13.14□□□□□ -0.31
DDX39A-212ENST00000590260 CXorf65A6NEN9 183 aa13.13□□□□□ -0.31
DDX39A-212ENST00000590260 MIFP14174 115 aa13.13□□□□□ -0.31
DDX39A-212ENST00000590260 CNN1P51911 297 aaKnown RBP13.13□□□□□ -0.31
DDX39A-212ENST00000590260 NUTF2P61970 127 aaKnown RBP13.13□□□□□ -0.31
DDX39A-212ENST00000590260 PSG9Q00887 426 aa13.13□□□□□ -0.31
DDX39A-212ENST00000590260 FCN2Q15485 313 aa13.13□□□□□ -0.31
DDX39A-212ENST00000590260 PSG3Q16557 428 aa13.13□□□□□ -0.31
DDX39A-212ENST00000590260 EBLN2Q6P2I7 272 aa13.13□□□□□ -0.31
DDX39A-212ENST00000590260 CEMP1Q6PRD7 247 aaPredicted RBP13.13□□□□□ -0.31
DDX39A-212ENST00000590260 Q6ZRG5 221 aa13.13□□□□□ -0.31
DDX39A-212ENST00000590260 C1QTNF4Q9BXJ3 329 aa13.13□□□□□ -0.31
DDX39A-212ENST00000590260 WDR61Q9GZS3 305 aaKnown RBP13.13□□□□□ -0.31
DDX39A-212ENST00000590260 HSPB11Q9Y547 144 aa13.13□□□□□ -0.31
DDX39A-212ENST00000590260 CRXO43186 299 aaPredicted RBP13.12□□□□□ -0.31
DDX39A-212ENST00000590260 BPIFA4PQ86YQ2 179 aa13.12□□□□□ -0.31
DDX39A-212ENST00000590260 OR1L4Q8NGR5 311 aa13.12□□□□□ -0.31
DDX39A-212ENST00000590260 CELA1Q9UNI1 258 aa13.12□□□□□ -0.31
DDX39A-212ENST00000590260 RFNGQ9Y644 331 aa13.12□□□□□ -0.31
DDX39A-212ENST00000590260 PRAC2D3DTV9 90 aa13.11□□□□□ -0.31
DDX39A-212ENST00000590260 MPDU1O75352 247 aa13.11□□□□□ -0.31
DDX39A-212ENST00000590260 ZNF738Q8NE65 137 aa13.11□□□□□ -0.31
DDX39A-212ENST00000590260 C11orf45Q8TAV5 145 aa13.11□□□□□ -0.31
DDX39A-212ENST00000590260 PHLDA1Q8WV24 401 aaPredicted RBP13.11□□□□□ -0.31
DDX39A-212ENST00000590260 PFDN5Q99471 154 aa13.11□□□□□ -0.31
DDX39A-212ENST00000590260 MFFQ9GZY8 342 aa13.11□□□□□ -0.31
DDX39A-212ENST00000590260 HRH4Q9H3N8 390 aa13.11□□□□□ -0.31
DDX39A-212ENST00000590260 WFDC1Q9HC57 220 aa13.11□□□□□ -0.31
DDX39A-212ENST00000590260 ZNF586Q9NXT0 402 aa13.11□□□□□ -0.31
DDX39A-212ENST00000590260 CXCL2P19875 107 aa13.1□□□□□ -0.31
DDX39A-212ENST00000590260 RPL12P30050 165 aaKnown RBP13.1□□□□□ -0.31
DDX39A-212ENST00000590260 Q5BKY6 102 aa13.1□□□□□ -0.31
DDX39A-212ENST00000590260 LCN15Q6UWW0 184 aa13.1□□□□□ -0.31
DDX39A-212ENST00000590260 S100A7AQ86SG5 101 aa13.1□□□□□ -0.31
DDX39A-212ENST00000590260 OR8A1Q8NGG7 326 aa13.1□□□□□ -0.31
DDX39A-212ENST00000590260 FAM167A-AS1Q96KT0 104 aa13.1□□□□□ -0.31
DDX39A-212ENST00000590260 NEU1Q99519 415 aa13.1□□□□□ -0.31
DDX39A-212ENST00000590260 NUPR2A6NF83 97 aa13.09□□□□□ -0.31
DDX39A-212ENST00000590260 M0R2Z0 102 aa13.09□□□□□ -0.31
DDX39A-212ENST00000590260 SPINK13Q1W4C9 94 aa13.09□□□□□ -0.31
DDX39A-212ENST00000590260 ATP5SQ99766 215 aa13.09□□□□□ -0.31
DDX39A-212ENST00000590260 SLC25A2Q9BXI2 301 aa13.09□□□□□ -0.31
DDX39A-212ENST00000590260 SMIM3Q9BZL3 60 aa13.09□□□□□ -0.31
DDX39A-212ENST00000590260 NDUFB4O95168 129 aa13.08□□□□□ -0.32
DDX39A-212ENST00000590260 PYYP10082 97 aa13.08□□□□□ -0.32
DDX39A-212ENST00000590260 HIST1H1AQ02539 215 aaPredicted RBP13.08□□□□□ -0.32
DDX39A-212ENST00000590260 MIR17HGQ75NE6 70 aa13.08□□□□□ -0.32
DDX39A-212ENST00000590260 RPUSD4Q96CM3 377 aaKnown RBP13.08□□□□□ -0.32
DDX39A-212ENST00000590260 SLC50A1Q9BRV3 221 aa13.08□□□□□ -0.32
DDX39A-212ENST00000590260 TMEM14CQ9P0S9 112 aa13.08□□□□□ -0.32
DDX39A-212ENST00000590260 RNF24Q9Y225 148 aa13.08□□□□□ -0.32
DDX39A-212ENST00000590260 IGHV3OR16-12A0A075B7B8 117 aa13.07□□□□□ -0.32
DDX39A-212ENST00000590260 DUSP14O95147 198 aaKnown RBP13.07□□□□□ -0.32
DDX39A-212ENST00000590260 PRM2P04554 102 aa13.07□□□□□ -0.32
DDX39A-212ENST00000590260 PET100P0DJ07 73 aa13.07□□□□□ -0.32
DDX39A-212ENST00000590260 BAP18Q8IXM2 172 aa13.07□□□□□ -0.32
DDX39A-212ENST00000590260 LRRC20Q8TCA0 184 aa13.07□□□□□ -0.32
DDX39A-212ENST00000590260 IGF2BP2-AS1Q96M15 143 aa13.07□□□□□ -0.32
DDX39A-212ENST00000590260 TRBV19A0A075B6N1 114 aa13.06□□□□□ -0.32
DDX39A-212ENST00000590260 KIR3DS1Q14943 382 aa13.06□□□□□ -0.32
DDX39A-212ENST00000590260 C12orf74Q32Q52 190 aa13.06□□□□□ -0.32
DDX39A-212ENST00000590260 Q6ZTC4 211 aa13.06□□□□□ -0.32
DDX39A-212ENST00000590260 ZNF767PQ75MW2 155 aa13.06□□□□□ -0.32
DDX39A-212ENST00000590260 PARD6GQ9BYG4 376 aaPredicted RBP13.06□□□□□ -0.32
DDX39A-212ENST00000590260 MED28Q9H204 178 aa13.06□□□□□ -0.32
DDX39A-212ENST00000590260 VPS13DQ5THJ4 4388 aa13.06□□□□□ -0.32
DDX39A-212ENST00000590260 TRAV12-2A0A075B6T6 113 aa13.05□□□□□ -0.32
DDX39A-212ENST00000590260 BOLA2-SMG1P6H3BVE0 249 aa13.05□□□□□ -0.32
DDX39A-212ENST00000590260 OXA1LQ15070 435 aa13.05□□□□□ -0.32
DDX39A-212ENST00000590260 LINC00476Q8WZB0 136 aa13.05□□□□□ -0.32
DDX39A-212ENST00000590260 ZNF503Q96F45 646 aa13.05□□□□□ -0.32
DDX39A-212ENST00000590260 G3V3Q6 166 aa13.04□□□□□ -0.32
DDX39A-212ENST00000590260 M0R3E3 92 aa13.04□□□□□ -0.32
DDX39A-212ENST00000590260 GUK1Q16774 197 aa13.04□□□□□ -0.32
DDX39A-212ENST00000590260 SMIM9A6NGZ8 99 aa13.03□□□□□ -0.32
DDX39A-212ENST00000590260 ZNF253O75346 499 aa13.03□□□□□ -0.32
DDX39A-212ENST00000590260 EIF3GO75821 320 aaKnown RBP eCLIP13.03□□□□□ -0.32
DDX39A-212ENST00000590260 HIST1H1EP10412 219 aaKnown RBP13.03□□□□□ -0.32
DDX39A-212ENST00000590260 FXYD5Q96DB9 178 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms