RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 CXCL2P19875 107 aa14.78□□□□□ -0.04
DDX39A-207ENST00000588542 C4BPBP20851 252 aa14.78□□□□□ -0.04
DDX39A-207ENST00000588542 HLA-DMBP28068 263 aa14.78□□□□□ -0.04
DDX39A-207ENST00000588542 ZNF266Q14584 549 aa14.78□□□□□ -0.04
DDX39A-207ENST00000588542 LCN15Q6UWW0 184 aa14.78□□□□□ -0.04
DDX39A-207ENST00000588542 MIR17HGQ75NE6 70 aa14.78□□□□□ -0.04
DDX39A-207ENST00000588542 SAT2Q96F10 170 aaPredicted RBP14.78□□□□□ -0.04
DDX39A-207ENST00000588542 FAM167A-AS1Q96KT0 104 aa14.78□□□□□ -0.04
DDX39A-207ENST00000588542 SLC25A2Q9BXI2 301 aa14.78□□□□□ -0.04
DDX39A-207ENST00000588542 HRH4Q9H3N8 390 aa14.78□□□□□ -0.04
DDX39A-207ENST00000588542 EDA2RQ9HAV5 297 aa14.78□□□□□ -0.04
DDX39A-207ENST00000588542 ZNF331Q9NQX6 463 aaPredicted RBP14.78□□□□□ -0.04
DDX39A-207ENST00000588542 TMEM14CQ9P0S9 112 aa14.78□□□□□ -0.04
DDX39A-207ENST00000588542 A0A0J9YX75 114 aa14.77□□□□□ -0.05
DDX39A-207ENST00000588542 H3BTX0 84 aa14.77□□□□□ -0.05
DDX39A-207ENST00000588542 SLC17A3O00476 420 aa14.77□□□□□ -0.05
DDX39A-207ENST00000588542 MORN3Q6PF18 240 aaPredicted RBP14.77□□□□□ -0.05
DDX39A-207ENST00000588542 ZNF586Q9NXT0 402 aa14.77□□□□□ -0.05
DDX39A-207ENST00000588542 TIMM9Q9Y5J7 89 aa14.77□□□□□ -0.05
DDX39A-207ENST00000588542 PYYP10082 97 aa14.76□□□□□ -0.05
DDX39A-207ENST00000588542 LRRC20Q8TCA0 184 aa14.76□□□□□ -0.05
DDX39A-207ENST00000588542 CLUHP3Q96NS8 147 aa14.76□□□□□ -0.05
DDX39A-207ENST00000588542 MRPL32Q9BYC8 188 aaKnown RBP14.76□□□□□ -0.05
DDX39A-207ENST00000588542 FUT9Q9Y231 359 aa14.76□□□□□ -0.05
DDX39A-207ENST00000588542 A8MTW9 85 aa14.75□□□□□ -0.05
DDX39A-207ENST00000588542 ARPC5O15511 151 aa14.75□□□□□ -0.05
DDX39A-207ENST00000588542 PSG3Q16557 428 aa14.75□□□□□ -0.05
DDX39A-207ENST00000588542 HSD17B11Q8NBQ5 300 aa14.75□□□□□ -0.05
DDX39A-207ENST00000588542 OR11H4Q8NGC9 324 aa14.75□□□□□ -0.05
DDX39A-207ENST00000588542 SLC50A1Q9BRV3 221 aa14.75□□□□□ -0.05
DDX39A-207ENST00000588542 CSMD3Q7Z407 3707 aa14.75□□□□□ -0.05
DDX39A-207ENST00000588542 IGKV3-20P01619 116 aa14.74□□□□□ -0.05
DDX39A-207ENST00000588542 ATP6V0CP27449 155 aa14.74□□□□□ -0.05
DDX39A-207ENST00000588542 GUK1Q16774 197 aa14.74□□□□□ -0.05
DDX39A-207ENST00000588542 RPL7L1Q6DKI1 246 aaKnown RBP14.74□□□□□ -0.05
DDX39A-207ENST00000588542 EBLN2Q6P2I7 272 aa14.74□□□□□ -0.05
DDX39A-207ENST00000588542 TRBV19A0A075B6N1 114 aa14.73□□□□□ -0.05
DDX39A-207ENST00000588542 HIST1H1EP10412 219 aaKnown RBP14.73□□□□□ -0.05
DDX39A-207ENST00000588542 TMEM41BQ5BJD5 291 aa14.73□□□□□ -0.05
DDX39A-207ENST00000588542 CSNK1G2-AS1Q8NCQ2 148 aa14.73□□□□□ -0.05
DDX39A-207ENST00000588542 ZNF738Q8NE65 137 aa14.73□□□□□ -0.05
DDX39A-207ENST00000588542 OR4B1Q8NGF8 309 aa14.73□□□□□ -0.05
DDX39A-207ENST00000588542 ST6GAL2Q96JF0 529 aa14.73□□□□□ -0.05
DDX39A-207ENST00000588542 PSMG3Q9BT73 122 aaPredicted RBP14.73□□□□□ -0.05
DDX39A-207ENST00000588542 MFFQ9GZY8 342 aa14.73□□□□□ -0.05
DDX39A-207ENST00000588542 ZNF253O75346 499 aa14.72□□□□□ -0.05
DDX39A-207ENST00000588542 NDUFB4O95168 129 aa14.72□□□□□ -0.05
DDX39A-207ENST00000588542 ZNF705DP0CH99 300 aaPredicted RBP14.72□□□□□ -0.05
DDX39A-207ENST00000588542 ZNF705BP0CI00 300 aaPredicted RBP14.72□□□□□ -0.05
DDX39A-207ENST00000588542 PRB4P10163 310 aaPredicted RBP14.72□□□□□ -0.05
DDX39A-207ENST00000588542 M6PRP20645 277 aa14.72□□□□□ -0.05
DDX39A-207ENST00000588542 RAB2AP61019 212 aa14.72□□□□□ -0.05
DDX39A-207ENST00000588542 ACOT6Q3I5F7 207 aaPredicted RBP14.72□□□□□ -0.05
DDX39A-207ENST00000588542 OR2G3Q8NGZ4 309 aa14.72□□□□□ -0.05
DDX39A-207ENST00000588542 ZNF503Q96F45 646 aa14.72□□□□□ -0.05
DDX39A-207ENST00000588542 SH3BGRL3Q9H299 93 aa14.72□□□□□ -0.05
DDX39A-207ENST00000588542 OR51M1Q9H341 326 aa14.72□□□□□ -0.05
DDX39A-207ENST00000588542 HMSDA8MTL9 139 aa14.71□□□□□ -0.05
DDX39A-207ENST00000588542 ZNF705FA8MVS1 300 aaPredicted RBP14.71□□□□□ -0.05
DDX39A-207ENST00000588542 NUTF2P61970 127 aaKnown RBP14.71□□□□□ -0.05
DDX39A-207ENST00000588542 RHOBP62745 196 aa14.71□□□□□ -0.05
DDX39A-207ENST00000588542 AMTNQ6UX39 209 aa14.71□□□□□ -0.05
DDX39A-207ENST00000588542 RPUSD4Q96CM3 377 aaKnown RBP14.71□□□□□ -0.05
DDX39A-207ENST00000588542 CYTL1Q9NRR1 136 aa14.71□□□□□ -0.05
DDX39A-207ENST00000588542 CLEC5AQ9NY25 188 aa14.71□□□□□ -0.05
DDX39A-207ENST00000588542 EIF3GO75821 320 aaKnown RBP eCLIP14.7□□□□□ -0.06
DDX39A-207ENST00000588542 CNN1P51911 297 aaKnown RBP14.7□□□□□ -0.06
DDX39A-207ENST00000588542 FXYD7P58549 80 aa14.7□□□□□ -0.06
DDX39A-207ENST00000588542 PSG9Q00887 426 aa14.7□□□□□ -0.06
DDX39A-207ENST00000588542 OR8A1Q8NGG7 326 aa14.7□□□□□ -0.06
DDX39A-207ENST00000588542 FXYD5Q96DB9 178 aa14.7□□□□□ -0.06
DDX39A-207ENST00000588542 RARRES2Q99969 163 aa14.7□□□□□ -0.06
DDX39A-207ENST00000588542 PAXXQ9BUH6 204 aa14.7□□□□□ -0.06
DDX39A-207ENST00000588542 SLC35B3Q9H1N7 401 aa14.7□□□□□ -0.06
DDX39A-207ENST00000588542 XCL2Q9UBD3 114 aa14.7□□□□□ -0.06
DDX39A-207ENST00000588542 BORCS7-ASMTA0A0B4J1R7 106 aa14.69□□□□□ -0.06
DDX39A-207ENST00000588542 PRAC2D3DTV9 90 aa14.69□□□□□ -0.06
DDX39A-207ENST00000588542 TAAR5O14804 337 aa14.69□□□□□ -0.06
DDX39A-207ENST00000588542 DUSP14O95147 198 aaKnown RBP14.69□□□□□ -0.06
DDX39A-207ENST00000588542 NBEAP1P0C6P0 100 aa14.69□□□□□ -0.06
DDX39A-207ENST00000588542 SERF2P84101 59 aa14.69□□□□□ -0.06
DDX39A-207ENST00000588542 PDE6HQ13956 83 aa14.69□□□□□ -0.06
DDX39A-207ENST00000588542 ZNF345Q14585 488 aa14.69□□□□□ -0.06
DDX39A-207ENST00000588542 KCNRGQ8N5I3 272 aa14.69□□□□□ -0.06
DDX39A-207ENST00000588542 OR10G4Q8NGN3 311 aa14.69□□□□□ -0.06
DDX39A-207ENST00000588542 OR10G9Q8NGN4 311 aa14.69□□□□□ -0.06
DDX39A-207ENST00000588542 OR10G7Q8NGN6 311 aa14.69□□□□□ -0.06
DDX39A-207ENST00000588542 OR11H2Q8NH07 326 aa14.69□□□□□ -0.06
DDX39A-207ENST00000588542 BLNKQ8WV28 456 aa14.69□□□□□ -0.06
DDX39A-207ENST00000588542 RNF141Q8WVD5 230 aa14.69□□□□□ -0.06
DDX39A-207ENST00000588542 OR7C2O60412 319 aa14.68□□□□□ -0.06
DDX39A-207ENST00000588542 OR10J4P0C629 311 aa14.68□□□□□ -0.06
DDX39A-207ENST00000588542 FAM122CQ6P4D5 195 aa14.68□□□□□ -0.06
DDX39A-207ENST00000588542 RPP25LQ8N5L8 163 aaKnown RBP14.68□□□□□ -0.06
DDX39A-207ENST00000588542 C1QTNF4Q9BXJ3 329 aa14.68□□□□□ -0.06
DDX39A-207ENST00000588542 STARD9Q9P2P6 4700 aa14.67□□□□□ -0.06
DDX39A-207ENST00000588542 A0A0J9YWU9 116 aa14.67□□□□□ -0.06
DDX39A-207ENST00000588542 ZNF705EA8MWA4 302 aaPredicted RBP14.67□□□□□ -0.06
DDX39A-207ENST00000588542 JTBO76095 146 aa14.67□□□□□ -0.06
DDX39A-207ENST00000588542 HIST1H1AQ02539 215 aaPredicted RBP14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms