RNA–Protein interactions for RNA: ENST00000588009.1

TUBD1-208, Transcript of tubulin delta 1, human

TSL 3

Gene TUBD1, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TUBD1-208	ENST00000588009	TMEM56-RWDD3	S4R434	201 aa		2.59	□□□□□ -1.99
TUBD1-208	ENST00000588009	TENM2	Q9NT68	2774 aa		2.59	□□□□□ -2
TUBD1-208	ENST00000588009	DOCK1	Q14185	1865 aa		2.58	□□□□□ -2
TUBD1-208	ENST00000588009	ATG12	O94817	140 aa		2.58	□□□□□ -2
TUBD1-208	ENST00000588009	HLA-DMB	P28068	263 aa		2.58	□□□□□ -2
TUBD1-208	ENST00000588009	TPI1	P60174	286 aa		2.58	□□□□□ -2
TUBD1-208	ENST00000588009	CCL20	P78556	96 aa		2.58	□□□□□ -2
TUBD1-208	ENST00000588009	MOG	Q16653	247 aa		2.58	□□□□□ -2
TUBD1-208	ENST00000588009	C12orf74	Q32Q52	190 aa		2.58	□□□□□ -2
TUBD1-208	ENST00000588009	PABPC1L2A	Q5JQF8	200 aa		2.58	□□□□□ -2
TUBD1-208	ENST00000588009	PP632	Q6XCG6	107 aa		2.58	□□□□□ -2
TUBD1-208	ENST00000588009	C12orf45	Q8N5I9	185 aa	Predicted RBP	2.58	□□□□□ -2
TUBD1-208	ENST00000588009	GDPD1	Q8N9F7	314 aa		2.58	□□□□□ -2
TUBD1-208	ENST00000588009	OR11H6	Q8NGC7	330 aa		2.58	□□□□□ -2
TUBD1-208	ENST00000588009	OR5J2	Q8NH18	312 aa		2.58	□□□□□ -2
TUBD1-208	ENST00000588009	MRPS24	Q96EL2	167 aa	Known RBP	2.58	□□□□□ -2
TUBD1-208	ENST00000588009	KLF6	Q99612	283 aa	Predicted RBP	2.58	□□□□□ -2
TUBD1-208	ENST00000588009		Q9BRP9	147 aa		2.58	□□□□□ -2
TUBD1-208	ENST00000588009	GINS3	Q9BRX5	216 aa		2.58	□□□□□ -2
TUBD1-208	ENST00000588009	HHLA3	Q9XRX5	114 aa		2.58	□□□□□ -2
TUBD1-208	ENST00000588009	GGT3P	A6NGU5	568 aa		2.57	□□□□□ -2
TUBD1-208	ENST00000588009	FNDC10	F2Z333	226 aa		2.57	□□□□□ -2
TUBD1-208	ENST00000588009		H3BT86	120 aa		2.57	□□□□□ -2
TUBD1-208	ENST00000588009	ZNF682	O95780	498 aa		2.57	□□□□□ -2
TUBD1-208	ENST00000588009	IGKV1-5	P01602	117 aa		2.57	□□□□□ -2
TUBD1-208	ENST00000588009	PRM2	P04554	102 aa		2.57	□□□□□ -2
TUBD1-208	ENST00000588009	SERPINE1	P05121	402 aa		2.57	□□□□□ -2
TUBD1-208	ENST00000588009	LGALS1	P09382	135 aa	Known RBP	2.57	□□□□□ -2
TUBD1-208	ENST00000588009	HBA1	P69905	142 aa		2.57	□□□□□ -2
TUBD1-208	ENST00000588009	ALX1	Q15699	326 aa		2.57	□□□□□ -2
TUBD1-208	ENST00000588009	ZNF181	Q2M3W8	571 aa		2.57	□□□□□ -2
TUBD1-208	ENST00000588009	C3orf33	Q6P1S2	294 aa		2.57	□□□□□ -2
TUBD1-208	ENST00000588009	CT55	Q8WUE5	264 aa		2.57	□□□□□ -2
TUBD1-208	ENST00000588009	ACOT12	Q8WYK0	555 aa		2.57	□□□□□ -2
TUBD1-208	ENST00000588009	DNAJC30	Q96LL9	226 aa		2.57	□□□□□ -2
TUBD1-208	ENST00000588009	DDA1	Q9BW61	102 aa		2.57	□□□□□ -2
TUBD1-208	ENST00000588009	OR8D2	Q9GZM6	311 aa		2.57	□□□□□ -2
TUBD1-208	ENST00000588009	C11orf68	Q9H3H3	251 aa	Known RBP	2.57	□□□□□ -2
TUBD1-208	ENST00000588009	SS18L2	Q9UHA2	77 aa		2.57	□□□□□ -2
TUBD1-208	ENST00000588009	VPS13C	Q709C8	3753 aa		2.57	□□□□□ -2
TUBD1-208	ENST00000588009	IGKV1D-43	A0A0B4J1Z2	117 aa		2.56	□□□□□ -2
TUBD1-208	ENST00000588009		A0A1B0GV72	72 aa		2.56	□□□□□ -2
TUBD1-208	ENST00000588009	DPRX	A6NFQ7	191 aa		2.56	□□□□□ -2
TUBD1-208	ENST00000588009	MFSD11	O43934	449 aa		2.56	□□□□□ -2
TUBD1-208	ENST00000588009	CREBL2	O60519	120 aa	Predicted RBP	2.56	□□□□□ -2
TUBD1-208	ENST00000588009	C1QA	P02745	245 aa		2.56	□□□□□ -2
TUBD1-208	ENST00000588009	SULT1A3	P0DMM9	295 aa		2.56	□□□□□ -2
TUBD1-208	ENST00000588009	SULT1A4	P0DMN0	295 aa		2.56	□□□□□ -2
TUBD1-208	ENST00000588009	PSMB8	P28062	276 aa		2.56	□□□□□ -2
TUBD1-208	ENST00000588009	RPL28	P46779	137 aa	Known RBP	2.56	□□□□□ -2
TUBD1-208	ENST00000588009	HINT1	P49773	126 aa	Predicted RBP	2.56	□□□□□ -2
TUBD1-208	ENST00000588009	HIST1H4A	P62805	103 aa	Known RBP	2.56	□□□□□ -2
TUBD1-208	ENST00000588009	MEF2B	Q02080	365 aa	Predicted RBP	2.56	□□□□□ -2
TUBD1-208	ENST00000588009	ZNF90	Q03938	601 aa		2.56	□□□□□ -2
TUBD1-208	ENST00000588009	RPL18	Q07020	188 aa	Known RBP	2.56	□□□□□ -2
TUBD1-208	ENST00000588009	AADACL3	Q5VUY0	350 aa		2.56	□□□□□ -2
TUBD1-208	ENST00000588009	ZNF705A	Q6ZN79	300 aa	Predicted RBP	2.56	□□□□□ -2
TUBD1-208	ENST00000588009	GOLT1A	Q6ZVE7	132 aa		2.56	□□□□□ -2
TUBD1-208	ENST00000588009	SMR3A	Q99954	134 aa		2.56	□□□□□ -2
TUBD1-208	ENST00000588009	TP73-AS1	Q9UF72	201 aa		2.56	□□□□□ -2
TUBD1-208	ENST00000588009	NDUFAF1	Q9Y375	327 aa		2.56	□□□□□ -2
TUBD1-208	ENST00000588009	TIMM22	Q9Y584	194 aa		2.56	□□□□□ -2
TUBD1-208	ENST00000588009	COL4A2	P08572	1712 aa		2.56	□□□□□ -2
TUBD1-208	ENST00000588009	PLXNA4	Q9HCM2	1894 aa		2.56	□□□□□ -2
TUBD1-208	ENST00000588009	MALRD1	Q5VYJ5	2156 aa		2.56	□□□□□ -2
TUBD1-208	ENST00000588009	F5	P12259	2224 aa		2.56	□□□□□ -2
TUBD1-208	ENST00000588009	RYR2	Q92736	4967 aa		2.56	□□□□□ -2
TUBD1-208	ENST00000588009	PIR	O00625	290 aa		2.55	□□□□□ -2
TUBD1-208	ENST00000588009	IGHV3-7	P01780	117 aa		2.55	□□□□□ -2
TUBD1-208	ENST00000588009	HIST1H2BO	P23527	126 aa		2.55	□□□□□ -2
TUBD1-208	ENST00000588009	MSN	P26038	577 aa	Known RBP	2.55	□□□□□ -2
TUBD1-208	ENST00000588009	HIST1H2BB	P33778	126 aa		2.55	□□□□□ -2
TUBD1-208	ENST00000588009	HIST1H2BD	P58876	126 aa		2.55	□□□□□ -2
TUBD1-208	ENST00000588009	HIST1H2BC	P62807	126 aa		2.55	□□□□□ -2
TUBD1-208	ENST00000588009	ABCA4	P78363	2273 aa		2.55	□□□□□ -2
TUBD1-208	ENST00000588009	TFAM	Q00059	246 aa	Known RBP	2.55	□□□□□ -2
TUBD1-208	ENST00000588009	ESPL1	Q14674	2120 aa		2.55	□□□□□ -2
TUBD1-208	ENST00000588009	HIST2H2BE	Q16778	126 aa		2.55	□□□□□ -2
TUBD1-208	ENST00000588009	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	2.55	□□□□□ -2
TUBD1-208	ENST00000588009	LCE1C	Q5T751	118 aa		2.55	□□□□□ -2
TUBD1-208	ENST00000588009	LCE1B	Q5T7P3	118 aa		2.55	□□□□□ -2
TUBD1-208	ENST00000588009	FKBP1C	Q5VVH2	108 aa		2.55	□□□□□ -2
TUBD1-208	ENST00000588009	LYZL1	Q6UWQ5	148 aa		2.55	□□□□□ -2
TUBD1-208	ENST00000588009	DYNAP	Q8N1N2	210 aa		2.55	□□□□□ -2
TUBD1-208	ENST00000588009	HIST1H2BH	Q93079	126 aa		2.55	□□□□□ -2
TUBD1-208	ENST00000588009	TOMM6	Q96B49	74 aa		2.55	□□□□□ -2
TUBD1-208	ENST00000588009	HIST1H2BN	Q99877	126 aa		2.55	□□□□□ -2
TUBD1-208	ENST00000588009	HIST1H2BM	Q99879	126 aa		2.55	□□□□□ -2
TUBD1-208	ENST00000588009	DERL1	Q9BUN8	251 aa		2.55	□□□□□ -2
TUBD1-208	ENST00000588009	MIXL1	Q9H2W2	232 aa		2.55	□□□□□ -2
TUBD1-208	ENST00000588009	ZNF106	Q9H2Y7	1883 aa	Known RBP	2.55	□□□□□ -2
TUBD1-208	ENST00000588009	NDUFB11	Q9NX14	153 aa		2.55	□□□□□ -2
TUBD1-208	ENST00000588009	NAT8	Q9UHE5	227 aa		2.55	□□□□□ -2
TUBD1-208	ENST00000588009	PYCARD	Q9ULZ3	195 aa		2.55	□□□□□ -2
TUBD1-208	ENST00000588009	SLC35A3	Q9Y2D2	325 aa		2.55	□□□□□ -2
TUBD1-208	ENST00000588009	TIMM9	Q9Y5J7	89 aa		2.55	□□□□□ -2
TUBD1-208	ENST00000588009	SVEP1	Q4LDE5	3571 aa		2.54	□□□□□ -2
TUBD1-208	ENST00000588009	TRAV9-1	A0A075B6T8	112 aa		2.54	□□□□□ -2
TUBD1-208	ENST00000588009	TRAV7	A0A075B6U4	112 aa		2.54	□□□□□ -2
TUBD1-208	ENST00000588009	TRAV41	A0A0B4J266	112 aa		2.54	□□□□□ -2

Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms