RNA–Protein interactions for RNA: ENST00000587580.1

CHAF1A-205, Transcript of chromatin assembly factor 1 subunit A, humanhuman

TSL 3

Gene CHAF1A, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-205ENST00000587580 C11orf45Q8TAV5 145 aa17.03■□□□□ 0.32
CHAF1A-205ENST00000587580 CHAC2Q8WUX2 184 aa17.03■□□□□ 0.32
CHAF1A-205ENST00000587580 NPCDR1Q9BY65 106 aa17.03■□□□□ 0.32
CHAF1A-205ENST00000587580 SLC35B3Q9H1N7 401 aa17.03■□□□□ 0.32
CHAF1A-205ENST00000587580 THAP6Q8TBB0 222 aa17.02■□□□□ 0.32
CHAF1A-205ENST00000587580 RNF126Q9BV68 326 aa17.02■□□□□ 0.32
CHAF1A-205ENST00000587580 SNRPCP09234 159 aaKnown RBP17.01■□□□□ 0.31
CHAF1A-205ENST00000587580 RBMY1A1P0DJD3 496 aaKnown RBP17.01■□□□□ 0.31
CHAF1A-205ENST00000587580 RBMY1CP0DJD4 496 aa17.01■□□□□ 0.31
CHAF1A-205ENST00000587580 CXCL2P19875 107 aa17.01■□□□□ 0.31
CHAF1A-205ENST00000587580 CXCL3P19876 107 aa17.01■□□□□ 0.31
CHAF1A-205ENST00000587580 HLA-DMBP28068 263 aa17.01■□□□□ 0.31
CHAF1A-205ENST00000587580 NANOS2P60321 138 aaKnown RBP17.01■□□□□ 0.31
CHAF1A-205ENST00000587580 RBMY1FQ15415 496 aaKnown RBP17.01■□□□□ 0.31
CHAF1A-205ENST00000587580 LCN15Q6UWW0 184 aa17.01■□□□□ 0.31
CHAF1A-205ENST00000587580 MFFQ9GZY8 342 aa17.01■□□□□ 0.31
CHAF1A-205ENST00000587580 TENM2Q9NT68 2774 aa17■□□□□ 0.31
CHAF1A-205ENST00000587580 JTBO76095 146 aa17■□□□□ 0.31
CHAF1A-205ENST00000587580 CEMP1Q6PRD7 247 aaPredicted RBP17■□□□□ 0.31
CHAF1A-205ENST00000587580 MBD2Q9UBB5 411 aa17■□□□□ 0.31
CHAF1A-205ENST00000587580 RYR3Q15413 4870 aa16.99■□□□□ 0.31
CHAF1A-205ENST00000587580 TRAV5A0A0B4J249 113 aa16.99■□□□□ 0.31
CHAF1A-205ENST00000587580 A8MTW9 85 aa16.99■□□□□ 0.31
CHAF1A-205ENST00000587580 DUSP14O95147 198 aaKnown RBP16.99■□□□□ 0.31
CHAF1A-205ENST00000587580 ZNF705DP0CH99 300 aaPredicted RBP16.99■□□□□ 0.31
CHAF1A-205ENST00000587580 ZNF705BP0CI00 300 aaPredicted RBP16.99■□□□□ 0.31
CHAF1A-205ENST00000587580 CNN1P51911 297 aaKnown RBP16.99■□□□□ 0.31
CHAF1A-205ENST00000587580 PSG3Q16557 428 aa16.99■□□□□ 0.31
CHAF1A-205ENST00000587580 PHLDA1Q8WV24 401 aaPredicted RBP16.99■□□□□ 0.31
CHAF1A-205ENST00000587580 SLC50A1Q9BRV3 221 aa16.99■□□□□ 0.31
CHAF1A-205ENST00000587580 H3BTX0 84 aa16.98■□□□□ 0.31
CHAF1A-205ENST00000587580 AMTNQ6UX39 209 aa16.98■□□□□ 0.31
CHAF1A-205ENST00000587580 ZNF705AQ6ZN79 300 aaPredicted RBP16.98■□□□□ 0.31
CHAF1A-205ENST00000587580 WDR61Q9GZS3 305 aaKnown RBP16.98■□□□□ 0.31
CHAF1A-205ENST00000587580 ZNF331Q9NQX6 463 aaPredicted RBP16.98■□□□□ 0.31
CHAF1A-205ENST00000587580 HSPB11Q9Y547 144 aa16.98■□□□□ 0.31
CHAF1A-205ENST00000587580 IGHV3OR16-12A0A075B7B8 117 aa16.97■□□□□ 0.31
CHAF1A-205ENST00000587580 IGLC2P0DOY2 106 aa16.97■□□□□ 0.31
CHAF1A-205ENST00000587580 ATP5SQ99766 215 aa16.97■□□□□ 0.31
CHAF1A-205ENST00000587580 HRH4Q9H3N8 390 aa16.97■□□□□ 0.31
CHAF1A-205ENST00000587580 KLK5Q9Y337 293 aaPredicted RBP16.97■□□□□ 0.31
CHAF1A-205ENST00000587580 SLC17A3O00476 420 aa16.96■□□□□ 0.31
CHAF1A-205ENST00000587580 PRB4P10163 310 aaPredicted RBP16.96■□□□□ 0.31
CHAF1A-205ENST00000587580 RPL12P30050 165 aaKnown RBP16.96■□□□□ 0.31
CHAF1A-205ENST00000587580 HIST1H1AQ02539 215 aaPredicted RBP16.96■□□□□ 0.31
CHAF1A-205ENST00000587580 GCSAMLQ5JQS6 135 aa16.96■□□□□ 0.31
CHAF1A-205ENST00000587580 OR11H7Q8NGC8 314 aa16.96■□□□□ 0.31
CHAF1A-205ENST00000587580 LYSTQ99698 3801 aa16.96■□□□□ 0.31
CHAF1A-205ENST00000587580 MED28Q9H204 178 aa16.96■□□□□ 0.31
CHAF1A-205ENST00000587580 ZNF705FA8MVS1 300 aaPredicted RBP16.95■□□□□ 0.3
CHAF1A-205ENST00000587580 H3BQ15 152 aa16.95■□□□□ 0.3
CHAF1A-205ENST00000587580 OR8A1Q8NGG7 326 aa16.95■□□□□ 0.3
CHAF1A-205ENST00000587580 RPUSD4Q96CM3 377 aaKnown RBP16.95■□□□□ 0.3
CHAF1A-205ENST00000587580 NEU1Q99519 415 aa16.95■□□□□ 0.3
CHAF1A-205ENST00000587580 SMIM3Q9BZL3 60 aa16.95■□□□□ 0.3
CHAF1A-205ENST00000587580 KCNIP2Q9NS61 270 aa16.95■□□□□ 0.3
CHAF1A-205ENST00000587580 GOLT1BQ9Y3E0 138 aa16.95■□□□□ 0.3
CHAF1A-205ENST00000587580 FCN2Q15485 313 aa16.94■□□□□ 0.3
CHAF1A-205ENST00000587580 SPINK13Q1W4C9 94 aa16.94■□□□□ 0.3
CHAF1A-205ENST00000587580 C17orf112F2Z3M2 114 aa16.93■□□□□ 0.3
CHAF1A-205ENST00000587580 M0R2Z0 102 aa16.93■□□□□ 0.3
CHAF1A-205ENST00000587580 AMBPP02760 352 aa16.93■□□□□ 0.3
CHAF1A-205ENST00000587580 GUK1Q16774 197 aa16.93■□□□□ 0.3
CHAF1A-205ENST00000587580 C1orf158Q8N1D5 194 aa16.93■□□□□ 0.3
CHAF1A-205ENST00000587580 SAT2Q96F10 170 aaPredicted RBP16.93■□□□□ 0.3
CHAF1A-205ENST00000587580 SACSQ9NZJ4 4579 aa16.93■□□□□ 0.3
CHAF1A-205ENST00000587580 SMIM9A6NGZ8 99 aa16.92■□□□□ 0.3
CHAF1A-205ENST00000587580 RHOBP62745 196 aa16.92■□□□□ 0.3
CHAF1A-205ENST00000587580 IGF2BP2-AS1Q96M15 143 aa16.92■□□□□ 0.3
CHAF1A-205ENST00000587580 ZNF586Q9NXT0 402 aa16.92■□□□□ 0.3
CHAF1A-205ENST00000587580 CELA1Q9UNI1 258 aa16.92■□□□□ 0.3
CHAF1A-205ENST00000587580 BOLA2-SMG1P6H3BVE0 249 aa16.91■□□□□ 0.3
CHAF1A-205ENST00000587580 IFNA5P01569 189 aa16.91■□□□□ 0.3
CHAF1A-205ENST00000587580 PPP1R14DQ9NXH3 145 aa16.91■□□□□ 0.3
CHAF1A-205ENST00000587580 TMEM14CQ9P0S9 112 aa16.91■□□□□ 0.3
CHAF1A-205ENST00000587580 RFNGQ9Y644 331 aa16.91■□□□□ 0.3
CHAF1A-205ENST00000587580 INSP01308 110 aa16.9■□□□□ 0.3
CHAF1A-205ENST00000587580 PYYP10082 97 aa16.9■□□□□ 0.3
CHAF1A-205ENST00000587580 RGS21Q2M5E4 152 aa16.9■□□□□ 0.3
CHAF1A-205ENST00000587580 BAP18Q8IXM2 172 aa16.9■□□□□ 0.3
CHAF1A-205ENST00000587580 TMEM208Q9BTX3 173 aa16.9■□□□□ 0.3
CHAF1A-205ENST00000587580 SLC25A2Q9BXI2 301 aa16.9■□□□□ 0.3
CHAF1A-205ENST00000587580 CRXO43186 299 aaPredicted RBP16.89■□□□□ 0.29
CHAF1A-205ENST00000587580 ZNF253O75346 499 aa16.89■□□□□ 0.29
CHAF1A-205ENST00000587580 HBE1P02100 147 aa16.89■□□□□ 0.29
CHAF1A-205ENST00000587580 MIR17HGQ75NE6 70 aa16.89■□□□□ 0.29
CHAF1A-205ENST00000587580 SCGB1C1Q8TD33 95 aa16.89■□□□□ 0.29
CHAF1A-205ENST00000587580 RYR2Q92736 4967 aa16.89■□□□□ 0.29
CHAF1A-205ENST00000587580 ALMS1Q8TCU4 4167 aa16.89■□□□□ 0.29
CHAF1A-205ENST00000587580 TRBV19A0A075B6N1 114 aa16.88■□□□□ 0.29
CHAF1A-205ENST00000587580 TMEM189A5PLL7 270 aa16.88■□□□□ 0.29
CHAF1A-205ENST00000587580 PRAC2D3DTV9 90 aa16.88■□□□□ 0.29
CHAF1A-205ENST00000587580 HIST1H1EP10412 219 aaKnown RBP16.88■□□□□ 0.29
CHAF1A-205ENST00000587580 EMP1P54849 157 aa16.88■□□□□ 0.29
CHAF1A-205ENST00000587580 Q6ZTC4 211 aa16.88■□□□□ 0.29
CHAF1A-205ENST00000587580 MRPL32Q9BYC8 188 aaKnown RBP16.88■□□□□ 0.29
CHAF1A-205ENST00000587580 TRAV12-2A0A075B6T6 113 aa16.87■□□□□ 0.29
CHAF1A-205ENST00000587580 C11orf94C9JXX5 98 aa16.87■□□□□ 0.29
CHAF1A-205ENST00000587580 FFAR4Q5NUL3 377 aa16.87■□□□□ 0.29
CHAF1A-205ENST00000587580 OR10J6PQ8NGY7 276 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms