RNA–Protein interactions for RNA: ENST00000586548.5

CIRBP-208, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-208ENST00000586548 PHOX2AO14813 284 aa17.18■□□□□ 0.34
CIRBP-208ENST00000586548 C1orf194Q5T5A4 169 aa17.18■□□□□ 0.34
CIRBP-208ENST00000586548 SGK494Q96LW2 274 aa17.18■□□□□ 0.34
CIRBP-208ENST00000586548 MLST8Q9BVC4 326 aa17.18■□□□□ 0.34
CIRBP-208ENST00000586548 SMAD5-AS1Q9Y6J3 95 aa17.18■□□□□ 0.34
CIRBP-208ENST00000586548 ZNF320A2RRD8 509 aa17.18■□□□□ 0.34
CIRBP-208ENST00000586548 K7EQM0 130 aa17.18■□□□□ 0.34
CIRBP-208ENST00000586548 SNRPEP62304 92 aaKnown RBP17.18■□□□□ 0.34
CIRBP-208ENST00000586548 Q86TA4 180 aa17.18■□□□□ 0.34
CIRBP-208ENST00000586548 CIARTQ8N365 385 aaPredicted RBP17.18■□□□□ 0.34
CIRBP-208ENST00000586548 ARL6IP6Q8N6S5 226 aa17.18■□□□□ 0.34
CIRBP-208ENST00000586548 TMEM75Q8N9X5 138 aa17.18■□□□□ 0.34
CIRBP-208ENST00000586548 ZANQ9Y493 2812 aa17.17■□□□□ 0.34
CIRBP-208ENST00000586548 A0A087X0K7 114 aa17.17■□□□□ 0.34
CIRBP-208ENST00000586548 TMEM95Q3KNT9 176 aa17.17■□□□□ 0.34
CIRBP-208ENST00000586548 U3KQE9 123 aa17.17■□□□□ 0.34
CIRBP-208ENST00000586548 TMEM89A2RUT3 159 aa17.16■□□□□ 0.34
CIRBP-208ENST00000586548 HIST1H2BKO60814 126 aa17.16■□□□□ 0.34
CIRBP-208ENST00000586548 IGLV2-11P01706 119 aa17.16■□□□□ 0.34
CIRBP-208ENST00000586548 IGHG4P01861 327 aa17.16■□□□□ 0.34
CIRBP-208ENST00000586548 HIST1H2BJP06899 126 aa17.16■□□□□ 0.34
CIRBP-208ENST00000586548 HIST1H2BOP23527 126 aa17.16■□□□□ 0.34
CIRBP-208ENST00000586548 HIST1H2BBP33778 126 aa17.16■□□□□ 0.34
CIRBP-208ENST00000586548 HIST1H2BDP58876 126 aa17.16■□□□□ 0.34
CIRBP-208ENST00000586548 HIST1H2BCP62807 126 aa17.16■□□□□ 0.34
CIRBP-208ENST00000586548 HIST2H2BEQ16778 126 aa17.16■□□□□ 0.34
CIRBP-208ENST00000586548 HIST2H2BFQ5QNW6 126 aaPredicted RBP17.16■□□□□ 0.34
CIRBP-208ENST00000586548 FRZBQ92765 325 aa17.16■□□□□ 0.34
CIRBP-208ENST00000586548 HIST1H2BHQ93079 126 aa17.16■□□□□ 0.34
CIRBP-208ENST00000586548 HIST1H2BNQ99877 126 aa17.16■□□□□ 0.34
CIRBP-208ENST00000586548 HIST1H2BMQ99879 126 aa17.16■□□□□ 0.34
CIRBP-208ENST00000586548 FOXC2Q99958 501 aa17.16■□□□□ 0.34
CIRBP-208ENST00000586548 PRSS22Q9GZN4 317 aa17.16■□□□□ 0.34
CIRBP-208ENST00000586548 ZNF705GA8MUZ8 300 aaPredicted RBP17.16■□□□□ 0.34
CIRBP-208ENST00000586548 DIRC3C9JPN6 131 aa17.16■□□□□ 0.34
CIRBP-208ENST00000586548 NDUFA4O00483 81 aa17.16■□□□□ 0.34
CIRBP-208ENST00000586548 HOXA3O43365 443 aaPredicted RBP17.16■□□□□ 0.34
CIRBP-208ENST00000586548 NBPF19A0A087WUL8 3843 aa17.15■□□□□ 0.34
CIRBP-208ENST00000586548 SERTM2A0A1B0GWG4 89 aa17.15■□□□□ 0.34
CIRBP-208ENST00000586548 TRBV12-3P01733 135 aa17.15■□□□□ 0.34
CIRBP-208ENST00000586548 CSN1S1P47710 185 aa17.15■□□□□ 0.34
CIRBP-208ENST00000586548 OR4X2Q8NGF9 303 aa17.15■□□□□ 0.34
CIRBP-208ENST00000586548 NPFFR1Q9GZQ6 430 aa17.15■□□□□ 0.34
CIRBP-208ENST00000586548 TRAV8-1A0A0A6YYK1 113 aa17.14■□□□□ 0.33
CIRBP-208ENST00000586548 UBE2CO00762 179 aa17.14■□□□□ 0.33
CIRBP-208ENST00000586548 SMAD7O15105 426 aaKnown RBP17.14■□□□□ 0.33
CIRBP-208ENST00000586548 GATCO43716 136 aaKnown RBP17.14■□□□□ 0.33
CIRBP-208ENST00000586548 IGHV3-11P01762 117 aa17.14■□□□□ 0.33
CIRBP-208ENST00000586548 TRGC1P0CF51 173 aa17.14■□□□□ 0.33
CIRBP-208ENST00000586548 PSMB8P28062 276 aa17.14■□□□□ 0.33
CIRBP-208ENST00000586548 ACTL10Q5JWF8 245 aa17.14■□□□□ 0.33
CIRBP-208ENST00000586548 FAM209BQ5JX69 171 aa17.14■□□□□ 0.33
CIRBP-208ENST00000586548 PRR27Q6MZM9 219 aa17.14■□□□□ 0.33
CIRBP-208ENST00000586548 TMEM183AQ8IXX5 376 aa17.14■□□□□ 0.33
CIRBP-208ENST00000586548 NUDT10Q8NFP7 164 aa17.14■□□□□ 0.33
CIRBP-208ENST00000586548 NUDT11Q96G61 164 aa17.14■□□□□ 0.33
CIRBP-208ENST00000586548 SERTAD4Q9NUC0 356 aa17.14■□□□□ 0.33
CIRBP-208ENST00000586548 ZNF492Q9P255 531 aa17.14■□□□□ 0.33
CIRBP-208ENST00000586548 M0R3E3 92 aa17.13■□□□□ 0.33
CIRBP-208ENST00000586548 PSG3Q16557 428 aa17.13■□□□□ 0.33
CIRBP-208ENST00000586548 SMIM27A0A1W2PRY6 76 aa17.13■□□□□ 0.33
CIRBP-208ENST00000586548 LCNL1Q6ZST4 164 aa17.13■□□□□ 0.33
CIRBP-208ENST00000586548 PRNTQ86SH4 94 aa17.13■□□□□ 0.33
CIRBP-208ENST00000586548 ZNF702PQ9H963 129 aa17.13■□□□□ 0.33
CIRBP-208ENST00000586548 ZNF331Q9NQX6 463 aaPredicted RBP17.13■□□□□ 0.33
CIRBP-208ENST00000586548 ZNF785A8K8V0 405 aa17.12■□□□□ 0.33
CIRBP-208ENST00000586548 ZNF207O43670 478 aaKnown RBP17.12■□□□□ 0.33
CIRBP-208ENST00000586548 GRAMD2BQ96HH9 432 aa17.12■□□□□ 0.33
CIRBP-208ENST00000586548 ZFP30Q9Y2G7 519 aa17.12■□□□□ 0.33
CIRBP-208ENST00000586548 APOHP02749 345 aaPredicted RBP17.11■□□□□ 0.33
CIRBP-208ENST00000586548 MEOX2P50222 304 aa17.11■□□□□ 0.33
CIRBP-208ENST00000586548 RPL19P84098 196 aaKnown RBP17.11■□□□□ 0.33
CIRBP-208ENST00000586548 FABP9Q0Z7S8 132 aa17.11■□□□□ 0.33
CIRBP-208ENST00000586548 PSG8Q9UQ74 426 aa17.11■□□□□ 0.33
CIRBP-208ENST00000586548 IGHV3-66A0A0C4DH42 116 aa17.1■□□□□ 0.33
CIRBP-208ENST00000586548 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa17.1■□□□□ 0.33
CIRBP-208ENST00000586548 SIGLECL1Q8N7X8 197 aa17.1■□□□□ 0.33
CIRBP-208ENST00000586548 SLC50A1Q9BRV3 221 aa17.1■□□□□ 0.33
CIRBP-208ENST00000586548 NDUFA6P56556 154 aa17.1■□□□□ 0.33
CIRBP-208ENST00000586548 C16orf54Q6UWD8 224 aa17.1■□□□□ 0.33
CIRBP-208ENST00000586548 ITPR3Q14573 2671 aa17.09■□□□□ 0.33
CIRBP-208ENST00000586548 IGHV3OR16-13A0A075B7E8 117 aa17.09■□□□□ 0.33
CIRBP-208ENST00000586548 IGHV3-74A0A0B4J1X5 117 aa17.09■□□□□ 0.33
CIRBP-208ENST00000586548 C19orf71A6NCJ1 209 aa17.09■□□□□ 0.33
CIRBP-208ENST00000586548 FBLL1A6NHQ2 334 aaKnown RBP17.09■□□□□ 0.33
CIRBP-208ENST00000586548 SLC35B1P78383 322 aa17.09■□□□□ 0.33
CIRBP-208ENST00000586548 UNQ9165/PRO28630Q6UXU0 137 aa17.09■□□□□ 0.33
CIRBP-208ENST00000586548 TMEM86BQ8N661 226 aa17.09■□□□□ 0.33
CIRBP-208ENST00000586548 HECTD1Q9ULT8 2610 aa17.09■□□□□ 0.33
CIRBP-208ENST00000586548 CT83Q5H943 113 aa17.08■□□□□ 0.32
CIRBP-208ENST00000586548 LINC00322Q6ZN03 302 aaPredicted RBP17.08■□□□□ 0.32
CIRBP-208ENST00000586548 PEF1Q9UBV8 284 aaKnown RBP17.08■□□□□ 0.32
CIRBP-208ENST00000586548 TRAPPC1Q9Y5R8 145 aa17.08■□□□□ 0.32
CIRBP-208ENST00000586548 TEX15Q9BXT5 2789 aa17.08■□□□□ 0.32
CIRBP-208ENST00000586548 IGHV3-49A0A0A0MS15 119 aa17.07■□□□□ 0.32
CIRBP-208ENST00000586548 CHEK1O14757 476 aa17.07■□□□□ 0.32
CIRBP-208ENST00000586548 CA1P00915 261 aaPredicted RBP17.07■□□□□ 0.32
CIRBP-208ENST00000586548 TCL1AP56279 114 aa17.07■□□□□ 0.32
CIRBP-208ENST00000586548 IL17RELQ6ZVW7 336 aa17.07■□□□□ 0.32
CIRBP-208ENST00000586548 GLMPQ8WWB7 406 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms