RNA–Protein interactions for RNA: ENST00000584888.1

ERBB2-221, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 500 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-221ENST00000584888 EBLN2Q6P2I7 272 aa12.86□□□□□ -0.35
ERBB2-221ENST00000584888 C2CD4CQ8TF44 421 aa12.86□□□□□ -0.35
ERBB2-221ENST00000584888 ZNF705FA8MVS1 300 aaPredicted RBP12.85□□□□□ -0.35
ERBB2-221ENST00000584888 COX7A2P2O60397 106 aa12.85□□□□□ -0.35
ERBB2-221ENST00000584888 ZNF705DP0CH99 300 aaPredicted RBP12.85□□□□□ -0.35
ERBB2-221ENST00000584888 ZNF705BP0CI00 300 aaPredicted RBP12.85□□□□□ -0.35
ERBB2-221ENST00000584888 CXCL3P19876 107 aa12.85□□□□□ -0.35
ERBB2-221ENST00000584888 C10orf113Q5VZT2 155 aa12.85□□□□□ -0.35
ERBB2-221ENST00000584888 RNF182Q8N6D2 247 aa12.85□□□□□ -0.35
ERBB2-221ENST00000584888 OR4B1Q8NGF8 309 aa12.85□□□□□ -0.35
ERBB2-221ENST00000584888 PPP1R1CQ8WVI7 109 aa12.85□□□□□ -0.35
ERBB2-221ENST00000584888 NEU1Q99519 415 aa12.85□□□□□ -0.35
ERBB2-221ENST00000584888 SLC25A31Q9H0C2 315 aa12.85□□□□□ -0.35
ERBB2-221ENST00000584888 SLC35B3Q9H1N7 401 aa12.85□□□□□ -0.35
ERBB2-221ENST00000584888 HRH4Q9H3N8 390 aa12.85□□□□□ -0.35
ERBB2-221ENST00000584888 UBE2L5PA0A1B0GUS4 154 aa12.84□□□□□ -0.35
ERBB2-221ENST00000584888 MPDU1O75352 247 aa12.84□□□□□ -0.35
ERBB2-221ENST00000584888 FXYD7P58549 80 aa12.84□□□□□ -0.35
ERBB2-221ENST00000584888 FGL1Q08830 312 aa12.84□□□□□ -0.35
ERBB2-221ENST00000584888 Q6ZRG5 221 aa12.84□□□□□ -0.35
ERBB2-221ENST00000584888 SLC39A9Q9NUM3 307 aa12.84□□□□□ -0.35
ERBB2-221ENST00000584888 SSNA1O43805 119 aa12.83□□□□□ -0.36
ERBB2-221ENST00000584888 CXCL2P19875 107 aa12.83□□□□□ -0.36
ERBB2-221ENST00000584888 FGF7P21781 194 aa12.83□□□□□ -0.36
ERBB2-221ENST00000584888 HLA-DMBP28068 263 aa12.83□□□□□ -0.36
ERBB2-221ENST00000584888 TCTAP57738 103 aa12.83□□□□□ -0.36
ERBB2-221ENST00000584888 BAXQ07812 192 aa12.83□□□□□ -0.36
ERBB2-221ENST00000584888 PSG3Q16557 428 aa12.83□□□□□ -0.36
ERBB2-221ENST00000584888 LRRC37A5PQ49AS3 106 aa12.83□□□□□ -0.36
ERBB2-221ENST00000584888 BPIFA4PQ86YQ2 179 aa12.83□□□□□ -0.36
ERBB2-221ENST00000584888 OR5C1Q8NGR4 320 aa12.83□□□□□ -0.36
ERBB2-221ENST00000584888 OR1L4Q8NGR5 311 aa12.83□□□□□ -0.36
ERBB2-221ENST00000584888 DUSP14O95147 198 aaKnown RBP12.82□□□□□ -0.36
ERBB2-221ENST00000584888 MPC2O95563 127 aa12.82□□□□□ -0.36
ERBB2-221ENST00000584888 IGLC2P0DOY2 106 aa12.82□□□□□ -0.36
ERBB2-221ENST00000584888 B2MP61769 119 aa12.82□□□□□ -0.36
ERBB2-221ENST00000584888 C1orf158Q8N1D5 194 aa12.82□□□□□ -0.36
ERBB2-221ENST00000584888 SAT2Q96F10 170 aaPredicted RBP12.82□□□□□ -0.36
ERBB2-221ENST00000584888 PFDN5Q99471 154 aa12.82□□□□□ -0.36
ERBB2-221ENST00000584888 ZNF331Q9NQX6 463 aaPredicted RBP12.82□□□□□ -0.36
ERBB2-221ENST00000584888 PXMP4Q9Y6I8 212 aa12.82□□□□□ -0.36
ERBB2-221ENST00000584888 KMT2AQ03164 3969 aa12.81□□□□□ -0.36
ERBB2-221ENST00000584888 TRAV5A0A0B4J249 113 aa12.81□□□□□ -0.36
ERBB2-221ENST00000584888 SMIM9A6NGZ8 99 aa12.81□□□□□ -0.36
ERBB2-221ENST00000584888 IGLL5B9A064 214 aa12.81□□□□□ -0.36
ERBB2-221ENST00000584888 C11orf94C9JXX5 98 aa12.81□□□□□ -0.36
ERBB2-221ENST00000584888 H3BQ15 152 aa12.81□□□□□ -0.36
ERBB2-221ENST00000584888 PTTG1O95997 202 aa12.81□□□□□ -0.36
ERBB2-221ENST00000584888 CNN1P51911 297 aaKnown RBP12.81□□□□□ -0.36
ERBB2-221ENST00000584888 LCN15Q6UWW0 184 aa12.81□□□□□ -0.36
ERBB2-221ENST00000584888 OR11H7Q8NGC8 314 aa12.81□□□□□ -0.36
ERBB2-221ENST00000584888 NPCDR1Q9BY65 106 aa12.81□□□□□ -0.36
ERBB2-221ENST00000584888 APLNQ9ULZ1 77 aa12.81□□□□□ -0.36
ERBB2-221ENST00000584888 ALG5Q9Y673 324 aa12.81□□□□□ -0.36
ERBB2-221ENST00000584888 ZNF738Q8NE65 137 aa12.8□□□□□ -0.36
ERBB2-221ENST00000584888 OR8A1Q8NGG7 326 aa12.8□□□□□ -0.36
ERBB2-221ENST00000584888 SLC50A1Q9BRV3 221 aa12.8□□□□□ -0.36
ERBB2-221ENST00000584888 SLC17A3O00476 420 aa12.79□□□□□ -0.36
ERBB2-221ENST00000584888 CRXO43186 299 aaPredicted RBP12.79□□□□□ -0.36
ERBB2-221ENST00000584888 SNRPCP09234 159 aaKnown RBP12.79□□□□□ -0.36
ERBB2-221ENST00000584888 LRRC20Q8TCA0 184 aa12.79□□□□□ -0.36
ERBB2-221ENST00000584888 IGF2BP2-AS1Q96M15 143 aa12.79□□□□□ -0.36
ERBB2-221ENST00000584888 WDR61Q9GZS3 305 aaKnown RBP12.79□□□□□ -0.36
ERBB2-221ENST00000584888 CELA1Q9UNI1 258 aa12.79□□□□□ -0.36
ERBB2-221ENST00000584888 AMBPP02760 352 aa12.78□□□□□ -0.36
ERBB2-221ENST00000584888 CLINT1Q14677 625 aa12.78□□□□□ -0.36
ERBB2-221ENST00000584888 GCSAMLQ5JQS6 135 aa12.78□□□□□ -0.36
ERBB2-221ENST00000584888 Q6ZTC4 211 aa12.78□□□□□ -0.36
ERBB2-221ENST00000584888 THAP6Q8TBB0 222 aa12.78□□□□□ -0.36
ERBB2-221ENST00000584888 TMEM14CQ9P0S9 112 aa12.78□□□□□ -0.36
ERBB2-221ENST00000584888 HSPB11Q9Y547 144 aa12.78□□□□□ -0.36
ERBB2-221ENST00000584888 TRAV10A0A0B4J240 114 aa12.77□□□□□ -0.37
ERBB2-221ENST00000584888 H3BTX0 84 aa12.77□□□□□ -0.37
ERBB2-221ENST00000584888 GUK1Q16774 197 aa12.77□□□□□ -0.37
ERBB2-221ENST00000584888 C12orf74Q32Q52 190 aa12.77□□□□□ -0.37
ERBB2-221ENST00000584888 RPUSD4Q96CM3 377 aaKnown RBP12.77□□□□□ -0.37
ERBB2-221ENST00000584888 ZNF586Q9NXT0 402 aa12.77□□□□□ -0.37
ERBB2-221ENST00000584888 GOLT1BQ9Y3E0 138 aa12.77□□□□□ -0.37
ERBB2-221ENST00000584888 ZNF253O75346 499 aa12.76□□□□□ -0.37
ERBB2-221ENST00000584888 PET100P0DJ07 73 aa12.76□□□□□ -0.37
ERBB2-221ENST00000584888 RPL12P30050 165 aaKnown RBP12.76□□□□□ -0.37
ERBB2-221ENST00000584888 SPINK13Q1W4C9 94 aa12.76□□□□□ -0.37
ERBB2-221ENST00000584888 FAM167A-AS1Q96KT0 104 aa12.76□□□□□ -0.37
ERBB2-221ENST00000584888 ATP5SQ99766 215 aa12.76□□□□□ -0.37
ERBB2-221ENST00000584888 MBD2Q9UBB5 411 aa12.76□□□□□ -0.37
ERBB2-221ENST00000584888 RFNGQ9Y644 331 aa12.76□□□□□ -0.37
ERBB2-221ENST00000584888 IGHV3OR16-12A0A075B7B8 117 aa12.75□□□□□ -0.37
ERBB2-221ENST00000584888 TMEM189A5PLL7 270 aa12.75□□□□□ -0.37
ERBB2-221ENST00000584888 PRAC2D3DTV9 90 aa12.75□□□□□ -0.37
ERBB2-221ENST00000584888 M0R2Z0 102 aa12.75□□□□□ -0.37
ERBB2-221ENST00000584888 HIST1H1AQ02539 215 aaPredicted RBP12.75□□□□□ -0.37
ERBB2-221ENST00000584888 VPS13DQ5THJ4 4388 aa12.75□□□□□ -0.37
ERBB2-221ENST00000584888 FRAS1Q86XX4 4008 aa12.75□□□□□ -0.37
ERBB2-221ENST00000584888 TRBV19A0A075B6N1 114 aa12.74□□□□□ -0.37
ERBB2-221ENST00000584888 IGHV4-4A0A075B6R2 117 aa12.74□□□□□ -0.37
ERBB2-221ENST00000584888 BOLA2-SMG1P6H3BVE0 249 aa12.74□□□□□ -0.37
ERBB2-221ENST00000584888 NDUFB4O95168 129 aa12.74□□□□□ -0.37
ERBB2-221ENST00000584888 PRB4P10163 310 aaPredicted RBP12.74□□□□□ -0.37
ERBB2-221ENST00000584888 HIST1H1EP10412 219 aaKnown RBP12.74□□□□□ -0.37
ERBB2-221ENST00000584888 FCN2Q15485 313 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 200.4 ms