RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 ZNF705DP0CH99 300 aaPredicted RBP4.77□□□□□ -1.65
TRAF4-213ENST00000578917 ZNF705BP0CI00 300 aaPredicted RBP4.77□□□□□ -1.65
TRAF4-213ENST00000578917 CXCL3P19876 107 aa4.77□□□□□ -1.65
TRAF4-213ENST00000578917 C4BPBP20851 252 aa4.77□□□□□ -1.65
TRAF4-213ENST00000578917 CNN1P51911 297 aaKnown RBP4.77□□□□□ -1.65
TRAF4-213ENST00000578917 NANOS2P60321 138 aaKnown RBP4.77□□□□□ -1.65
TRAF4-213ENST00000578917 PRR20EP86478 221 aa4.77□□□□□ -1.65
TRAF4-213ENST00000578917 PRR20CP86479 221 aa4.77□□□□□ -1.65
TRAF4-213ENST00000578917 PRR20DP86480 221 aa4.77□□□□□ -1.65
TRAF4-213ENST00000578917 PRR20BP86481 221 aa4.77□□□□□ -1.65
TRAF4-213ENST00000578917 PRR20AP86496 221 aa4.77□□□□□ -1.65
TRAF4-213ENST00000578917 OPCMLQ14982 345 aa4.77□□□□□ -1.65
TRAF4-213ENST00000578917 PSG3Q16557 428 aa4.77□□□□□ -1.65
TRAF4-213ENST00000578917 GUK1Q16774 197 aa4.77□□□□□ -1.65
TRAF4-213ENST00000578917 CEMP1Q6PRD7 247 aaPredicted RBP4.77□□□□□ -1.65
TRAF4-213ENST00000578917 LCN15Q6UWW0 184 aa4.77□□□□□ -1.65
TRAF4-213ENST00000578917 OR10J6PQ8NGY7 276 aa4.77□□□□□ -1.65
TRAF4-213ENST00000578917 PHLDA1Q8WV24 401 aaPredicted RBP4.77□□□□□ -1.65
TRAF4-213ENST00000578917 BLNKQ8WV28 456 aa4.77□□□□□ -1.65
TRAF4-213ENST00000578917 RPUSD4Q96CM3 377 aaKnown RBP4.77□□□□□ -1.65
TRAF4-213ENST00000578917 C17orf77Q96MU5 243 aa4.77□□□□□ -1.65
TRAF4-213ENST00000578917 ATP5SQ99766 215 aa4.77□□□□□ -1.65
TRAF4-213ENST00000578917 SLC50A1Q9BRV3 221 aa4.77□□□□□ -1.65
TRAF4-213ENST00000578917 RNF126Q9BV68 326 aa4.77□□□□□ -1.65
TRAF4-213ENST00000578917 NPCDR1Q9BY65 106 aa4.77□□□□□ -1.65
TRAF4-213ENST00000578917 SLC35B3Q9H1N7 401 aa4.77□□□□□ -1.65
TRAF4-213ENST00000578917 HRH4Q9H3N8 390 aa4.77□□□□□ -1.65
TRAF4-213ENST00000578917 MBD2Q9UBB5 411 aa4.77□□□□□ -1.65
TRAF4-213ENST00000578917 A0A087X0K7 114 aa4.76□□□□□ -1.65
TRAF4-213ENST00000578917 TRAV8-2A0A0B4J237 113 aa4.76□□□□□ -1.65
TRAF4-213ENST00000578917 ZNF705FA8MVS1 300 aaPredicted RBP4.76□□□□□ -1.65
TRAF4-213ENST00000578917 HBE1P02100 147 aa4.76□□□□□ -1.65
TRAF4-213ENST00000578917 AMBPP02760 352 aa4.76□□□□□ -1.65
TRAF4-213ENST00000578917 PRB4P10163 310 aaPredicted RBP4.76□□□□□ -1.65
TRAF4-213ENST00000578917 HTN1P15515 57 aa4.76□□□□□ -1.65
TRAF4-213ENST00000578917 CXCL2P19875 107 aa4.76□□□□□ -1.65
TRAF4-213ENST00000578917 FCN2Q15485 313 aa4.76□□□□□ -1.65
TRAF4-213ENST00000578917 SPINK13Q1W4C9 94 aa4.76□□□□□ -1.65
TRAF4-213ENST00000578917 INO80EQ8NBZ0 244 aaPredicted RBP4.76□□□□□ -1.65
TRAF4-213ENST00000578917 CSNK1G2-AS1Q8NCQ2 148 aa4.76□□□□□ -1.65
TRAF4-213ENST00000578917 CHAC2Q8WUX2 184 aa4.76□□□□□ -1.65
TRAF4-213ENST00000578917 CLUHP3Q96NS8 147 aa4.76□□□□□ -1.65
TRAF4-213ENST00000578917 WDR61Q9GZS3 305 aaKnown RBP4.76□□□□□ -1.65
TRAF4-213ENST00000578917 C11orf68Q9H3H3 251 aaKnown RBP4.76□□□□□ -1.65
TRAF4-213ENST00000578917 AAMDCQ9H7C9 122 aa4.76□□□□□ -1.65
TRAF4-213ENST00000578917 HSPB11Q9Y547 144 aa4.76□□□□□ -1.65
TRAF4-213ENST00000578917 LCE6AA0A183 80 aa4.75□□□□□ -1.65
TRAF4-213ENST00000578917 A0A1W2PPV4 95 aa4.75□□□□□ -1.65
TRAF4-213ENST00000578917 TMEM189A5PLL7 270 aa4.75□□□□□ -1.65
TRAF4-213ENST00000578917 SMIM9A6NGZ8 99 aa4.75□□□□□ -1.65
TRAF4-213ENST00000578917 ZNF705EA8MWA4 302 aaPredicted RBP4.75□□□□□ -1.65
TRAF4-213ENST00000578917 H3BQ15 152 aa4.75□□□□□ -1.65
TRAF4-213ENST00000578917 M0R2Z0 102 aa4.75□□□□□ -1.65
TRAF4-213ENST00000578917 LY6G6CO95867 125 aa4.75□□□□□ -1.65
TRAF4-213ENST00000578917 INSP01308 110 aa4.75□□□□□ -1.65
TRAF4-213ENST00000578917 SPART-AS1P0CW21 52 aa4.75□□□□□ -1.65
TRAF4-213ENST00000578917 RBMY1A1P0DJD3 496 aaKnown RBP4.75□□□□□ -1.65
TRAF4-213ENST00000578917 RBMY1CP0DJD4 496 aa4.75□□□□□ -1.65
TRAF4-213ENST00000578917 HLA-DMBP28068 263 aa4.75□□□□□ -1.65
TRAF4-213ENST00000578917 TSPOP30536 169 aa4.75□□□□□ -1.65
TRAF4-213ENST00000578917 RBMY1FQ15415 496 aaKnown RBP4.75□□□□□ -1.65
TRAF4-213ENST00000578917 RRN3P1Q2M238 152 aa4.75□□□□□ -1.65
TRAF4-213ENST00000578917 GCSAMLQ5JQS6 135 aa4.75□□□□□ -1.65
TRAF4-213ENST00000578917 FFAR4Q5NUL3 377 aa4.75□□□□□ -1.65
TRAF4-213ENST00000578917 MORN5Q5VZ52 161 aa4.75□□□□□ -1.65
TRAF4-213ENST00000578917 Q8NAQ8 132 aa4.75□□□□□ -1.65
TRAF4-213ENST00000578917 OR8A1Q8NGG7 326 aa4.75□□□□□ -1.65
TRAF4-213ENST00000578917 C2CD4CQ8TF44 421 aa4.75□□□□□ -1.65
TRAF4-213ENST00000578917 IGF2BP2-AS1Q96M15 143 aa4.75□□□□□ -1.65
TRAF4-213ENST00000578917 LINC01587Q99440 93 aa4.75□□□□□ -1.65
TRAF4-213ENST00000578917 ZNF331Q9NQX6 463 aaPredicted RBP4.75□□□□□ -1.65
TRAF4-213ENST00000578917 RFNGQ9Y644 331 aa4.75□□□□□ -1.65
TRAF4-213ENST00000578917 X6R8D5 127 aa4.75□□□□□ -1.65
TRAF4-213ENST00000578917 HUWE1Q7Z6Z7 4374 aaKnown RBP4.74□□□□□ -1.65
TRAF4-213ENST00000578917 TRBV19A0A075B6N1 114 aa4.74□□□□□ -1.65
TRAF4-213ENST00000578917 TRAV12-2A0A075B6T6 113 aa4.74□□□□□ -1.65
TRAF4-213ENST00000578917 LOC102723971A0A1B0GUV8 181 aa4.74□□□□□ -1.65
TRAF4-213ENST00000578917 IGLL5B9A064 214 aa4.74□□□□□ -1.65
TRAF4-213ENST00000578917 C11orf94C9JXX5 98 aa4.74□□□□□ -1.65
TRAF4-213ENST00000578917 BOLA2-SMG1P6H3BVE0 249 aa4.74□□□□□ -1.65
TRAF4-213ENST00000578917 SLC17A3O00476 420 aa4.74□□□□□ -1.65
TRAF4-213ENST00000578917 MRPS12O15235 138 aaKnown RBP4.74□□□□□ -1.65
TRAF4-213ENST00000578917 OR7C2O60412 319 aa4.74□□□□□ -1.65
TRAF4-213ENST00000578917 GIPP09681 153 aaPredicted RBP4.74□□□□□ -1.65
TRAF4-213ENST00000578917 OR10J4P0C629 311 aa4.74□□□□□ -1.65
TRAF4-213ENST00000578917 NBEAP1P0C6P0 100 aa4.74□□□□□ -1.65
TRAF4-213ENST00000578917 IGLC2P0DOY2 106 aa4.74□□□□□ -1.65
TRAF4-213ENST00000578917 PYYP10082 97 aa4.74□□□□□ -1.65
TRAF4-213ENST00000578917 HIST1H1EP10412 219 aaKnown RBP4.74□□□□□ -1.65
TRAF4-213ENST00000578917 TAS2R45P59539 299 aa4.74□□□□□ -1.65
TRAF4-213ENST00000578917 MIR17HGQ75NE6 70 aa4.74□□□□□ -1.65
TRAF4-213ENST00000578917 OR11H7Q8NGC8 314 aa4.74□□□□□ -1.65
TRAF4-213ENST00000578917 RNF141Q8WVD5 230 aa4.74□□□□□ -1.65
TRAF4-213ENST00000578917 PAXXQ9BUH6 204 aa4.74□□□□□ -1.65
TRAF4-213ENST00000578917 OR51M1Q9H341 326 aa4.74□□□□□ -1.65
TRAF4-213ENST00000578917 ZNF586Q9NXT0 402 aa4.74□□□□□ -1.65
TRAF4-213ENST00000578917 TMEM14CQ9P0S9 112 aa4.74□□□□□ -1.65
TRAF4-213ENST00000578917 FUT9Q9Y231 359 aa4.74□□□□□ -1.65
TRAF4-213ENST00000578917 FXYD6-FXYD2A0A087WZ82 144 aa4.73□□□□□ -1.65
TRAF4-213ENST00000578917 DEFB131BA0A096LNP1 70 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms