RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 RFNGQ9Y644 331 aa6.25□□□□□ -1.41
SMG6-216ENST00000575176 PXMP4Q9Y6I8 212 aa6.25□□□□□ -1.41
SMG6-216ENST00000575176 DEFB4AO15263 64 aa6.24□□□□□ -1.41
SMG6-216ENST00000575176 NDUFB4O95168 129 aa6.24□□□□□ -1.41
SMG6-216ENST00000575176 OR5G3P0C626 314 aa6.24□□□□□ -1.41
SMG6-216ENST00000575176 RPL7P18124 248 aaKnown RBP6.24□□□□□ -1.41
SMG6-216ENST00000575176 CXCL2P19875 107 aa6.24□□□□□ -1.41
SMG6-216ENST00000575176 PVALBP20472 110 aaPredicted RBP6.24□□□□□ -1.41
SMG6-216ENST00000575176 FGF7P21781 194 aa6.24□□□□□ -1.41
SMG6-216ENST00000575176 B2MP61769 119 aa6.24□□□□□ -1.41
SMG6-216ENST00000575176 TMEM41BQ5BJD5 291 aa6.24□□□□□ -1.41
SMG6-216ENST00000575176 FAM78BQ5VT40 261 aa6.24□□□□□ -1.41
SMG6-216ENST00000575176 STX12Q86Y82 276 aa6.24□□□□□ -1.41
SMG6-216ENST00000575176 C1orf158Q8N1D5 194 aa6.24□□□□□ -1.41
SMG6-216ENST00000575176 ZNF503Q96F45 646 aa6.24□□□□□ -1.41
SMG6-216ENST00000575176 RARRES2Q99969 163 aa6.24□□□□□ -1.41
SMG6-216ENST00000575176 SLC25A2Q9BXI2 301 aa6.24□□□□□ -1.41
SMG6-216ENST00000575176 WDR61Q9GZS3 305 aaKnown RBP6.24□□□□□ -1.41
SMG6-216ENST00000575176 PLAC8L1A1L4L8 177 aa6.23□□□□□ -1.41
SMG6-216ENST00000575176 RNF222A6NCQ9 220 aa6.23□□□□□ -1.41
SMG6-216ENST00000575176 PRAC2D3DTV9 90 aa6.23□□□□□ -1.41
SMG6-216ENST00000575176 H3BTX0 84 aa6.23□□□□□ -1.41
SMG6-216ENST00000575176 SSNA1O43805 119 aa6.23□□□□□ -1.41
SMG6-216ENST00000575176 MPDU1O75352 247 aa6.23□□□□□ -1.41
SMG6-216ENST00000575176 SNRPCP09234 159 aaKnown RBP6.23□□□□□ -1.41
SMG6-216ENST00000575176 CNN1P51911 297 aaKnown RBP6.23□□□□□ -1.41
SMG6-216ENST00000575176 RAP2BP61225 183 aa6.23□□□□□ -1.41
SMG6-216ENST00000575176 HBG1P69891 147 aa6.23□□□□□ -1.41
SMG6-216ENST00000575176 HBG2P69892 147 aa6.23□□□□□ -1.41
SMG6-216ENST00000575176 CLINT1Q14677 625 aa6.23□□□□□ -1.41
SMG6-216ENST00000575176 ATP6V1FQ16864 119 aa6.23□□□□□ -1.41
SMG6-216ENST00000575176 SAMD13Q5VXD3 122 aa6.23□□□□□ -1.41
SMG6-216ENST00000575176 PPP1R14BQ96C90 147 aa6.23□□□□□ -1.41
SMG6-216ENST00000575176 LINC00052Q96N35 136 aa6.23□□□□□ -1.41
SMG6-216ENST00000575176 NEU1Q99519 415 aa6.23□□□□□ -1.41
SMG6-216ENST00000575176 ZNF586Q9NXT0 402 aa6.23□□□□□ -1.41
SMG6-216ENST00000575176 XCL2Q9UBD3 114 aa6.23□□□□□ -1.41
SMG6-216ENST00000575176 PFDN2Q9UHV9 154 aa6.23□□□□□ -1.41
SMG6-216ENST00000575176 PKD1P98161 4303 aa6.23□□□□□ -1.41
SMG6-216ENST00000575176 COX7A2P2O60397 106 aa6.22□□□□□ -1.41
SMG6-216ENST00000575176 IGKV3-20P01619 116 aa6.22□□□□□ -1.41
SMG6-216ENST00000575176 PYYP10082 97 aa6.22□□□□□ -1.41
SMG6-216ENST00000575176 MIFP14174 115 aa6.22□□□□□ -1.41
SMG6-216ENST00000575176 FXYD7P58549 80 aa6.22□□□□□ -1.41
SMG6-216ENST00000575176 NANOS2P60321 138 aaKnown RBP6.22□□□□□ -1.41
SMG6-216ENST00000575176 CYCSP99999 105 aaKnown RBP6.22□□□□□ -1.41
SMG6-216ENST00000575176 KIR3DS1Q14943 382 aa6.22□□□□□ -1.41
SMG6-216ENST00000575176 C10orf113Q5VZT2 155 aa6.22□□□□□ -1.41
SMG6-216ENST00000575176 LCN15Q6UWW0 184 aa6.22□□□□□ -1.41
SMG6-216ENST00000575176 OR8A1Q8NGG7 326 aa6.22□□□□□ -1.41
SMG6-216ENST00000575176 C16orf92Q96LL3 132 aa6.22□□□□□ -1.41
SMG6-216ENST00000575176 ATP5SQ99766 215 aa6.22□□□□□ -1.41
SMG6-216ENST00000575176 PARD6GQ9BYG4 376 aaPredicted RBP6.22□□□□□ -1.41
SMG6-216ENST00000575176 HRH4Q9H3N8 390 aa6.22□□□□□ -1.41
SMG6-216ENST00000575176 DNAJC4Q9NNZ3 241 aa6.22□□□□□ -1.41
SMG6-216ENST00000575176 RPRMQ9NS64 109 aa6.22□□□□□ -1.41
SMG6-216ENST00000575176 TMEM14CQ9P0S9 112 aa6.22□□□□□ -1.41
SMG6-216ENST00000575176 TRBV19A0A075B6N1 114 aa6.21□□□□□ -1.42
SMG6-216ENST00000575176 M0R2Z0 102 aa6.21□□□□□ -1.42
SMG6-216ENST00000575176 ZNF253O75346 499 aa6.21□□□□□ -1.42
SMG6-216ENST00000575176 RPL12P30050 165 aaKnown RBP6.21□□□□□ -1.42
SMG6-216ENST00000575176 ID1P41134 155 aa6.21□□□□□ -1.42
SMG6-216ENST00000575176 PSG9Q00887 426 aa6.21□□□□□ -1.42
SMG6-216ENST00000575176 PMS2P11Q13670 270 aa6.21□□□□□ -1.42
SMG6-216ENST00000575176 PSG3Q16557 428 aa6.21□□□□□ -1.42
SMG6-216ENST00000575176 MIR17HGQ75NE6 70 aa6.21□□□□□ -1.42
SMG6-216ENST00000575176 BPIFA4PQ86YQ2 179 aa6.21□□□□□ -1.42
SMG6-216ENST00000575176 BAP18Q8IXM2 172 aa6.21□□□□□ -1.42
SMG6-216ENST00000575176 LINC00476Q8WZB0 136 aa6.21□□□□□ -1.42
SMG6-216ENST00000575176 FXYD5Q96DB9 178 aa6.21□□□□□ -1.42
SMG6-216ENST00000575176 FAM19A4Q96LR4 140 aa6.21□□□□□ -1.42
SMG6-216ENST00000575176 AQP10Q96PS8 301 aa6.21□□□□□ -1.42
SMG6-216ENST00000575176 PFDN5Q99471 154 aa6.21□□□□□ -1.42
SMG6-216ENST00000575176 SLC50A1Q9BRV3 221 aa6.21□□□□□ -1.42
SMG6-216ENST00000575176 SLC25A31Q9H0C2 315 aa6.21□□□□□ -1.42
SMG6-216ENST00000575176 PKHD1P08F94 4074 aa6.21□□□□□ -1.42
SMG6-216ENST00000575176 DNAH11Q96DT5 4516 aa6.21□□□□□ -1.42
SMG6-216ENST00000575176 NACAE9PAV3 2078 aa6.21□□□□□ -1.42
SMG6-216ENST00000575176 M0R3E3 92 aa6.2□□□□□ -1.42
SMG6-216ENST00000575176 PRM2P04554 102 aa6.2□□□□□ -1.42
SMG6-216ENST00000575176 GIPP09681 153 aaPredicted RBP6.2□□□□□ -1.42
SMG6-216ENST00000575176 SPINK13Q1W4C9 94 aa6.2□□□□□ -1.42
SMG6-216ENST00000575176 C12orf74Q32Q52 190 aa6.2□□□□□ -1.42
SMG6-216ENST00000575176 CEMP1Q6PRD7 247 aaPredicted RBP6.2□□□□□ -1.42
SMG6-216ENST00000575176 Q6ZTC4 211 aa6.2□□□□□ -1.42
SMG6-216ENST00000575176 OR4B1Q8NGF8 309 aa6.2□□□□□ -1.42
SMG6-216ENST00000575176 OR1L4Q8NGR5 311 aa6.2□□□□□ -1.42
SMG6-216ENST00000575176 IGF2BP2-AS1Q96M15 143 aa6.2□□□□□ -1.42
SMG6-216ENST00000575176 MFFQ9GZY8 342 aa6.2□□□□□ -1.42
SMG6-216ENST00000575176 NUPR2A6NF83 97 aa6.19□□□□□ -1.42
SMG6-216ENST00000575176 NPIPB6E9PJ23 425 aa6.19□□□□□ -1.42
SMG6-216ENST00000575176 BOLA2-SMG1P6H3BVE0 249 aa6.19□□□□□ -1.42
SMG6-216ENST00000575176 EIF3GO75821 320 aaKnown RBP eCLIP6.19□□□□□ -1.42
SMG6-216ENST00000575176 PET100P0DJ07 73 aa6.19□□□□□ -1.42
SMG6-216ENST00000575176 FGL1Q08830 312 aa6.19□□□□□ -1.42
SMG6-216ENST00000575176 RGS21Q2M5E4 152 aa6.19□□□□□ -1.42
SMG6-216ENST00000575176 ZNF738Q8NE65 137 aa6.19□□□□□ -1.42
SMG6-216ENST00000575176 PHLDA1Q8WV24 401 aaPredicted RBP6.19□□□□□ -1.42
SMG6-216ENST00000575176 RPUSD4Q96CM3 377 aaKnown RBP6.19□□□□□ -1.42
SMG6-216ENST00000575176 PHYHIPLQ96FC7 376 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms