RNA–Protein interactions for RNA: ENST00000572205.5

SMG6-210, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-210ENST00000572205 DEFA3P59666 94 aa6.27□□□□□ -1.41
SMG6-210ENST00000572205 RBMY1FQ15415 496 aaKnown RBP6.27□□□□□ -1.41
SMG6-210ENST00000572205 GCSAMLQ5JQS6 135 aa6.27□□□□□ -1.41
SMG6-210ENST00000572205 MIC13Q5XKP0 118 aa6.27□□□□□ -1.41
SMG6-210ENST00000572205 IGFL4Q6B9Z1 124 aa6.27□□□□□ -1.41
SMG6-210ENST00000572205 ZNF705AQ6ZN79 300 aaPredicted RBP6.27□□□□□ -1.41
SMG6-210ENST00000572205 FOXI2Q6ZQN5 318 aa6.27□□□□□ -1.41
SMG6-210ENST00000572205 CCDC28AQ8IWP9 274 aa6.27□□□□□ -1.41
SMG6-210ENST00000572205 OR8I2Q8N0Y5 310 aa6.27□□□□□ -1.41
SMG6-210ENST00000572205 RNF182Q8N6D2 247 aa6.27□□□□□ -1.41
SMG6-210ENST00000572205 TMEM147Q9BVK8 224 aa6.27□□□□□ -1.41
SMG6-210ENST00000572205 NPCDR1Q9BY65 106 aa6.27□□□□□ -1.41
SMG6-210ENST00000572205 ARL6Q9H0F7 186 aa6.27□□□□□ -1.41
SMG6-210ENST00000572205 SLC25A22Q9H936 323 aa6.27□□□□□ -1.41
SMG6-210ENST00000572205 UQCC1Q9NVA1 299 aa6.27□□□□□ -1.41
SMG6-210ENST00000572205 MGAT4CQ9UBM8 478 aa6.27□□□□□ -1.41
SMG6-210ENST00000572205 HIGD1AQ9Y241 93 aa6.27□□□□□ -1.41
SMG6-210ENST00000572205 LCE6AA0A183 80 aa6.26□□□□□ -1.41
SMG6-210ENST00000572205 ZNF705FA8MVS1 300 aaPredicted RBP6.26□□□□□ -1.41
SMG6-210ENST00000572205 H3BQ15 152 aa6.26□□□□□ -1.41
SMG6-210ENST00000572205 L7N2F9 121 aa6.26□□□□□ -1.41
SMG6-210ENST00000572205 CRXO43186 299 aaPredicted RBP6.26□□□□□ -1.41
SMG6-210ENST00000572205 ZNF705DP0CH99 300 aaPredicted RBP6.26□□□□□ -1.41
SMG6-210ENST00000572205 ZNF705BP0CI00 300 aaPredicted RBP6.26□□□□□ -1.41
SMG6-210ENST00000572205 RPL29P47914 159 aaKnown RBP6.26□□□□□ -1.41
SMG6-210ENST00000572205 CAMLGP49069 296 aa6.26□□□□□ -1.41
SMG6-210ENST00000572205 VAMP2P63027 116 aa6.26□□□□□ -1.41
SMG6-210ENST00000572205 LRRC37A5PQ49AS3 106 aa6.26□□□□□ -1.41
SMG6-210ENST00000572205 PXDC1Q5TGL8 231 aa6.26□□□□□ -1.41
SMG6-210ENST00000572205 MORN3Q6PF18 240 aaPredicted RBP6.26□□□□□ -1.41
SMG6-210ENST00000572205 STHQ8IWL8 128 aa6.26□□□□□ -1.41
SMG6-210ENST00000572205 NUDT10Q8NFP7 164 aa6.26□□□□□ -1.41
SMG6-210ENST00000572205 OR5C1Q8NGR4 320 aa6.26□□□□□ -1.41
SMG6-210ENST00000572205 SAT2Q96F10 170 aaPredicted RBP6.26□□□□□ -1.41
SMG6-210ENST00000572205 NUDT11Q96G61 164 aa6.26□□□□□ -1.41
SMG6-210ENST00000572205 FAM167A-AS1Q96KT0 104 aa6.26□□□□□ -1.41
SMG6-210ENST00000572205 RSG1Q9BU20 258 aa6.26□□□□□ -1.41
SMG6-210ENST00000572205 SLC35B3Q9H1N7 401 aa6.26□□□□□ -1.41
SMG6-210ENST00000572205 CLEC5AQ9NY25 188 aa6.26□□□□□ -1.41
SMG6-210ENST00000572205 MBD2Q9UBB5 411 aa6.26□□□□□ -1.41
SMG6-210ENST00000572205 BIRC6Q9NR09 4857 aa6.26□□□□□ -1.41
SMG6-210ENST00000572205 TRAV5A0A0B4J249 113 aa6.25□□□□□ -1.41
SMG6-210ENST00000572205 IGHV4-28A0A0C4DH34 117 aa6.25□□□□□ -1.41
SMG6-210ENST00000572205 E5RGE8 158 aa6.25□□□□□ -1.41
SMG6-210ENST00000572205 PRB4P10163 310 aaPredicted RBP6.25□□□□□ -1.41
SMG6-210ENST00000572205 S100A11P31949 105 aa6.25□□□□□ -1.41
SMG6-210ENST00000572205 GALR1P47211 349 aa6.25□□□□□ -1.41
SMG6-210ENST00000572205 MEOX2P50222 304 aa6.25□□□□□ -1.41
SMG6-210ENST00000572205 BCAP31P51572 246 aa6.25□□□□□ -1.41
SMG6-210ENST00000572205 PTTG1IPP53801 180 aa6.25□□□□□ -1.41
SMG6-210ENST00000572205 SNRPD3P62318 126 aaKnown RBP6.25□□□□□ -1.41
SMG6-210ENST00000572205 BAXQ07812 192 aa6.25□□□□□ -1.41
SMG6-210ENST00000572205 OXA1LQ15070 435 aa6.25□□□□□ -1.41
SMG6-210ENST00000572205 FCN2Q15485 313 aa6.25□□□□□ -1.41
SMG6-210ENST00000572205 Q5BKY6 102 aa6.25□□□□□ -1.41
SMG6-210ENST00000572205 SPATA31B1PQ5VZV4 182 aa6.25□□□□□ -1.41
SMG6-210ENST00000572205 LINC00305Q7Z4B0 112 aa6.25□□□□□ -1.41
SMG6-210ENST00000572205 OR11H2Q8NH07 326 aa6.25□□□□□ -1.41
SMG6-210ENST00000572205 THAP6Q8TBB0 222 aa6.25□□□□□ -1.41
SMG6-210ENST00000572205 GPR82Q96P67 336 aa6.25□□□□□ -1.41
SMG6-210ENST00000572205 WFDC1Q9HC57 220 aa6.25□□□□□ -1.41
SMG6-210ENST00000572205 ZNF331Q9NQX6 463 aaPredicted RBP6.25□□□□□ -1.41
SMG6-210ENST00000572205 SLC39A9Q9NUM3 307 aa6.25□□□□□ -1.41
SMG6-210ENST00000572205 CELA1Q9UNI1 258 aa6.25□□□□□ -1.41
SMG6-210ENST00000572205 HSPB11Q9Y547 144 aa6.25□□□□□ -1.41
SMG6-210ENST00000572205 RFNGQ9Y644 331 aa6.25□□□□□ -1.41
SMG6-210ENST00000572205 PXMP4Q9Y6I8 212 aa6.25□□□□□ -1.41
SMG6-210ENST00000572205 DEFB4AO15263 64 aa6.24□□□□□ -1.41
SMG6-210ENST00000572205 NDUFB4O95168 129 aa6.24□□□□□ -1.41
SMG6-210ENST00000572205 OR5G3P0C626 314 aa6.24□□□□□ -1.41
SMG6-210ENST00000572205 RPL7P18124 248 aaKnown RBP6.24□□□□□ -1.41
SMG6-210ENST00000572205 CXCL2P19875 107 aa6.24□□□□□ -1.41
SMG6-210ENST00000572205 PVALBP20472 110 aaPredicted RBP6.24□□□□□ -1.41
SMG6-210ENST00000572205 FGF7P21781 194 aa6.24□□□□□ -1.41
SMG6-210ENST00000572205 B2MP61769 119 aa6.24□□□□□ -1.41
SMG6-210ENST00000572205 TMEM41BQ5BJD5 291 aa6.24□□□□□ -1.41
SMG6-210ENST00000572205 FAM78BQ5VT40 261 aa6.24□□□□□ -1.41
SMG6-210ENST00000572205 STX12Q86Y82 276 aa6.24□□□□□ -1.41
SMG6-210ENST00000572205 C1orf158Q8N1D5 194 aa6.24□□□□□ -1.41
SMG6-210ENST00000572205 ZNF503Q96F45 646 aa6.24□□□□□ -1.41
SMG6-210ENST00000572205 RARRES2Q99969 163 aa6.24□□□□□ -1.41
SMG6-210ENST00000572205 SLC25A2Q9BXI2 301 aa6.24□□□□□ -1.41
SMG6-210ENST00000572205 WDR61Q9GZS3 305 aaKnown RBP6.24□□□□□ -1.41
SMG6-210ENST00000572205 PLAC8L1A1L4L8 177 aa6.23□□□□□ -1.41
SMG6-210ENST00000572205 RNF222A6NCQ9 220 aa6.23□□□□□ -1.41
SMG6-210ENST00000572205 PRAC2D3DTV9 90 aa6.23□□□□□ -1.41
SMG6-210ENST00000572205 H3BTX0 84 aa6.23□□□□□ -1.41
SMG6-210ENST00000572205 SSNA1O43805 119 aa6.23□□□□□ -1.41
SMG6-210ENST00000572205 MPDU1O75352 247 aa6.23□□□□□ -1.41
SMG6-210ENST00000572205 SNRPCP09234 159 aaKnown RBP6.23□□□□□ -1.41
SMG6-210ENST00000572205 CNN1P51911 297 aaKnown RBP6.23□□□□□ -1.41
SMG6-210ENST00000572205 RAP2BP61225 183 aa6.23□□□□□ -1.41
SMG6-210ENST00000572205 HBG1P69891 147 aa6.23□□□□□ -1.41
SMG6-210ENST00000572205 HBG2P69892 147 aa6.23□□□□□ -1.41
SMG6-210ENST00000572205 CLINT1Q14677 625 aa6.23□□□□□ -1.41
SMG6-210ENST00000572205 ATP6V1FQ16864 119 aa6.23□□□□□ -1.41
SMG6-210ENST00000572205 SAMD13Q5VXD3 122 aa6.23□□□□□ -1.41
SMG6-210ENST00000572205 PPP1R14BQ96C90 147 aa6.23□□□□□ -1.41
SMG6-210ENST00000572205 LINC00052Q96N35 136 aa6.23□□□□□ -1.41
SMG6-210ENST00000572205 NEU1Q99519 415 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms