RNA–Protein interactions for RNA: ENST00000571886.1

GTF3C1-213, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-213ENST00000571886 CYCSP99999 105 aaKnown RBP7.39□□□□□ -1.23
GTF3C1-213ENST00000571886 CLINT1Q14677 625 aa7.39□□□□□ -1.23
GTF3C1-213ENST00000571886 ATP6V1FQ16864 119 aa7.39□□□□□ -1.23
GTF3C1-213ENST00000571886 TMEM41BQ5BJD5 291 aa7.39□□□□□ -1.23
GTF3C1-213ENST00000571886 GCSAMLQ5JQS6 135 aa7.39□□□□□ -1.23
GTF3C1-213ENST00000571886 PXDC1Q5TGL8 231 aa7.39□□□□□ -1.23
GTF3C1-213ENST00000571886 C10orf113Q5VZT2 155 aa7.39□□□□□ -1.23
GTF3C1-213ENST00000571886 AMTNQ6UX39 209 aa7.39□□□□□ -1.23
GTF3C1-213ENST00000571886 STX12Q86Y82 276 aa7.39□□□□□ -1.23
GTF3C1-213ENST00000571886 OR5C1Q8NGR4 320 aa7.39□□□□□ -1.23
GTF3C1-213ENST00000571886 THAP6Q8TBB0 222 aa7.39□□□□□ -1.23
GTF3C1-213ENST00000571886 CLUHP3Q96NS8 147 aa7.39□□□□□ -1.23
GTF3C1-213ENST00000571886 C11orf68Q9H3H3 251 aaKnown RBP7.39□□□□□ -1.23
GTF3C1-213ENST00000571886 RPRMQ9NS64 109 aa7.39□□□□□ -1.23
GTF3C1-213ENST00000571886 SLC39A9Q9NUM3 307 aa7.39□□□□□ -1.23
GTF3C1-213ENST00000571886 PXMP4Q9Y6I8 212 aa7.39□□□□□ -1.23
GTF3C1-213ENST00000571886 HYDINQ4G0P3 5121 aa7.39□□□□□ -1.23
GTF3C1-213ENST00000571886 DNAH1Q9P2D7 4330 aa7.38□□□□□ -1.23
GTF3C1-213ENST00000571886 ZNF705FA8MVS1 300 aaPredicted RBP7.38□□□□□ -1.23
GTF3C1-213ENST00000571886 H3BQ15 152 aa7.38□□□□□ -1.23
GTF3C1-213ENST00000571886 SLC17A3O00476 420 aa7.38□□□□□ -1.23
GTF3C1-213ENST00000571886 RGS13O14921 159 aa7.38□□□□□ -1.23
GTF3C1-213ENST00000571886 PRM2P04554 102 aa7.38□□□□□ -1.23
GTF3C1-213ENST00000571886 S100A7P31151 101 aa7.38□□□□□ -1.23
GTF3C1-213ENST00000571886 CNN1P51911 297 aaKnown RBP7.38□□□□□ -1.23
GTF3C1-213ENST00000571886 PSG9Q00887 426 aa7.38□□□□□ -1.23
GTF3C1-213ENST00000571886 RAB31Q13636 194 aa7.38□□□□□ -1.23
GTF3C1-213ENST00000571886 FCN2Q15485 313 aa7.38□□□□□ -1.23
GTF3C1-213ENST00000571886 EBLN2Q6P2I7 272 aa7.38□□□□□ -1.23
GTF3C1-213ENST00000571886 CEMP1Q6PRD7 247 aaPredicted RBP7.38□□□□□ -1.23
GTF3C1-213ENST00000571886 Q6ZRG5 221 aa7.38□□□□□ -1.23
GTF3C1-213ENST00000571886 TCTE3Q8IZS6 198 aa7.38□□□□□ -1.23
GTF3C1-213ENST00000571886 C1orf158Q8N1D5 194 aa7.38□□□□□ -1.23
GTF3C1-213ENST00000571886 OR11H7Q8NGC8 314 aa7.38□□□□□ -1.23
GTF3C1-213ENST00000571886 C11orf45Q8TAV5 145 aa7.38□□□□□ -1.23
GTF3C1-213ENST00000571886 PHLDA1Q8WV24 401 aaPredicted RBP7.38□□□□□ -1.23
GTF3C1-213ENST00000571886 SLC25A31Q9H0C2 315 aa7.38□□□□□ -1.23
GTF3C1-213ENST00000571886 CELA1Q9UNI1 258 aa7.38□□□□□ -1.23
GTF3C1-213ENST00000571886 RFNGQ9Y644 331 aa7.38□□□□□ -1.23
GTF3C1-213ENST00000571886 IGHV3OR16-12A0A075B7B8 117 aa7.37□□□□□ -1.23
GTF3C1-213ENST00000571886 ATP6V1G1O75348 118 aa7.37□□□□□ -1.23
GTF3C1-213ENST00000571886 IGLC2P0DOY2 106 aa7.37□□□□□ -1.23
GTF3C1-213ENST00000571886 MIFP14174 115 aa7.37□□□□□ -1.23
GTF3C1-213ENST00000571886 NUTF2P61970 127 aaKnown RBP7.37□□□□□ -1.23
GTF3C1-213ENST00000571886 PSG3Q16557 428 aa7.37□□□□□ -1.23
GTF3C1-213ENST00000571886 SPATA31B1PQ5VZV4 182 aa7.37□□□□□ -1.23
GTF3C1-213ENST00000571886 ZNF705AQ6ZN79 300 aaPredicted RBP7.37□□□□□ -1.23
GTF3C1-213ENST00000571886 ZNF738Q8NE65 137 aa7.37□□□□□ -1.23
GTF3C1-213ENST00000571886 SAT2Q96F10 170 aaPredicted RBP7.37□□□□□ -1.23
GTF3C1-213ENST00000571886 NPCDR1Q9BY65 106 aa7.37□□□□□ -1.23
GTF3C1-213ENST00000571886 SMIM3Q9BZL3 60 aa7.37□□□□□ -1.23
GTF3C1-213ENST00000571886 WDR61Q9GZS3 305 aaKnown RBP7.37□□□□□ -1.23
GTF3C1-213ENST00000571886 MFFQ9GZY8 342 aa7.37□□□□□ -1.23
GTF3C1-213ENST00000571886 WFDC1Q9HC57 220 aa7.37□□□□□ -1.23
GTF3C1-213ENST00000571886 ZNF331Q9NQX6 463 aaPredicted RBP7.37□□□□□ -1.23
GTF3C1-213ENST00000571886 ZNF586Q9NXT0 402 aa7.37□□□□□ -1.23
GTF3C1-213ENST00000571886 MBD2Q9UBB5 411 aa7.37□□□□□ -1.23
GTF3C1-213ENST00000571886 HSPB11Q9Y547 144 aa7.37□□□□□ -1.23
GTF3C1-213ENST00000571886 PRAC2D3DTV9 90 aa7.36□□□□□ -1.23
GTF3C1-213ENST00000571886 M0R2Z0 102 aa7.36□□□□□ -1.23
GTF3C1-213ENST00000571886 CRXO43186 299 aaPredicted RBP7.36□□□□□ -1.23
GTF3C1-213ENST00000571886 SPINK13Q1W4C9 94 aa7.36□□□□□ -1.23
GTF3C1-213ENST00000571886 ZFP69Q49AA0 526 aa7.36□□□□□ -1.23
GTF3C1-213ENST00000571886 Q5BKY6 102 aa7.36□□□□□ -1.23
GTF3C1-213ENST00000571886 SAMD13Q5VXD3 122 aa7.36□□□□□ -1.23
GTF3C1-213ENST00000571886 ZNF767PQ75MW2 155 aa7.36□□□□□ -1.23
GTF3C1-213ENST00000571886 BPIFA4PQ86YQ2 179 aa7.36□□□□□ -1.23
GTF3C1-213ENST00000571886 OR1L4Q8NGR5 311 aa7.36□□□□□ -1.23
GTF3C1-213ENST00000571886 LRRC20Q8TCA0 184 aa7.36□□□□□ -1.23
GTF3C1-213ENST00000571886 C1QTNF4Q9BXJ3 329 aa7.36□□□□□ -1.23
GTF3C1-213ENST00000571886 TRAV12-2A0A075B6T6 113 aa7.35□□□□□ -1.23
GTF3C1-213ENST00000571886 NUPR2A6NF83 97 aa7.35□□□□□ -1.23
GTF3C1-213ENST00000571886 MPDU1O75352 247 aa7.35□□□□□ -1.23
GTF3C1-213ENST00000571886 PYYP10082 97 aa7.35□□□□□ -1.23
GTF3C1-213ENST00000571886 RPL12P30050 165 aaKnown RBP7.35□□□□□ -1.23
GTF3C1-213ENST00000571886 HIST1H1AQ02539 215 aaPredicted RBP7.35□□□□□ -1.23
GTF3C1-213ENST00000571886 MIR17HGQ75NE6 70 aa7.35□□□□□ -1.23
GTF3C1-213ENST00000571886 S100A7AQ86SG5 101 aa7.35□□□□□ -1.23
GTF3C1-213ENST00000571886 OR8A1Q8NGG7 326 aa7.35□□□□□ -1.23
GTF3C1-213ENST00000571886 RPUSD4Q96CM3 377 aaKnown RBP7.35□□□□□ -1.23
GTF3C1-213ENST00000571886 FAM167A-AS1Q96KT0 104 aa7.35□□□□□ -1.23
GTF3C1-213ENST00000571886 PFDN5Q99471 154 aa7.35□□□□□ -1.23
GTF3C1-213ENST00000571886 PARD6GQ9BYG4 376 aaPredicted RBP7.35□□□□□ -1.23
GTF3C1-213ENST00000571886 HRH4Q9H3N8 390 aa7.35□□□□□ -1.23
GTF3C1-213ENST00000571886 PLA2G2EQ9NZK7 142 aa7.35□□□□□ -1.23
GTF3C1-213ENST00000571886 ALMS1Q8TCU4 4167 aa7.34□□□□□ -1.23
GTF3C1-213ENST00000571886 EIF3GO75821 320 aaKnown RBP eCLIP7.34□□□□□ -1.23
GTF3C1-213ENST00000571886 DUSP14O95147 198 aaKnown RBP7.34□□□□□ -1.23
GTF3C1-213ENST00000571886 NDUFB4O95168 129 aa7.34□□□□□ -1.23
GTF3C1-213ENST00000571886 C1QBP02746 253 aa7.34□□□□□ -1.23
GTF3C1-213ENST00000571886 CXCL2P19875 107 aa7.34□□□□□ -1.23
GTF3C1-213ENST00000571886 S100A1P23297 94 aa7.34□□□□□ -1.23
GTF3C1-213ENST00000571886 IFITM2Q01629 132 aa7.34□□□□□ -1.23
GTF3C1-213ENST00000571886 KIR3DS1Q14943 382 aa7.34□□□□□ -1.23
GTF3C1-213ENST00000571886 C12orf74Q32Q52 190 aa7.34□□□□□ -1.23
GTF3C1-213ENST00000571886 LCN15Q6UWW0 184 aa7.34□□□□□ -1.23
GTF3C1-213ENST00000571886 Q6ZTC4 211 aa7.34□□□□□ -1.23
GTF3C1-213ENST00000571886 BAP18Q8IXM2 172 aa7.34□□□□□ -1.23
GTF3C1-213ENST00000571886 IGF2BP2-AS1Q96M15 143 aa7.34□□□□□ -1.23
GTF3C1-213ENST00000571886 NEU1Q99519 415 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms