RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 ASAH1Q13510 395 aa12.17□□□□□ -0.46
MAP1LC3B-208ENST00000570189 PSG3Q16557 428 aa12.17□□□□□ -0.46
MAP1LC3B-208ENST00000570189 FAM222AQ5U5X8 452 aa12.17□□□□□ -0.46
MAP1LC3B-208ENST00000570189 ZNF767PQ75MW2 155 aa12.17□□□□□ -0.46
MAP1LC3B-208ENST00000570189 LINC00305Q7Z4B0 112 aa12.17□□□□□ -0.46
MAP1LC3B-208ENST00000570189 RNF182Q8N6D2 247 aa12.17□□□□□ -0.46
MAP1LC3B-208ENST00000570189 CHAC2Q8WUX2 184 aa12.17□□□□□ -0.46
MAP1LC3B-208ENST00000570189 SEC22CQ9BRL7 303 aa12.17□□□□□ -0.46
MAP1LC3B-208ENST00000570189 SLC50A1Q9BRV3 221 aa12.17□□□□□ -0.46
MAP1LC3B-208ENST00000570189 LYRM2Q9NU23 88 aaPredicted RBP12.17□□□□□ -0.46
MAP1LC3B-208ENST00000570189 BOLA2-SMG1P6H3BVE0 249 aa12.16□□□□□ -0.46
MAP1LC3B-208ENST00000570189 IGFL4Q6B9Z1 124 aa12.16□□□□□ -0.46
MAP1LC3B-208ENST00000570189 BPIFA4PQ86YQ2 179 aa12.16□□□□□ -0.46
MAP1LC3B-208ENST00000570189 ZNF738Q8NE65 137 aa12.16□□□□□ -0.46
MAP1LC3B-208ENST00000570189 OR8A1Q8NGG7 326 aa12.16□□□□□ -0.46
MAP1LC3B-208ENST00000570189 TMEM37Q8WXS4 190 aa12.16□□□□□ -0.46
MAP1LC3B-208ENST00000570189 ZNF331Q9NQX6 463 aaPredicted RBP12.16□□□□□ -0.46
MAP1LC3B-208ENST00000570189 WDR83OSQ9Y284 106 aa12.16□□□□□ -0.46
MAP1LC3B-208ENST00000570189 YTHDF2Q9Y5A9 579 aaKnown RBP12.16□□□□□ -0.46
MAP1LC3B-208ENST00000570189 FAM240BA0A1B0GVZ2 78 aa12.15□□□□□ -0.46
MAP1LC3B-208ENST00000570189 C5orf51A6NDU8 294 aa12.15□□□□□ -0.46
MAP1LC3B-208ENST00000570189 PVALBP20472 110 aaPredicted RBP12.15□□□□□ -0.46
MAP1LC3B-208ENST00000570189 FGL1Q08830 312 aa12.15□□□□□ -0.46
MAP1LC3B-208ENST00000570189 RAB31Q13636 194 aa12.15□□□□□ -0.46
MAP1LC3B-208ENST00000570189 SPINK13Q1W4C9 94 aa12.15□□□□□ -0.46
MAP1LC3B-208ENST00000570189 MZT2BQ6NZ67 158 aa12.15□□□□□ -0.46
MAP1LC3B-208ENST00000570189 TMEM256Q8N2U0 113 aa12.15□□□□□ -0.46
MAP1LC3B-208ENST00000570189 POM121L12Q8N7R1 296 aa12.15□□□□□ -0.46
MAP1LC3B-208ENST00000570189 LSM5Q9Y4Y9 91 aaKnown RBP12.15□□□□□ -0.46
MAP1LC3B-208ENST00000570189 LYRM9A8MSI8 78 aa12.14□□□□□ -0.47
MAP1LC3B-208ENST00000570189 FAM25EA8MYX2 175 aa12.14□□□□□ -0.47
MAP1LC3B-208ENST00000570189 M0R2Z0 102 aa12.14□□□□□ -0.47
MAP1LC3B-208ENST00000570189 S100A11P31949 105 aa12.14□□□□□ -0.47
MAP1LC3B-208ENST00000570189 CAMLGP49069 296 aa12.14□□□□□ -0.47
MAP1LC3B-208ENST00000570189 SULT1A1P50225 295 aa12.14□□□□□ -0.47
MAP1LC3B-208ENST00000570189 EMP1P54849 157 aa12.14□□□□□ -0.47
MAP1LC3B-208ENST00000570189 C10orf113Q5VZT2 155 aa12.14□□□□□ -0.47
MAP1LC3B-208ENST00000570189 TMEM208Q9BTX3 173 aa12.14□□□□□ -0.47
MAP1LC3B-208ENST00000570189 UQCC1Q9NVA1 299 aa12.14□□□□□ -0.47
MAP1LC3B-208ENST00000570189 COX7A2P2O60397 106 aa12.13□□□□□ -0.47
MAP1LC3B-208ENST00000570189 IGLC2P0DOY2 106 aa12.13□□□□□ -0.47
MAP1LC3B-208ENST00000570189 RPL29P47914 159 aaKnown RBP12.13□□□□□ -0.47
MAP1LC3B-208ENST00000570189 CAV2P51636 162 aa12.13□□□□□ -0.47
MAP1LC3B-208ENST00000570189 PFDN5Q99471 154 aa12.13□□□□□ -0.47
MAP1LC3B-208ENST00000570189 DNAJC4Q9NNZ3 241 aa12.13□□□□□ -0.47
MAP1LC3B-208ENST00000570189 PXMP4Q9Y6I8 212 aa12.13□□□□□ -0.47
MAP1LC3B-208ENST00000570189 FAM24AA6NFZ4 105 aa12.12□□□□□ -0.47
MAP1LC3B-208ENST00000570189 CST7O76096 145 aa12.12□□□□□ -0.47
MAP1LC3B-208ENST00000570189 BCAP31P51572 246 aa12.12□□□□□ -0.47
MAP1LC3B-208ENST00000570189 HBG1P69891 147 aa12.12□□□□□ -0.47
MAP1LC3B-208ENST00000570189 HBG2P69892 147 aa12.12□□□□□ -0.47
MAP1LC3B-208ENST00000570189 HIST1H1AQ02539 215 aaPredicted RBP12.12□□□□□ -0.47
MAP1LC3B-208ENST00000570189 OPCMLQ14982 345 aa12.12□□□□□ -0.47
MAP1LC3B-208ENST00000570189 GUK1Q16774 197 aa12.12□□□□□ -0.47
MAP1LC3B-208ENST00000570189 ATP6V1FQ16864 119 aa12.12□□□□□ -0.47
MAP1LC3B-208ENST00000570189 Q6ZRG5 221 aa12.12□□□□□ -0.47
MAP1LC3B-208ENST00000570189 NRARPQ7Z6K4 114 aa12.12□□□□□ -0.47
MAP1LC3B-208ENST00000570189 BAP18Q8IXM2 172 aa12.12□□□□□ -0.47
MAP1LC3B-208ENST00000570189 TMEM252Q8N6L7 170 aa12.12□□□□□ -0.47
MAP1LC3B-208ENST00000570189 OR1L4Q8NGR5 311 aa12.12□□□□□ -0.47
MAP1LC3B-208ENST00000570189 LRRC20Q8TCA0 184 aa12.12□□□□□ -0.47
MAP1LC3B-208ENST00000570189 RPUSD4Q96CM3 377 aaKnown RBP12.12□□□□□ -0.47
MAP1LC3B-208ENST00000570189 SAT2Q96F10 170 aaPredicted RBP12.12□□□□□ -0.47
MAP1LC3B-208ENST00000570189 C20orf144Q9BQM9 153 aa12.12□□□□□ -0.47
MAP1LC3B-208ENST00000570189 PLAC8L1A1L4L8 177 aa12.11□□□□□ -0.47
MAP1LC3B-208ENST00000570189 ZNF253O75346 499 aa12.11□□□□□ -0.47
MAP1LC3B-208ENST00000570189 CDKN1BP46527 198 aa12.11□□□□□ -0.47
MAP1LC3B-208ENST00000570189 DAD1P61803 113 aa12.11□□□□□ -0.47
MAP1LC3B-208ENST00000570189 RAB32Q13637 225 aa12.11□□□□□ -0.47
MAP1LC3B-208ENST00000570189 MORN5Q5VZ52 161 aa12.11□□□□□ -0.47
MAP1LC3B-208ENST00000570189 STX12Q86Y82 276 aa12.11□□□□□ -0.47
MAP1LC3B-208ENST00000570189 IGSF23A1L1A6 192 aa12.1□□□□□ -0.47
MAP1LC3B-208ENST00000570189 MPDU1O75352 247 aa12.1□□□□□ -0.47
MAP1LC3B-208ENST00000570189 TAS2R60P59551 318 aa12.1□□□□□ -0.47
MAP1LC3B-208ENST00000570189 RNF212Q495C1 297 aa12.1□□□□□ -0.47
MAP1LC3B-208ENST00000570189 MIC13Q5XKP0 118 aa12.1□□□□□ -0.47
MAP1LC3B-208ENST00000570189 ODF3Q96PU9 254 aa12.1□□□□□ -0.47
MAP1LC3B-208ENST00000570189 NACAE9PAV3 2078 aa12.1□□□□□ -0.47
MAP1LC3B-208ENST00000570189 SLC17A3O00476 420 aa12.09□□□□□ -0.47
MAP1LC3B-208ENST00000570189 UPK1BO75841 260 aa12.09□□□□□ -0.47
MAP1LC3B-208ENST00000570189 S100A10P60903 97 aa12.09□□□□□ -0.47
MAP1LC3B-208ENST00000570189 RHOBP62745 196 aa12.09□□□□□ -0.47
MAP1LC3B-208ENST00000570189 ZNF493Q6ZR52 646 aa12.09□□□□□ -0.47
MAP1LC3B-208ENST00000570189 LINC00336Q6ZUF6 198 aa12.09□□□□□ -0.47
MAP1LC3B-208ENST00000570189 GPN1Q9HCN4 374 aaPredicted RBP12.09□□□□□ -0.47
MAP1LC3B-208ENST00000570189 FAT2Q9NYQ8 4349 aa12.08□□□□□ -0.48
MAP1LC3B-208ENST00000570189 TRAV12-2A0A075B6T6 113 aa12.08□□□□□ -0.48
MAP1LC3B-208ENST00000570189 A6NHS1 94 aa12.08□□□□□ -0.48
MAP1LC3B-208ENST00000570189 ZNF705GA8MUZ8 300 aaPredicted RBP12.08□□□□□ -0.48
MAP1LC3B-208ENST00000570189 H3BQ15 152 aa12.08□□□□□ -0.48
MAP1LC3B-208ENST00000570189 PRAF2O60831 178 aa12.08□□□□□ -0.48
MAP1LC3B-208ENST00000570189 LGALS9BQ3B8N2 356 aa12.08□□□□□ -0.48
MAP1LC3B-208ENST00000570189 C15orf53Q8NAA6 179 aa12.08□□□□□ -0.48
MAP1LC3B-208ENST00000570189 MRPL53Q96EL3 112 aaKnown RBP12.08□□□□□ -0.48
MAP1LC3B-208ENST00000570189 C16orf74Q96GX8 76 aa12.08□□□□□ -0.48
MAP1LC3B-208ENST00000570189 NMES1Q9C002 83 aa12.08□□□□□ -0.48
MAP1LC3B-208ENST00000570189 SLC39A9Q9NUM3 307 aa12.08□□□□□ -0.48
MAP1LC3B-208ENST00000570189 PLA2G2EQ9NZK7 142 aa12.08□□□□□ -0.48
MAP1LC3B-208ENST00000570189 TMEM14CQ9P0S9 112 aa12.08□□□□□ -0.48
MAP1LC3B-208ENST00000570189 DNAH17Q9UFH2 4485 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms