RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 PXDC1Q5TGL8 231 aa10.45□□□□□ -0.74
FANCA-220ENST00000566409 S100ZQ8WXG8 99 aa10.45□□□□□ -0.74
FANCA-220ENST00000566409 IGF2BP2-AS1Q96M15 143 aa10.45□□□□□ -0.74
FANCA-220ENST00000566409 RNF126Q9BV68 326 aa10.45□□□□□ -0.74
FANCA-220ENST00000566409 DKK2Q9UBU2 259 aa10.45□□□□□ -0.74
FANCA-220ENST00000566409 GOLT1BQ9Y3E0 138 aa10.45□□□□□ -0.74
FANCA-220ENST00000566409 IGSF23A1L1A6 192 aa10.44□□□□□ -0.74
FANCA-220ENST00000566409 TMEM189A5PLL7 270 aa10.44□□□□□ -0.74
FANCA-220ENST00000566409 DUSP14O95147 198 aaKnown RBP10.44□□□□□ -0.74
FANCA-220ENST00000566409 CAMLGP49069 296 aa10.44□□□□□ -0.74
FANCA-220ENST00000566409 PSG3Q16557 428 aa10.44□□□□□ -0.74
FANCA-220ENST00000566409 VWC2Q2TAL6 325 aa10.44□□□□□ -0.74
FANCA-220ENST00000566409 FAM222AQ5U5X8 452 aa10.44□□□□□ -0.74
FANCA-220ENST00000566409 MZT2BQ6NZ67 158 aa10.44□□□□□ -0.74
FANCA-220ENST00000566409 NRARPQ7Z6K4 114 aa10.44□□□□□ -0.74
FANCA-220ENST00000566409 ZNF738Q8NE65 137 aa10.44□□□□□ -0.74
FANCA-220ENST00000566409 LYRM2Q9NU23 88 aaPredicted RBP10.44□□□□□ -0.74
FANCA-220ENST00000566409 WDR83OSQ9Y284 106 aa10.44□□□□□ -0.74
FANCA-220ENST00000566409 UPK1BO75841 260 aa10.43□□□□□ -0.74
FANCA-220ENST00000566409 HBE1P02100 147 aa10.43□□□□□ -0.74
FANCA-220ENST00000566409 AMBPP02760 352 aa10.43□□□□□ -0.74
FANCA-220ENST00000566409 S100A10P60903 97 aa10.43□□□□□ -0.74
FANCA-220ENST00000566409 OPCMLQ14982 345 aa10.43□□□□□ -0.74
FANCA-220ENST00000566409 MIC13Q5XKP0 118 aa10.43□□□□□ -0.74
FANCA-220ENST00000566409 TMEM252Q8N6L7 170 aa10.43□□□□□ -0.74
FANCA-220ENST00000566409 OR8A1Q8NGG7 326 aa10.43□□□□□ -0.74
FANCA-220ENST00000566409 ZNF331Q9NQX6 463 aaPredicted RBP10.43□□□□□ -0.74
FANCA-220ENST00000566409 DNAH17Q9UFH2 4485 aa10.43□□□□□ -0.74
FANCA-220ENST00000566409 FAT2Q9NYQ8 4349 aa10.42□□□□□ -0.74
FANCA-220ENST00000566409 TRAV12-2A0A075B6T6 113 aa10.42□□□□□ -0.74
FANCA-220ENST00000566409 TRAV5A0A0B4J249 113 aa10.42□□□□□ -0.74
FANCA-220ENST00000566409 LOC102723971A0A1B0GUV8 181 aa10.42□□□□□ -0.74
FANCA-220ENST00000566409 H3BQ15 152 aa10.42□□□□□ -0.74
FANCA-220ENST00000566409 H3BTX0 84 aa10.42□□□□□ -0.74
FANCA-220ENST00000566409 SLC17A3O00476 420 aa10.42□□□□□ -0.74
FANCA-220ENST00000566409 COX7A2P2O60397 106 aa10.42□□□□□ -0.74
FANCA-220ENST00000566409 SIX6O95475 246 aa10.42□□□□□ -0.74
FANCA-220ENST00000566409 IGLC2P0DOY2 106 aa10.42□□□□□ -0.74
FANCA-220ENST00000566409 SULT1A1P50225 295 aa10.42□□□□□ -0.74
FANCA-220ENST00000566409 HIST1H1AQ02539 215 aaPredicted RBP10.42□□□□□ -0.74
FANCA-220ENST00000566409 S100A7AQ86SG5 101 aa10.42□□□□□ -0.74
FANCA-220ENST00000566409 BAP18Q8IXM2 172 aa10.42□□□□□ -0.74
FANCA-220ENST00000566409 DNAJC4Q9NNZ3 241 aa10.42□□□□□ -0.74
FANCA-220ENST00000566409 UQCC1Q9NVA1 299 aa10.42□□□□□ -0.74
FANCA-220ENST00000566409 YTHDF2Q9Y5A9 579 aaKnown RBP10.42□□□□□ -0.74
FANCA-220ENST00000566409 ZNF705GA8MUZ8 300 aaPredicted RBP10.41□□□□□ -0.74
FANCA-220ENST00000566409 PRAC2D3DTV9 90 aa10.41□□□□□ -0.74
FANCA-220ENST00000566409 PVALBP20472 110 aaPredicted RBP10.41□□□□□ -0.74
FANCA-220ENST00000566409 RRN3P1Q2M238 152 aa10.41□□□□□ -0.74
FANCA-220ENST00000566409 C10orf113Q5VZT2 155 aa10.41□□□□□ -0.74
FANCA-220ENST00000566409 BPIFA4PQ86YQ2 179 aa10.41□□□□□ -0.74
FANCA-220ENST00000566409 LRRC20Q8TCA0 184 aa10.41□□□□□ -0.74
FANCA-220ENST00000566409 RPUSD4Q96CM3 377 aaKnown RBP10.41□□□□□ -0.74
FANCA-220ENST00000566409 NIPSNAP3BQ9BS92 247 aa10.41□□□□□ -0.74
FANCA-220ENST00000566409 UBE2L5PA0A1B0GUS4 154 aa10.4□□□□□ -0.74
FANCA-220ENST00000566409 BOLA2-SMG1P6H3BVE0 249 aa10.4□□□□□ -0.74
FANCA-220ENST00000566409 INSP01308 110 aa10.4□□□□□ -0.74
FANCA-220ENST00000566409 CXCL2P19875 107 aa10.4□□□□□ -0.74
FANCA-220ENST00000566409 AZU1P20160 251 aa10.4□□□□□ -0.74
FANCA-220ENST00000566409 S100A11P31949 105 aa10.4□□□□□ -0.74
FANCA-220ENST00000566409 RPL29P47914 159 aaKnown RBP10.4□□□□□ -0.74
FANCA-220ENST00000566409 RAB31Q13636 194 aa10.4□□□□□ -0.74
FANCA-220ENST00000566409 LCN15Q6UWW0 184 aa10.4□□□□□ -0.74
FANCA-220ENST00000566409 SAT2Q96F10 170 aaPredicted RBP10.4□□□□□ -0.74
FANCA-220ENST00000566409 TMEM208Q9BTX3 173 aa10.4□□□□□ -0.74
FANCA-220ENST00000566409 SLC39A9Q9NUM3 307 aa10.4□□□□□ -0.74
FANCA-220ENST00000566409 PTTG2Q9NZH5 202 aa10.4□□□□□ -0.74
FANCA-220ENST00000566409 RNF24Q9Y225 148 aa10.4□□□□□ -0.74
FANCA-220ENST00000566409 PLAC8L1A1L4L8 177 aa10.39□□□□□ -0.75
FANCA-220ENST00000566409 H0YIZ8 118 aa10.39□□□□□ -0.75
FANCA-220ENST00000566409 RHOBP62745 196 aa10.39□□□□□ -0.75
FANCA-220ENST00000566409 NHLH2Q02577 135 aa10.39□□□□□ -0.75
FANCA-220ENST00000566409 KIR3DS1Q14943 382 aa10.39□□□□□ -0.75
FANCA-220ENST00000566409 OXA1LQ15070 435 aa10.39□□□□□ -0.75
FANCA-220ENST00000566409 Q6ZRG5 221 aa10.39□□□□□ -0.75
FANCA-220ENST00000566409 ENKURQ8TC29 256 aa10.39□□□□□ -0.75
FANCA-220ENST00000566409 CHAC2Q8WUX2 184 aa10.39□□□□□ -0.75
FANCA-220ENST00000566409 SLC50A1Q9BRV3 221 aa10.39□□□□□ -0.75
FANCA-220ENST00000566409 NDUFAF3Q9BU61 184 aa10.39□□□□□ -0.75
FANCA-220ENST00000566409 B2MP61769 119 aa10.38□□□□□ -0.75
FANCA-220ENST00000566409 BAXQ07812 192 aa10.38□□□□□ -0.75
FANCA-220ENST00000566409 STX12Q86Y82 276 aa10.38□□□□□ -0.75
FANCA-220ENST00000566409 PARD6GQ9BYG4 376 aaPredicted RBP10.38□□□□□ -0.75
FANCA-220ENST00000566409 ZNF586Q9NXT0 402 aa10.38□□□□□ -0.75
FANCA-220ENST00000566409 OR5AC2Q9NZP5 309 aa10.38□□□□□ -0.75
FANCA-220ENST00000566409 TEX48A0A1B0GUV7 120 aa10.37□□□□□ -0.75
FANCA-220ENST00000566409 INMT-MINDY4F8WBC2 141 aa10.37□□□□□ -0.75
FANCA-220ENST00000566409 HTN3P15516 51 aa10.37□□□□□ -0.75
FANCA-220ENST00000566409 FGF7P21781 194 aa10.37□□□□□ -0.75
FANCA-220ENST00000566409 TSPOP30536 169 aa10.37□□□□□ -0.75
FANCA-220ENST00000566409 HBG1P69891 147 aa10.37□□□□□ -0.75
FANCA-220ENST00000566409 HBG2P69892 147 aa10.37□□□□□ -0.75
FANCA-220ENST00000566409 ATP6V1FQ16864 119 aa10.37□□□□□ -0.75
FANCA-220ENST00000566409 GCSAMLQ5JQS6 135 aa10.37□□□□□ -0.75
FANCA-220ENST00000566409 OR1L4Q8NGR5 311 aa10.37□□□□□ -0.75
FANCA-220ENST00000566409 MARVELD1Q9BSK0 173 aa10.37□□□□□ -0.75
FANCA-220ENST00000566409 NMES1Q9C002 83 aa10.37□□□□□ -0.75
FANCA-220ENST00000566409 GPN1Q9HCN4 374 aaPredicted RBP10.37□□□□□ -0.75
FANCA-220ENST00000566409 PXMP4Q9Y6I8 212 aa10.37□□□□□ -0.75
FANCA-220ENST00000566409 NACAE9PAV3 2078 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms