RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 FAM167A-AS1Q96KT0 104 aa6.23□□□□□ -1.41
UBR1-204ENST00000563239 C16orf92Q96LL3 132 aa6.23□□□□□ -1.41
UBR1-204ENST00000563239 AQP10Q96PS8 301 aa6.23□□□□□ -1.41
UBR1-204ENST00000563239 PARD6GQ9BYG4 376 aaPredicted RBP6.23□□□□□ -1.41
UBR1-204ENST00000563239 DYNC2H1Q8NCM8 4307 aaKnown RBP6.23□□□□□ -1.41
UBR1-204ENST00000563239 TENM2Q9NT68 2774 aa6.23□□□□□ -1.41
UBR1-204ENST00000563239 A0A0J9YX75 114 aa6.22□□□□□ -1.41
UBR1-204ENST00000563239 RNF222A6NCQ9 220 aa6.22□□□□□ -1.41
UBR1-204ENST00000563239 H3BTX0 84 aa6.22□□□□□ -1.41
UBR1-204ENST00000563239 SLC17A3O00476 420 aa6.22□□□□□ -1.41
UBR1-204ENST00000563239 SPP1P10451 314 aa6.22□□□□□ -1.41
UBR1-204ENST00000563239 SMCPP49901 116 aaPredicted RBP6.22□□□□□ -1.41
UBR1-204ENST00000563239 FGL1Q08830 312 aa6.22□□□□□ -1.41
UBR1-204ENST00000563239 SAMD13Q5VXD3 122 aa6.22□□□□□ -1.41
UBR1-204ENST00000563239 MORN3Q6PF18 240 aaPredicted RBP6.22□□□□□ -1.41
UBR1-204ENST00000563239 MIR17HGQ75NE6 70 aa6.22□□□□□ -1.41
UBR1-204ENST00000563239 S100A7AQ86SG5 101 aa6.22□□□□□ -1.41
UBR1-204ENST00000563239 BPIFA4PQ86YQ2 179 aa6.22□□□□□ -1.41
UBR1-204ENST00000563239 ZNF709Q8N972 641 aa6.22□□□□□ -1.41
UBR1-204ENST00000563239 OR2T35Q8NGX2 323 aa6.22□□□□□ -1.41
UBR1-204ENST00000563239 CLUHP3Q96NS8 147 aa6.22□□□□□ -1.41
UBR1-204ENST00000563239 PFDN5Q99471 154 aa6.22□□□□□ -1.41
UBR1-204ENST00000563239 HRH4Q9H3N8 390 aa6.22□□□□□ -1.41
UBR1-204ENST00000563239 ZNF331Q9NQX6 463 aaPredicted RBP6.22□□□□□ -1.41
UBR1-204ENST00000563239 PCLOQ9Y6V0 5065 aa6.21□□□□□ -1.42
UBR1-204ENST00000563239 SMLR1H3BR10 107 aa6.21□□□□□ -1.42
UBR1-204ENST00000563239 ZNF705DP0CH99 300 aaPredicted RBP6.21□□□□□ -1.42
UBR1-204ENST00000563239 ZNF705BP0CI00 300 aaPredicted RBP6.21□□□□□ -1.42
UBR1-204ENST00000563239 PRB4P10163 310 aaPredicted RBP6.21□□□□□ -1.42
UBR1-204ENST00000563239 FAM78BQ5VT40 261 aa6.21□□□□□ -1.42
UBR1-204ENST00000563239 AMTNQ6UX39 209 aa6.21□□□□□ -1.42
UBR1-204ENST00000563239 MUC7Q8TAX7 377 aa6.21□□□□□ -1.42
UBR1-204ENST00000563239 ZNF503Q96F45 646 aa6.21□□□□□ -1.42
UBR1-204ENST00000563239 SLC25A2Q9BXI2 301 aa6.21□□□□□ -1.42
UBR1-204ENST00000563239 RPRMQ9NS64 109 aa6.21□□□□□ -1.42
UBR1-204ENST00000563239 ZNF586Q9NXT0 402 aa6.21□□□□□ -1.42
UBR1-204ENST00000563239 CLEC5AQ9NY25 188 aa6.21□□□□□ -1.42
UBR1-204ENST00000563239 TMEM14CQ9P0S9 112 aa6.21□□□□□ -1.42
UBR1-204ENST00000563239 TNFSF18Q9UNG2 199 aa6.21□□□□□ -1.42
UBR1-204ENST00000563239 RNF24Q9Y225 148 aa6.21□□□□□ -1.42
UBR1-204ENST00000563239 A0A0J9YWU9 116 aa6.2□□□□□ -1.42
UBR1-204ENST00000563239 ZNF705FA8MVS1 300 aaPredicted RBP6.2□□□□□ -1.42
UBR1-204ENST00000563239 ZNF705EA8MWA4 302 aaPredicted RBP6.2□□□□□ -1.42
UBR1-204ENST00000563239 PRAC2D3DTV9 90 aa6.2□□□□□ -1.42
UBR1-204ENST00000563239 NDUFB4O95168 129 aa6.2□□□□□ -1.42
UBR1-204ENST00000563239 IFNA5P01569 189 aa6.2□□□□□ -1.42
UBR1-204ENST00000563239 IGKV3-20P01619 116 aa6.2□□□□□ -1.42
UBR1-204ENST00000563239 PYYP10082 97 aa6.2□□□□□ -1.42
UBR1-204ENST00000563239 CXCL2P19875 107 aa6.2□□□□□ -1.42
UBR1-204ENST00000563239 FXYD7P58549 80 aa6.2□□□□□ -1.42
UBR1-204ENST00000563239 PSG3Q16557 428 aa6.2□□□□□ -1.42
UBR1-204ENST00000563239 FFAR4Q5NUL3 377 aa6.2□□□□□ -1.42
UBR1-204ENST00000563239 LCN15Q6UWW0 184 aa6.2□□□□□ -1.42
UBR1-204ENST00000563239 OR11H2Q8NH07 326 aa6.2□□□□□ -1.42
UBR1-204ENST00000563239 SCGB1C1Q8TD33 95 aa6.2□□□□□ -1.42
UBR1-204ENST00000563239 RARRES2Q99969 163 aa6.2□□□□□ -1.42
UBR1-204ENST00000563239 SLC35B3Q9H1N7 401 aa6.2□□□□□ -1.42
UBR1-204ENST00000563239 X6R8D5 127 aa6.2□□□□□ -1.42
UBR1-204ENST00000563239 PLECQ15149 4684 aaKnown RBP6.2□□□□□ -1.42
UBR1-204ENST00000563239 TRBV19A0A075B6N1 114 aa6.19□□□□□ -1.42
UBR1-204ENST00000563239 FXYD6-FXYD2A0A087WZ82 144 aa6.19□□□□□ -1.42
UBR1-204ENST00000563239 C17orf112F2Z3M2 114 aa6.19□□□□□ -1.42
UBR1-204ENST00000563239 C3orf84H3BNL1 204 aa6.19□□□□□ -1.42
UBR1-204ENST00000563239 ZNF253O75346 499 aa6.19□□□□□ -1.42
UBR1-204ENST00000563239 EIF3GO75821 320 aaKnown RBP eCLIP6.19□□□□□ -1.42
UBR1-204ENST00000563239 HIST1H1EP10412 219 aaKnown RBP6.19□□□□□ -1.42
UBR1-204ENST00000563239 CNN1P51911 297 aaKnown RBP6.19□□□□□ -1.42
UBR1-204ENST00000563239 PSG9Q00887 426 aa6.19□□□□□ -1.42
UBR1-204ENST00000563239 TMEM41BQ5BJD5 291 aa6.19□□□□□ -1.42
UBR1-204ENST00000563239 CASC10Q5T4H9 136 aa6.19□□□□□ -1.42
UBR1-204ENST00000563239 EBLN2Q6P2I7 272 aa6.19□□□□□ -1.42
UBR1-204ENST00000563239 Q6ZNX1 250 aa6.19□□□□□ -1.42
UBR1-204ENST00000563239 Q8NAQ8 132 aa6.19□□□□□ -1.42
UBR1-204ENST00000563239 ZNF738Q8NE65 137 aa6.19□□□□□ -1.42
UBR1-204ENST00000563239 OR11H4Q8NGC9 324 aa6.19□□□□□ -1.42
UBR1-204ENST00000563239 OR4B1Q8NGF8 309 aa6.19□□□□□ -1.42
UBR1-204ENST00000563239 OR8A1Q8NGG7 326 aa6.19□□□□□ -1.42
UBR1-204ENST00000563239 RPUSD4Q96CM3 377 aaKnown RBP6.19□□□□□ -1.42
UBR1-204ENST00000563239 FXYD5Q96DB9 178 aa6.19□□□□□ -1.42
UBR1-204ENST00000563239 SLC50A1Q9BRV3 221 aa6.19□□□□□ -1.42
UBR1-204ENST00000563239 MRPL32Q9BYC8 188 aaKnown RBP6.19□□□□□ -1.42
UBR1-204ENST00000563239 KCNIP2Q9NS61 270 aa6.19□□□□□ -1.42
UBR1-204ENST00000563239 XCL2Q9UBD3 114 aa6.19□□□□□ -1.42
UBR1-204ENST00000563239 FUT9Q9Y231 359 aa6.19□□□□□ -1.42
UBR1-204ENST00000563239 TIMM9Q9Y5J7 89 aa6.19□□□□□ -1.42
UBR1-204ENST00000563239 SACSQ9NZJ4 4579 aa6.19□□□□□ -1.42
UBR1-204ENST00000563239 HYDINQ4G0P3 5121 aa6.19□□□□□ -1.42
UBR1-204ENST00000563239 DEFB4AO15263 64 aa6.18□□□□□ -1.42
UBR1-204ENST00000563239 CRXO43186 299 aaPredicted RBP6.18□□□□□ -1.42
UBR1-204ENST00000563239 DUSP14O95147 198 aaKnown RBP6.18□□□□□ -1.42
UBR1-204ENST00000563239 RBMY1A1P0DJD3 496 aaKnown RBP6.18□□□□□ -1.42
UBR1-204ENST00000563239 RBMY1CP0DJD4 496 aa6.18□□□□□ -1.42
UBR1-204ENST00000563239 ATP6V0CP27449 155 aa6.18□□□□□ -1.42
UBR1-204ENST00000563239 RAB2AP61019 212 aa6.18□□□□□ -1.42
UBR1-204ENST00000563239 RBMY1FQ15415 496 aaKnown RBP6.18□□□□□ -1.42
UBR1-204ENST00000563239 GUK1Q16774 197 aa6.18□□□□□ -1.42
UBR1-204ENST00000563239 RPL7L1Q6DKI1 246 aaKnown RBP6.18□□□□□ -1.42
UBR1-204ENST00000563239 ZNF705AQ6ZN79 300 aaPredicted RBP6.18□□□□□ -1.42
UBR1-204ENST00000563239 HSD17B11Q8NBQ5 300 aa6.18□□□□□ -1.42
UBR1-204ENST00000563239 INO80EQ8NBZ0 244 aaPredicted RBP6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms