RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 OR11H7Q8NGC8 314 aa3.56□□□□□ -1.84
SPG11-208ENST00000558155 ZFAND1Q8TCF1 268 aa3.56□□□□□ -1.84
SPG11-208ENST00000558155 GPR146Q96CH1 333 aa3.56□□□□□ -1.84
SPG11-208ENST00000558155 C20orf173Q96LM9 149 aa3.56□□□□□ -1.84
SPG11-208ENST00000558155 RSG1Q9BU20 258 aa3.56□□□□□ -1.84
SPG11-208ENST00000558155 NOP10Q9NPE3 64 aaKnown RBP3.56□□□□□ -1.84
SPG11-208ENST00000558155 COPZ2Q9P299 210 aa3.56□□□□□ -1.84
SPG11-208ENST00000558155 HERC1Q15751 4861 aa3.56□□□□□ -1.84
SPG11-208ENST00000558155 DNAH5Q8TE73 4624 aa3.55□□□□□ -1.84
SPG11-208ENST00000558155 F8W036 122 aa3.55□□□□□ -1.84
SPG11-208ENST00000558155 ZNF701M0R085 212 aaPredicted RBP3.55□□□□□ -1.84
SPG11-208ENST00000558155 CFDP00746 253 aaPredicted RBP3.55□□□□□ -1.84
SPG11-208ENST00000558155 PLA2G1BP04054 148 aaKnown RBP3.55□□□□□ -1.84
SPG11-208ENST00000558155 GPX4P36969 197 aaPredicted RBP3.55□□□□□ -1.84
SPG11-208ENST00000558155 TAGLN2P37802 199 aaKnown RBP3.55□□□□□ -1.84
SPG11-208ENST00000558155 CNN1P51911 297 aaKnown RBP3.55□□□□□ -1.84
SPG11-208ENST00000558155 AQP4P55087 323 aa3.55□□□□□ -1.84
SPG11-208ENST00000558155 LYZP61626 148 aa3.55□□□□□ -1.84
SPG11-208ENST00000558155 IL18Q14116 193 aa3.55□□□□□ -1.84
SPG11-208ENST00000558155 CNPY1Q3B7I2 92 aa3.55□□□□□ -1.84
SPG11-208ENST00000558155 SP6Q3SY56 376 aa3.55□□□□□ -1.84
SPG11-208ENST00000558155 UBE2NLQ5JXB2 153 aa3.55□□□□□ -1.84
SPG11-208ENST00000558155 GGNBP1Q5YKI7 109 aa3.55□□□□□ -1.84
SPG11-208ENST00000558155 CCDC71LQ8N9Z2 235 aa3.55□□□□□ -1.84
SPG11-208ENST00000558155 OR1B1Q8NGR6 318 aa3.55□□□□□ -1.84
SPG11-208ENST00000558155 GPX8Q8TED1 209 aa3.55□□□□□ -1.84
SPG11-208ENST00000558155 DEFB104AQ8WTQ1 72 aa3.55□□□□□ -1.84
SPG11-208ENST00000558155 TMEM263Q8WUH6 116 aaKnown RBP3.55□□□□□ -1.84
SPG11-208ENST00000558155 TP53RKQ96S44 253 aa3.55□□□□□ -1.84
SPG11-208ENST00000558155 TMEM70Q9BUB7 260 aa3.55□□□□□ -1.84
SPG11-208ENST00000558155 U3KQ87 197 aa3.55□□□□□ -1.84
SPG11-208ENST00000558155 TRAV12-2A0A075B6T6 113 aa3.54□□□□□ -1.84
SPG11-208ENST00000558155 GAGE12BA1L429 117 aa3.54□□□□□ -1.84
SPG11-208ENST00000558155 FAM25AB3EWG3 89 aa3.54□□□□□ -1.84
SPG11-208ENST00000558155 FAM25CB3EWG5 89 aa3.54□□□□□ -1.84
SPG11-208ENST00000558155 FAM25GB3EWG6 89 aa3.54□□□□□ -1.84
SPG11-208ENST00000558155 H7BYZ3 331 aa3.54□□□□□ -1.84
SPG11-208ENST00000558155 GAGE7O76087 117 aa3.54□□□□□ -1.84
SPG11-208ENST00000558155 CDS2O95674 445 aa3.54□□□□□ -1.84
SPG11-208ENST00000558155 SCGB1D1O95968 90 aa3.54□□□□□ -1.84
SPG11-208ENST00000558155 RLN2P04090 185 aa3.54□□□□□ -1.84
SPG11-208ENST00000558155 OR4E1P0C645 316 aa3.54□□□□□ -1.84
SPG11-208ENST00000558155 GAGE12FP0CL80 117 aa3.54□□□□□ -1.84
SPG11-208ENST00000558155 GAGE12GP0CL81 117 aa3.54□□□□□ -1.84
SPG11-208ENST00000558155 GAGE12IP0CL82 117 aa3.54□□□□□ -1.84
SPG11-208ENST00000558155 ELK1P19419 428 aa3.54□□□□□ -1.84
SPG11-208ENST00000558155 PI3P19957 117 aa3.54□□□□□ -1.84
SPG11-208ENST00000558155 CDKN1BP46527 198 aa3.54□□□□□ -1.84
SPG11-208ENST00000558155 BCAP31P51572 246 aa3.54□□□□□ -1.84
SPG11-208ENST00000558155 ZNF90Q03938 601 aa3.54□□□□□ -1.84
SPG11-208ENST00000558155 OR2F1Q13607 317 aa3.54□□□□□ -1.84
SPG11-208ENST00000558155 NMSQ5H8A3 153 aa3.54□□□□□ -1.84
SPG11-208ENST00000558155 BAP18Q8IXM2 172 aa3.54□□□□□ -1.84
SPG11-208ENST00000558155 LGI3Q8N145 548 aa3.54□□□□□ -1.84
SPG11-208ENST00000558155 ARRDC1Q8N5I2 433 aa3.54□□□□□ -1.84
SPG11-208ENST00000558155 LINC00612Q8N6U2 182 aa3.54□□□□□ -1.84
SPG11-208ENST00000558155 SAMD12Q8N8I0 201 aa3.54□□□□□ -1.84
SPG11-208ENST00000558155 OR4D5Q8NGN0 318 aa3.54□□□□□ -1.84
SPG11-208ENST00000558155 DTD1Q8TEA8 209 aa3.54□□□□□ -1.84
SPG11-208ENST00000558155 MITD1Q8WV92 249 aa3.54□□□□□ -1.84
SPG11-208ENST00000558155 SLC35E1Q96K37 410 aa3.54□□□□□ -1.84
SPG11-208ENST00000558155 CNBD2Q96M20 576 aa3.54□□□□□ -1.84
SPG11-208ENST00000558155 GPR82Q96P67 336 aa3.54□□□□□ -1.84
SPG11-208ENST00000558155 SLC25A39Q9BZJ4 359 aaPredicted RBP3.54□□□□□ -1.84
SPG11-208ENST00000558155 CACNG5Q9UF02 275 aa3.54□□□□□ -1.84
SPG11-208ENST00000558155 SLC45A2Q9UMX9 530 aa3.54□□□□□ -1.84
SPG11-208ENST00000558155 PLA2G2DQ9UNK4 145 aa3.54□□□□□ -1.84
SPG11-208ENST00000558155 TNFRSF18Q9Y5U5 241 aa3.54□□□□□ -1.84
SPG11-208ENST00000558155 A0A096LPF7 62 aa3.53□□□□□ -1.84
SPG11-208ENST00000558155 A0A0G2JRQ6 117 aa3.53□□□□□ -1.84
SPG11-208ENST00000558155 TEX13DA0A0J9YY54 714 aaPredicted RBP3.53□□□□□ -1.84
SPG11-208ENST00000558155 SNURFLB1AK76 121 aa3.53□□□□□ -1.84
SPG11-208ENST00000558155 NPIPB6E9PJ23 425 aa3.53□□□□□ -1.84
SPG11-208ENST00000558155 K7EP13 123 aa3.53□□□□□ -1.84
SPG11-208ENST00000558155 NXPH4O95158 308 aa3.53□□□□□ -1.84
SPG11-208ENST00000558155 TNFAIP8O95379 198 aa3.53□□□□□ -1.84
SPG11-208ENST00000558155 HOXA5P20719 270 aa3.53□□□□□ -1.84
SPG11-208ENST00000558155 S100PP25815 95 aa3.53□□□□□ -1.84
SPG11-208ENST00000558155 G0S2P27469 103 aa3.53□□□□□ -1.84
SPG11-208ENST00000558155 GABARAPL2P60520 117 aa3.53□□□□□ -1.84
SPG11-208ENST00000558155 FLI1Q01543 452 aaPredicted RBP3.53□□□□□ -1.84
SPG11-208ENST00000558155 HIST1H1AQ02539 215 aaPredicted RBP3.53□□□□□ -1.84
SPG11-208ENST00000558155 FGL1Q08830 312 aa3.53□□□□□ -1.84
SPG11-208ENST00000558155 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.53□□□□□ -1.84
SPG11-208ENST00000558155 TMED4Q7Z7H5 227 aa3.53□□□□□ -1.84
SPG11-208ENST00000558155 LHFPL1Q86WI0 220 aa3.53□□□□□ -1.84
SPG11-208ENST00000558155 SELENOHQ8IZQ5 122 aaKnown RBP3.53□□□□□ -1.84
SPG11-208ENST00000558155 ZNF738Q8NE65 137 aa3.53□□□□□ -1.84
SPG11-208ENST00000558155 OR8A1Q8NGG7 326 aa3.53□□□□□ -1.84
SPG11-208ENST00000558155 OR4D10Q8NGI6 311 aa3.53□□□□□ -1.84
SPG11-208ENST00000558155 TERB2Q8NHR7 220 aa3.53□□□□□ -1.84
SPG11-208ENST00000558155 LRRC20Q8TCA0 184 aa3.53□□□□□ -1.84
SPG11-208ENST00000558155 RNASE8Q8TDE3 154 aaKnown RBP3.53□□□□□ -1.84
SPG11-208ENST00000558155 NTN5Q8WTR8 489 aaPredicted RBP3.53□□□□□ -1.84
SPG11-208ENST00000558155 TMEM170AQ8WVE7 144 aa3.53□□□□□ -1.84
SPG11-208ENST00000558155 RBPMSQ93062 196 aaKnown RBP3.53□□□□□ -1.84
SPG11-208ENST00000558155 TRGV9Q99603 122 aa3.53□□□□□ -1.84
SPG11-208ENST00000558155 C20orf144Q9BQM9 153 aa3.53□□□□□ -1.84
SPG11-208ENST00000558155 TPPP3Q9BW30 176 aa3.53□□□□□ -1.84
SPG11-208ENST00000558155 TMEM222Q9H0R3 208 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms