RNA–Protein interactions for RNA: ENST00000557511.5

PSEN1-223, Transcript of presenilin 1, humanhuman

TSL 5 BASIC

Gene PSEN1, Length 1,230 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-223ENST00000557511 MBD2Q9UBB5 411 aa6.14□□□□□ -1.43
PSEN1-223ENST00000557511 HSPB11Q9Y547 144 aa6.14□□□□□ -1.43
PSEN1-223ENST00000557511 PXMP4Q9Y6I8 212 aa6.14□□□□□ -1.43
PSEN1-223ENST00000557511 H0YIZ8 118 aa6.13□□□□□ -1.43
PSEN1-223ENST00000557511 GIPP09681 153 aaPredicted RBP6.13□□□□□ -1.43
PSEN1-223ENST00000557511 HLA-DRB4P13762 266 aa6.13□□□□□ -1.43
PSEN1-223ENST00000557511 CXCL2P19875 107 aa6.13□□□□□ -1.43
PSEN1-223ENST00000557511 OPCMLQ14982 345 aa6.13□□□□□ -1.43
PSEN1-223ENST00000557511 FCN2Q15485 313 aa6.13□□□□□ -1.43
PSEN1-223ENST00000557511 LCN15Q6UWW0 184 aa6.13□□□□□ -1.43
PSEN1-223ENST00000557511 TRPT1Q86TN4 253 aaKnown RBP6.13□□□□□ -1.43
PSEN1-223ENST00000557511 INO80EQ8NBZ0 244 aaPredicted RBP6.13□□□□□ -1.43
PSEN1-223ENST00000557511 ZNF738Q8NE65 137 aa6.13□□□□□ -1.43
PSEN1-223ENST00000557511 CHAC2Q8WUX2 184 aa6.13□□□□□ -1.43
PSEN1-223ENST00000557511 SLC50A1Q9BRV3 221 aa6.13□□□□□ -1.43
PSEN1-223ENST00000557511 NPCDR1Q9BY65 106 aa6.13□□□□□ -1.43
PSEN1-223ENST00000557511 CLEC5AQ9NY25 188 aa6.13□□□□□ -1.43
PSEN1-223ENST00000557511 HLA-DRB4X5D2U9 266 aa6.13□□□□□ -1.43
PSEN1-223ENST00000557511 H3BMM0 161 aa6.12□□□□□ -1.43
PSEN1-223ENST00000557511 IGKV3-20P01619 116 aa6.12□□□□□ -1.43
PSEN1-223ENST00000557511 CXCL3P19876 107 aa6.12□□□□□ -1.43
PSEN1-223ENST00000557511 ZNF266Q14584 549 aa6.12□□□□□ -1.43
PSEN1-223ENST00000557511 GUK1Q16774 197 aa6.12□□□□□ -1.43
PSEN1-223ENST00000557511 KRTAP19-4Q3LI73 84 aa6.12□□□□□ -1.43
PSEN1-223ENST00000557511 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.12□□□□□ -1.43
PSEN1-223ENST00000557511 PATE2Q6UY27 113 aa6.12□□□□□ -1.43
PSEN1-223ENST00000557511 OR11H2Q8NH07 326 aa6.12□□□□□ -1.43
PSEN1-223ENST00000557511 RNF126Q9BV68 326 aa6.12□□□□□ -1.43
PSEN1-223ENST00000557511 SMIM3Q9BZL3 60 aa6.12□□□□□ -1.43
PSEN1-223ENST00000557511 WDR61Q9GZS3 305 aaKnown RBP6.12□□□□□ -1.43
PSEN1-223ENST00000557511 SAV1Q9H4B6 383 aaPredicted RBP6.12□□□□□ -1.43
PSEN1-223ENST00000557511 DNAH9Q9NYC9 4486 aa6.12□□□□□ -1.43
PSEN1-223ENST00000557511 A0A087X0K7 114 aa6.11□□□□□ -1.43
PSEN1-223ENST00000557511 AMBPP02760 352 aa6.11□□□□□ -1.43
PSEN1-223ENST00000557511 TAS2R45P59539 299 aa6.11□□□□□ -1.43
PSEN1-223ENST00000557511 RHOBP62745 196 aa6.11□□□□□ -1.43
PSEN1-223ENST00000557511 PSG9Q00887 426 aa6.11□□□□□ -1.43
PSEN1-223ENST00000557511 OXA1LQ15070 435 aa6.11□□□□□ -1.43
PSEN1-223ENST00000557511 FAM78BQ5VT40 261 aa6.11□□□□□ -1.43
PSEN1-223ENST00000557511 OR11H7Q8NGC8 314 aa6.11□□□□□ -1.43
PSEN1-223ENST00000557511 TMEM37Q8WXS4 190 aa6.11□□□□□ -1.43
PSEN1-223ENST00000557511 MRPL32Q9BYC8 188 aaKnown RBP6.11□□□□□ -1.43
PSEN1-223ENST00000557511 EDA2RQ9HAV5 297 aa6.11□□□□□ -1.43
PSEN1-223ENST00000557511 TIMM9Q9Y5J7 89 aa6.11□□□□□ -1.43
PSEN1-223ENST00000557511 FXYD6-FXYD2A0A087WZ82 144 aa6.1□□□□□ -1.43
PSEN1-223ENST00000557511 BORCS7-ASMTA0A0B4J1R7 106 aa6.1□□□□□ -1.43
PSEN1-223ENST00000557511 A0A0J9YWU9 116 aa6.1□□□□□ -1.43
PSEN1-223ENST00000557511 A0A0J9YX75 114 aa6.1□□□□□ -1.43
PSEN1-223ENST00000557511 SOCS3O14543 225 aa6.1□□□□□ -1.43
PSEN1-223ENST00000557511 HIST1H1AQ02539 215 aaPredicted RBP6.1□□□□□ -1.43
PSEN1-223ENST00000557511 PSG3Q16557 428 aa6.1□□□□□ -1.43
PSEN1-223ENST00000557511 ACOT6Q3I5F7 207 aaPredicted RBP6.1□□□□□ -1.43
PSEN1-223ENST00000557511 FFAR4Q5NUL3 377 aa6.1□□□□□ -1.43
PSEN1-223ENST00000557511 ZFAND6Q6FIF0 208 aa6.1□□□□□ -1.43
PSEN1-223ENST00000557511 OR2T35Q8NGX2 323 aa6.1□□□□□ -1.43
PSEN1-223ENST00000557511 OR10J6PQ8NGY7 276 aa6.1□□□□□ -1.43
PSEN1-223ENST00000557511 TMEM208Q9BTX3 173 aa6.1□□□□□ -1.43
PSEN1-223ENST00000557511 MFFQ9GZY8 342 aa6.1□□□□□ -1.43
PSEN1-223ENST00000557511 HRH4Q9H3N8 390 aa6.1□□□□□ -1.43
PSEN1-223ENST00000557511 AAMDCQ9H7C9 122 aa6.1□□□□□ -1.43
PSEN1-223ENST00000557511 XCL2Q9UBD3 114 aa6.1□□□□□ -1.43
PSEN1-223ENST00000557511 GOLT1BQ9Y3E0 138 aa6.1□□□□□ -1.43
PSEN1-223ENST00000557511 A0A1W2PPV4 95 aa6.09□□□□□ -1.43
PSEN1-223ENST00000557511 CXorf65A6NEN9 183 aa6.09□□□□□ -1.43
PSEN1-223ENST00000557511 OR7C2O60412 319 aa6.09□□□□□ -1.43
PSEN1-223ENST00000557511 HIST1H1EP10412 219 aaKnown RBP6.09□□□□□ -1.43
PSEN1-223ENST00000557511 MIFP14174 115 aa6.09□□□□□ -1.43
PSEN1-223ENST00000557511 RNF182Q8N6D2 247 aa6.09□□□□□ -1.43
PSEN1-223ENST00000557511 RPUSD4Q96CM3 377 aaKnown RBP6.09□□□□□ -1.43
PSEN1-223ENST00000557511 CLUHP3Q96NS8 147 aa6.09□□□□□ -1.43
PSEN1-223ENST00000557511 PARD6GQ9BYG4 376 aaPredicted RBP6.09□□□□□ -1.43
PSEN1-223ENST00000557511 ZNF331Q9NQX6 463 aaPredicted RBP6.09□□□□□ -1.43
PSEN1-223ENST00000557511 TMEM14CQ9P0S9 112 aa6.09□□□□□ -1.43
PSEN1-223ENST00000557511 FUT9Q9Y231 359 aa6.09□□□□□ -1.43
PSEN1-223ENST00000557511 IGHV3OR16-12A0A075B7B8 117 aa6.08□□□□□ -1.44
PSEN1-223ENST00000557511 TRAV5A0A0B4J249 113 aa6.08□□□□□ -1.44
PSEN1-223ENST00000557511 F6UB75 175 aa6.08□□□□□ -1.44
PSEN1-223ENST00000557511 H3BTX0 84 aa6.08□□□□□ -1.44
PSEN1-223ENST00000557511 ZNF253O75346 499 aa6.08□□□□□ -1.44
PSEN1-223ENST00000557511 INSP01308 110 aa6.08□□□□□ -1.44
PSEN1-223ENST00000557511 MBP02144 154 aa6.08□□□□□ -1.44
PSEN1-223ENST00000557511 SNRPCP09234 159 aaKnown RBP6.08□□□□□ -1.44
PSEN1-223ENST00000557511 C4BPBP20851 252 aa6.08□□□□□ -1.44
PSEN1-223ENST00000557511 TSPOP30536 169 aa6.08□□□□□ -1.44
PSEN1-223ENST00000557511 CNN1P51911 297 aaKnown RBP6.08□□□□□ -1.44
PSEN1-223ENST00000557511 FXYD7P58549 80 aa6.08□□□□□ -1.44
PSEN1-223ENST00000557511 PDE6HQ13956 83 aa6.08□□□□□ -1.44
PSEN1-223ENST00000557511 KHDC3LQ587J8 217 aa6.08□□□□□ -1.44
PSEN1-223ENST00000557511 CASC10Q5T4H9 136 aa6.08□□□□□ -1.44
PSEN1-223ENST00000557511 GDF5OSQ5U4N7 250 aa6.08□□□□□ -1.44
PSEN1-223ENST00000557511 IGFL4Q6B9Z1 124 aa6.08□□□□□ -1.44
PSEN1-223ENST00000557511 OR8A1Q8NGG7 326 aa6.08□□□□□ -1.44
PSEN1-223ENST00000557511 C11orf45Q8TAV5 145 aa6.08□□□□□ -1.44
PSEN1-223ENST00000557511 BLNKQ8WV28 456 aa6.08□□□□□ -1.44
PSEN1-223ENST00000557511 C20orf173Q96LM9 149 aa6.08□□□□□ -1.44
PSEN1-223ENST00000557511 AQP10Q96PS8 301 aa6.08□□□□□ -1.44
PSEN1-223ENST00000557511 PAXXQ9BUH6 204 aa6.08□□□□□ -1.44
PSEN1-223ENST00000557511 OR51M1Q9H341 326 aa6.08□□□□□ -1.44
PSEN1-223ENST00000557511 C11orf68Q9H3H3 251 aaKnown RBP6.08□□□□□ -1.44
PSEN1-223ENST00000557511 PRELID1Q9Y255 219 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms