RNA–Protein interactions for RNA: ENST00000557024.1

SYNE2-224, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 998 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-224ENST00000557024 BPIFCQ8NFQ6 507 aa6.76□□□□□ -1.33
SYNE2-224ENST00000557024 KRTAP4-12Q9BQ66 201 aa6.76□□□□□ -1.33
SYNE2-224ENST00000557024 WDR61Q9GZS3 305 aaKnown RBP6.76□□□□□ -1.33
SYNE2-224ENST00000557024 WFDC1Q9HC57 220 aa6.76□□□□□ -1.33
SYNE2-224ENST00000557024 KCNIP2Q9NS61 270 aa6.76□□□□□ -1.33
SYNE2-224ENST00000557024 MRPL36Q9P0J6 103 aaKnown RBP6.76□□□□□ -1.33
SYNE2-224ENST00000557024 WDR83OSQ9Y284 106 aa6.76□□□□□ -1.33
SYNE2-224ENST00000557024 TRAV10A0A0B4J240 114 aa6.75□□□□□ -1.33
SYNE2-224ENST00000557024 CDK2AP2O75956 126 aa6.75□□□□□ -1.33
SYNE2-224ENST00000557024 CFDP00746 253 aaPredicted RBP6.75□□□□□ -1.33
SYNE2-224ENST00000557024 IGLC1P0CG04 106 aa6.75□□□□□ -1.33
SYNE2-224ENST00000557024 RD3LP0DJH9 198 aa6.75□□□□□ -1.33
SYNE2-224ENST00000557024 P0DMU3 169 aa6.75□□□□□ -1.33
SYNE2-224ENST00000557024 FAM231AP0DMU4 169 aa6.75□□□□□ -1.33
SYNE2-224ENST00000557024 FAM231CP0DMU5 169 aa6.75□□□□□ -1.33
SYNE2-224ENST00000557024 S100A7P31151 101 aa6.75□□□□□ -1.33
SYNE2-224ENST00000557024 YPEL3P61236 119 aaPredicted RBP6.75□□□□□ -1.33
SYNE2-224ENST00000557024 SELENOTP62341 195 aa6.75□□□□□ -1.33
SYNE2-224ENST00000557024 LGALS9BQ3B8N2 356 aa6.75□□□□□ -1.33
SYNE2-224ENST00000557024 ZNF600Q6ZNG1 722 aa6.75□□□□□ -1.33
SYNE2-224ENST00000557024 Q6ZRG5 221 aa6.75□□□□□ -1.33
SYNE2-224ENST00000557024 SLC51BQ86UW2 128 aa6.75□□□□□ -1.33
SYNE2-224ENST00000557024 GNPNAT1Q96EK6 184 aaPredicted RBP6.75□□□□□ -1.33
SYNE2-224ENST00000557024 PARD6GQ9BYG4 376 aaPredicted RBP6.75□□□□□ -1.33
SYNE2-224ENST00000557024 HRH4Q9H3N8 390 aa6.75□□□□□ -1.33
SYNE2-224ENST00000557024 IGLV2-18A0A075B6J9 118 aa6.74□□□□□ -1.33
SYNE2-224ENST00000557024 IGHV3OR16-8A0A075B7F1 116 aa6.74□□□□□ -1.33
SYNE2-224ENST00000557024 C16orf90A8MZG2 172 aa6.74□□□□□ -1.33
SYNE2-224ENST00000557024 TOMM40O96008 361 aa6.74□□□□□ -1.33
SYNE2-224ENST00000557024 CTSGP08311 255 aa6.74□□□□□ -1.33
SYNE2-224ENST00000557024 RBMY1A1P0DJD3 496 aaKnown RBP6.74□□□□□ -1.33
SYNE2-224ENST00000557024 RBMY1CP0DJD4 496 aa6.74□□□□□ -1.33
SYNE2-224ENST00000557024 TFPI2P48307 235 aa6.74□□□□□ -1.33
SYNE2-224ENST00000557024 LYZP61626 148 aa6.74□□□□□ -1.33
SYNE2-224ENST00000557024 B2MP61769 119 aa6.74□□□□□ -1.33
SYNE2-224ENST00000557024 RBMY1FQ15415 496 aaKnown RBP6.74□□□□□ -1.33
SYNE2-224ENST00000557024 MIC13Q5XKP0 118 aa6.74□□□□□ -1.33
SYNE2-224ENST00000557024 EIF5AL1Q6IS14 154 aaKnown RBP6.74□□□□□ -1.33
SYNE2-224ENST00000557024 S100A7AQ86SG5 101 aa6.74□□□□□ -1.33
SYNE2-224ENST00000557024 BAP18Q8IXM2 172 aa6.74□□□□□ -1.33
SYNE2-224ENST00000557024 Q8NAQ8 132 aa6.74□□□□□ -1.33
SYNE2-224ENST00000557024 OR51G1Q8NGK1 321 aa6.74□□□□□ -1.33
SYNE2-224ENST00000557024 TMEM190Q8WZ59 177 aa6.74□□□□□ -1.33
SYNE2-224ENST00000557024 NARS2Q96I59 477 aaKnown RBP6.74□□□□□ -1.33
SYNE2-224ENST00000557024 MGST2Q99735 147 aa6.74□□□□□ -1.33
SYNE2-224ENST00000557024 RSG1Q9BU20 258 aa6.74□□□□□ -1.33
SYNE2-224ENST00000557024 CHRDL1Q9BU40 450 aa6.74□□□□□ -1.33
SYNE2-224ENST00000557024 C20orf24Q9BUV8 137 aa6.74□□□□□ -1.33
SYNE2-224ENST00000557024 PBDC1Q9BVG4 233 aa6.74□□□□□ -1.33
SYNE2-224ENST00000557024 NPCDR1Q9BY65 106 aa6.74□□□□□ -1.33
SYNE2-224ENST00000557024 DAZ1Q9NQZ3 744 aaKnown RBP6.74□□□□□ -1.33
SYNE2-224ENST00000557024 PUS1Q9Y606 427 aaKnown RBP eCLIP6.74□□□□□ -1.33
SYNE2-224ENST00000557024 PXMP4Q9Y6I8 212 aa6.74□□□□□ -1.33
SYNE2-224ENST00000557024 IGKV1D-37A0A075B6S9 117 aa6.73□□□□□ -1.33
SYNE2-224ENST00000557024 IGKV1OR2-108A0A075B7D4 117 aa6.73□□□□□ -1.33
SYNE2-224ENST00000557024 IGHV4-28A0A0C4DH34 117 aa6.73□□□□□ -1.33
SYNE2-224ENST00000557024 NDUFA4O00483 81 aa6.73□□□□□ -1.33
SYNE2-224ENST00000557024 ZNF207O43670 478 aaKnown RBP6.73□□□□□ -1.33
SYNE2-224ENST00000557024 COX7A2P2O60397 106 aa6.73□□□□□ -1.33
SYNE2-224ENST00000557024 IGKV1-17P01599 117 aa6.73□□□□□ -1.33
SYNE2-224ENST00000557024 AMBPP02760 352 aa6.73□□□□□ -1.33
SYNE2-224ENST00000557024 IL4P05112 153 aa6.73□□□□□ -1.33
SYNE2-224ENST00000557024 OR5G3P0C626 314 aa6.73□□□□□ -1.33
SYNE2-224ENST00000557024 LINC00869P0C866 280 aa6.73□□□□□ -1.33
SYNE2-224ENST00000557024 PSG1P11464 419 aa6.73□□□□□ -1.33
SYNE2-224ENST00000557024 ORM2P19652 201 aa6.73□□□□□ -1.33
SYNE2-224ENST00000557024 GATA2P23769 480 aaPredicted RBP6.73□□□□□ -1.33
SYNE2-224ENST00000557024 ATP6V0CP27449 155 aa6.73□□□□□ -1.33
SYNE2-224ENST00000557024 RPL29P47914 159 aaKnown RBP6.73□□□□□ -1.33
SYNE2-224ENST00000557024 ZNF90Q03938 601 aa6.73□□□□□ -1.33
SYNE2-224ENST00000557024 ACOT6Q3I5F7 207 aaPredicted RBP6.73□□□□□ -1.33
SYNE2-224ENST00000557024 FFAR4Q5NUL3 377 aa6.73□□□□□ -1.33
SYNE2-224ENST00000557024 AKR1C8PQ5T2L2 129 aa6.73□□□□□ -1.33
SYNE2-224ENST00000557024 Q8N1X5 172 aa6.73□□□□□ -1.33
SYNE2-224ENST00000557024 OR1L4Q8NGR5 311 aa6.73□□□□□ -1.33
SYNE2-224ENST00000557024 OR1B1Q8NGR6 318 aa6.73□□□□□ -1.33
SYNE2-224ENST00000557024 OR2G3Q8NGZ4 309 aa6.73□□□□□ -1.33
SYNE2-224ENST00000557024 GINS3Q9BRX5 216 aa6.73□□□□□ -1.33
SYNE2-224ENST00000557024 PSMG3Q9BT73 122 aaPredicted RBP6.73□□□□□ -1.33
SYNE2-224ENST00000557024 SLC25A32Q9H2D1 315 aa6.73□□□□□ -1.33
SYNE2-224ENST00000557024 CYTL1Q9NRR1 136 aa6.73□□□□□ -1.33
SYNE2-224ENST00000557024 SLC39A9Q9NUM3 307 aa6.73□□□□□ -1.33
SYNE2-224ENST00000557024 DOK5Q9P104 306 aa6.73□□□□□ -1.33
SYNE2-224ENST00000557024 TIMM9Q9Y5J7 89 aa6.73□□□□□ -1.33
SYNE2-224ENST00000557024 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.73□□□□□ -1.33
SYNE2-224ENST00000557024 IGKV3-7A0A075B6H7 116 aa6.72□□□□□ -1.33
SYNE2-224ENST00000557024 MBP02144 154 aa6.72□□□□□ -1.33
SYNE2-224ENST00000557024 SERF2P84101 59 aa6.72□□□□□ -1.33
SYNE2-224ENST00000557024 SOHLH1Q5JUK2 328 aa6.72□□□□□ -1.33
SYNE2-224ENST00000557024 PXDC1Q5TGL8 231 aa6.72□□□□□ -1.33
SYNE2-224ENST00000557024 Q6ZR54 194 aa6.72□□□□□ -1.33
SYNE2-224ENST00000557024 ZNF767PQ75MW2 155 aa6.72□□□□□ -1.33
SYNE2-224ENST00000557024 STOML3Q8TAV4 291 aa6.72□□□□□ -1.33
SYNE2-224ENST00000557024 ST8SIA2Q92186 375 aa6.72□□□□□ -1.33
SYNE2-224ENST00000557024 RNF125Q96EQ8 232 aa6.72□□□□□ -1.33
SYNE2-224ENST00000557024 METTL26Q96S19 204 aa6.72□□□□□ -1.33
SYNE2-224ENST00000557024 PFDN5Q99471 154 aa6.72□□□□□ -1.33
SYNE2-224ENST00000557024 SCRT1Q9BWW7 348 aa6.72□□□□□ -1.33
SYNE2-224ENST00000557024 SCRT2Q9NQ03 307 aa6.72□□□□□ -1.33
SYNE2-224ENST00000557024 RABAC1Q9UI14 185 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms