RNA–Protein interactions for RNA: ENST00000556980.5

XRCC3-217, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 801 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-217ENST00000556980 SLC39A9Q9NUM3 307 aa12.99□□□□□ -0.33
XRCC3-217ENST00000556980 OR5AC2Q9NZP5 309 aa12.99□□□□□ -0.33
XRCC3-217ENST00000556980 MRPS12O15235 138 aaKnown RBP12.98□□□□□ -0.33
XRCC3-217ENST00000556980 CXCL2P19875 107 aa12.98□□□□□ -0.33
XRCC3-217ENST00000556980 RPL29P47914 159 aaKnown RBP12.98□□□□□ -0.33
XRCC3-217ENST00000556980 CNN1P51911 297 aaKnown RBP12.98□□□□□ -0.33
XRCC3-217ENST00000556980 B2MP61769 119 aa12.98□□□□□ -0.33
XRCC3-217ENST00000556980 OPCMLQ14982 345 aa12.98□□□□□ -0.33
XRCC3-217ENST00000556980 MORN5Q5VZ52 161 aa12.98□□□□□ -0.33
XRCC3-217ENST00000556980 LCN15Q6UWW0 184 aa12.98□□□□□ -0.33
XRCC3-217ENST00000556980 GOLT1BQ9Y3E0 138 aa12.98□□□□□ -0.33
XRCC3-217ENST00000556980 DYNC2H1Q8NCM8 4307 aaKnown RBP12.98□□□□□ -0.33
XRCC3-217ENST00000556980 ZNF705FA8MVS1 300 aaPredicted RBP12.97□□□□□ -0.33
XRCC3-217ENST00000556980 MPDU1O75352 247 aa12.97□□□□□ -0.33
XRCC3-217ENST00000556980 ZNF705DP0CH99 300 aaPredicted RBP12.97□□□□□ -0.33
XRCC3-217ENST00000556980 ZNF705BP0CI00 300 aaPredicted RBP12.97□□□□□ -0.33
XRCC3-217ENST00000556980 PET100P0DJ07 73 aa12.97□□□□□ -0.33
XRCC3-217ENST00000556980 NHLH2Q02577 135 aa12.97□□□□□ -0.33
XRCC3-217ENST00000556980 OR5C1Q8NGR4 320 aa12.97□□□□□ -0.33
XRCC3-217ENST00000556980 CHAC2Q8WUX2 184 aa12.97□□□□□ -0.33
XRCC3-217ENST00000556980 PPP1R1CQ8WVI7 109 aa12.97□□□□□ -0.33
XRCC3-217ENST00000556980 LINC00476Q8WZB0 136 aa12.97□□□□□ -0.33
XRCC3-217ENST00000556980 NEU1Q99519 415 aa12.97□□□□□ -0.33
XRCC3-217ENST00000556980 PXMP4Q9Y6I8 212 aa12.97□□□□□ -0.33
XRCC3-217ENST00000556980 SMIM9A6NGZ8 99 aa12.96□□□□□ -0.33
XRCC3-217ENST00000556980 A8MTW9 85 aa12.96□□□□□ -0.33
XRCC3-217ENST00000556980 H0YIZ8 118 aa12.96□□□□□ -0.33
XRCC3-217ENST00000556980 AMBPP02760 352 aa12.96□□□□□ -0.33
XRCC3-217ENST00000556980 SNRPCP09234 159 aaKnown RBP12.96□□□□□ -0.33
XRCC3-217ENST00000556980 HLA-DMBP28068 263 aa12.96□□□□□ -0.33
XRCC3-217ENST00000556980 HIST1H1AQ02539 215 aaPredicted RBP12.96□□□□□ -0.33
XRCC3-217ENST00000556980 CLINT1Q14677 625 aa12.96□□□□□ -0.33
XRCC3-217ENST00000556980 PSG3Q16557 428 aa12.96□□□□□ -0.33
XRCC3-217ENST00000556980 AMTNQ6UX39 209 aa12.96□□□□□ -0.33
XRCC3-217ENST00000556980 THAP6Q8TBB0 222 aa12.96□□□□□ -0.33
XRCC3-217ENST00000556980 SLC50A1Q9BRV3 221 aa12.96□□□□□ -0.33
XRCC3-217ENST00000556980 NPCDR1Q9BY65 106 aa12.96□□□□□ -0.33
XRCC3-217ENST00000556980 C11orf94C9JXX5 98 aa12.95□□□□□ -0.34
XRCC3-217ENST00000556980 LY6G6CO95867 125 aa12.95□□□□□ -0.34
XRCC3-217ENST00000556980 OR11H7Q8NGC8 314 aa12.95□□□□□ -0.34
XRCC3-217ENST00000556980 C2CD4CQ8TF44 421 aa12.95□□□□□ -0.34
XRCC3-217ENST00000556980 RPUSD4Q96CM3 377 aaKnown RBP12.95□□□□□ -0.34
XRCC3-217ENST00000556980 TMEM208Q9BTX3 173 aa12.95□□□□□ -0.34
XRCC3-217ENST00000556980 ZNF331Q9NQX6 463 aaPredicted RBP12.95□□□□□ -0.34
XRCC3-217ENST00000556980 RFNGQ9Y644 331 aa12.95□□□□□ -0.34
XRCC3-217ENST00000556980 TRAV5A0A0B4J249 113 aa12.94□□□□□ -0.34
XRCC3-217ENST00000556980 TMEM189A5PLL7 270 aa12.94□□□□□ -0.34
XRCC3-217ENST00000556980 H3BTX0 84 aa12.94□□□□□ -0.34
XRCC3-217ENST00000556980 M0R2Z0 102 aa12.94□□□□□ -0.34
XRCC3-217ENST00000556980 PTTG1O95997 202 aa12.94□□□□□ -0.34
XRCC3-217ENST00000556980 IGLC2P0DOY2 106 aa12.94□□□□□ -0.34
XRCC3-217ENST00000556980 EMP1P54849 157 aa12.94□□□□□ -0.34
XRCC3-217ENST00000556980 RHOBP62745 196 aa12.94□□□□□ -0.34
XRCC3-217ENST00000556980 SPINK13Q1W4C9 94 aa12.94□□□□□ -0.34
XRCC3-217ENST00000556980 OR8A1Q8NGG7 326 aa12.94□□□□□ -0.34
XRCC3-217ENST00000556980 IGF2BP2-AS1Q96M15 143 aa12.94□□□□□ -0.34
XRCC3-217ENST00000556980 PPP1R14DQ9NXH3 145 aa12.94□□□□□ -0.34
XRCC3-217ENST00000556980 CELA1Q9UNI1 258 aa12.94□□□□□ -0.34
XRCC3-217ENST00000556980 BOLA2-SMG1P6H3BVE0 249 aa12.93□□□□□ -0.34
XRCC3-217ENST00000556980 SLC17A3O00476 420 aa12.93□□□□□ -0.34
XRCC3-217ENST00000556980 MPC2O95563 127 aa12.93□□□□□ -0.34
XRCC3-217ENST00000556980 INSP01308 110 aa12.93□□□□□ -0.34
XRCC3-217ENST00000556980 HBE1P02100 147 aa12.93□□□□□ -0.34
XRCC3-217ENST00000556980 GUK1Q16774 197 aa12.93□□□□□ -0.34
XRCC3-217ENST00000556980 Q6ZTC4 211 aa12.93□□□□□ -0.34
XRCC3-217ENST00000556980 C1orf158Q8N1D5 194 aa12.93□□□□□ -0.34
XRCC3-217ENST00000556980 KCNIP2Q9NS61 270 aa12.93□□□□□ -0.34
XRCC3-217ENST00000556980 TRAV10A0A0B4J240 114 aa12.92□□□□□ -0.34
XRCC3-217ENST00000556980 H3BQ15 152 aa12.92□□□□□ -0.34
XRCC3-217ENST00000556980 RNF126Q9BV68 326 aa12.92□□□□□ -0.34
XRCC3-217ENST00000556980 ALG5Q9Y673 324 aa12.92□□□□□ -0.34
XRCC3-217ENST00000556980 SPART-AS1P0CW21 52 aa12.91□□□□□ -0.34
XRCC3-217ENST00000556980 PRB4P10163 310 aaPredicted RBP12.91□□□□□ -0.34
XRCC3-217ENST00000556980 RRN3P1Q2M238 152 aa12.91□□□□□ -0.34
XRCC3-217ENST00000556980 ZNF767PQ75MW2 155 aa12.91□□□□□ -0.34
XRCC3-217ENST00000556980 BAP18Q8IXM2 172 aa12.91□□□□□ -0.34
XRCC3-217ENST00000556980 ATP5SQ99766 215 aa12.91□□□□□ -0.34
XRCC3-217ENST00000556980 WDR61Q9GZS3 305 aaKnown RBP12.91□□□□□ -0.34
XRCC3-217ENST00000556980 MBD2Q9UBB5 411 aa12.91□□□□□ -0.34
XRCC3-217ENST00000556980 SACSQ9NZJ4 4579 aa12.9□□□□□ -0.34
XRCC3-217ENST00000556980 LOC102723971A0A1B0GUV8 181 aa12.9□□□□□ -0.34
XRCC3-217ENST00000556980 IGLL5B9A064 214 aa12.9□□□□□ -0.34
XRCC3-217ENST00000556980 C12orf74Q32Q52 190 aa12.9□□□□□ -0.34
XRCC3-217ENST00000556980 GCSAMLQ5JQS6 135 aa12.9□□□□□ -0.34
XRCC3-217ENST00000556980 OR10J6PQ8NGY7 276 aa12.9□□□□□ -0.34
XRCC3-217ENST00000556980 TMEM14CQ9P0S9 112 aa12.9□□□□□ -0.34
XRCC3-217ENST00000556980 HSPB11Q9Y547 144 aa12.9□□□□□ -0.34
XRCC3-217ENST00000556980 TRAV12-2A0A075B6T6 113 aa12.89□□□□□ -0.35
XRCC3-217ENST00000556980 TEX48A0A1B0GUV7 120 aa12.89□□□□□ -0.35
XRCC3-217ENST00000556980 C17orf112F2Z3M2 114 aa12.89□□□□□ -0.35
XRCC3-217ENST00000556980 CRXO43186 299 aaPredicted RBP12.89□□□□□ -0.35
XRCC3-217ENST00000556980 RPL12P30050 165 aaKnown RBP12.89□□□□□ -0.35
XRCC3-217ENST00000556980 TCTAP57738 103 aa12.89□□□□□ -0.35
XRCC3-217ENST00000556980 SAT2Q96F10 170 aaPredicted RBP12.89□□□□□ -0.35
XRCC3-217ENST00000556980 ZNF586Q9NXT0 402 aa12.89□□□□□ -0.35
XRCC3-217ENST00000556980 DEFB131BA0A096LNP1 70 aa12.88□□□□□ -0.35
XRCC3-217ENST00000556980 ZNF253O75346 499 aa12.88□□□□□ -0.35
XRCC3-217ENST00000556980 SMIM3Q9BZL3 60 aa12.88□□□□□ -0.35
XRCC3-217ENST00000556980 TIMM9Q9Y5J7 89 aa12.88□□□□□ -0.35
XRCC3-217ENST00000556980 TRBV19A0A075B6N1 114 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 337.7 ms