RNA–Protein interactions for RNA: ENST00000556897.5

HNRNPC-227, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,252 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-227ENST00000556897 ATP5IP56385 69 aaPredicted RBP6.23□□□□□ -1.41
HNRNPC-227ENST00000556897 LINC00315P59091 139 aa6.23□□□□□ -1.41
HNRNPC-227ENST00000556897 RHOBP62745 196 aa6.23□□□□□ -1.41
HNRNPC-227ENST00000556897 HIST1H1AQ02539 215 aaPredicted RBP6.23□□□□□ -1.41
HNRNPC-227ENST00000556897 GGNBP1Q5YKI7 109 aa6.23□□□□□ -1.41
HNRNPC-227ENST00000556897 MZT2AQ6P582 158 aa6.23□□□□□ -1.41
HNRNPC-227ENST00000556897 LYZL2Q7Z4W2 148 aa6.23□□□□□ -1.41
HNRNPC-227ENST00000556897 TMEM256Q8N2U0 113 aa6.23□□□□□ -1.41
HNRNPC-227ENST00000556897 THAP8Q8NA92 274 aa6.23□□□□□ -1.41
HNRNPC-227ENST00000556897 ZNF738Q8NE65 137 aa6.23□□□□□ -1.41
HNRNPC-227ENST00000556897 OR4D5Q8NGN0 318 aa6.23□□□□□ -1.41
HNRNPC-227ENST00000556897 OR1B1Q8NGR6 318 aa6.23□□□□□ -1.41
HNRNPC-227ENST00000556897 RNASE8Q8TDE3 154 aaKnown RBP6.23□□□□□ -1.41
HNRNPC-227ENST00000556897 RXFP4Q8TDU9 374 aa6.23□□□□□ -1.41
HNRNPC-227ENST00000556897 IL22RA2Q969J5 263 aa6.23□□□□□ -1.41
HNRNPC-227ENST00000556897 ZNF503Q96F45 646 aa6.23□□□□□ -1.41
HNRNPC-227ENST00000556897 FUNDC2Q9BWH2 189 aa6.23□□□□□ -1.41
HNRNPC-227ENST00000556897 GPR132Q9UNW8 380 aa6.23□□□□□ -1.41
HNRNPC-227ENST00000556897 A0A0B4J2A0 478 aa6.22□□□□□ -1.41
HNRNPC-227ENST00000556897 DISC1C4P0D8 188 aa6.22□□□□□ -1.41
HNRNPC-227ENST00000556897 PTTG1O95997 202 aa6.22□□□□□ -1.41
HNRNPC-227ENST00000556897 CFDP00746 253 aaPredicted RBP6.22□□□□□ -1.41
HNRNPC-227ENST00000556897 TMEM182Q6ZP80 229 aaPredicted RBP6.22□□□□□ -1.41
HNRNPC-227ENST00000556897 Q6ZRN7 208 aaPredicted RBP6.22□□□□□ -1.41
HNRNPC-227ENST00000556897 CLRN3Q8NCR9 226 aa6.22□□□□□ -1.41
HNRNPC-227ENST00000556897 OR8A1Q8NGG7 326 aa6.22□□□□□ -1.41
HNRNPC-227ENST00000556897 OR10J6PQ8NGY7 276 aa6.22□□□□□ -1.41
HNRNPC-227ENST00000556897 OR1S1Q8NH92 325 aa6.22□□□□□ -1.41
HNRNPC-227ENST00000556897 TMEM263Q8WUH6 116 aaKnown RBP6.22□□□□□ -1.41
HNRNPC-227ENST00000556897 AP3S1Q92572 193 aa6.22□□□□□ -1.41
HNRNPC-227ENST00000556897 FRZBQ92765 325 aa6.22□□□□□ -1.41
HNRNPC-227ENST00000556897 GPR82Q96P67 336 aa6.22□□□□□ -1.41
HNRNPC-227ENST00000556897 TMEM147Q9BVK8 224 aa6.22□□□□□ -1.41
HNRNPC-227ENST00000556897 PPP1R14DQ9NXH3 145 aa6.22□□□□□ -1.41
HNRNPC-227ENST00000556897 SHPKQ9UHJ6 478 aa6.22□□□□□ -1.41
HNRNPC-227ENST00000556897 SLC45A2Q9UMX9 530 aa6.22□□□□□ -1.41
HNRNPC-227ENST00000556897 MRPS16Q9Y3D3 137 aaKnown RBP6.22□□□□□ -1.41
HNRNPC-227ENST00000556897 SRRM2Q9UQ35 2752 aaKnown RBP6.21□□□□□ -1.42
HNRNPC-227ENST00000556897 GAGE12BA1L429 117 aa6.21□□□□□ -1.42
HNRNPC-227ENST00000556897 GAGE7O76087 117 aa6.21□□□□□ -1.42
HNRNPC-227ENST00000556897 GAGE12FP0CL80 117 aa6.21□□□□□ -1.42
HNRNPC-227ENST00000556897 GAGE12GP0CL81 117 aa6.21□□□□□ -1.42
HNRNPC-227ENST00000556897 GAGE12IP0CL82 117 aa6.21□□□□□ -1.42
HNRNPC-227ENST00000556897 IAPPP10997 89 aa6.21□□□□□ -1.42
HNRNPC-227ENST00000556897 RAB11AP62491 216 aa6.21□□□□□ -1.42
HNRNPC-227ENST00000556897 ZNF493Q6ZR52 646 aa6.21□□□□□ -1.42
HNRNPC-227ENST00000556897 LINC00612Q8N6U2 182 aa6.21□□□□□ -1.42
HNRNPC-227ENST00000556897 BPIFCQ8NFQ6 507 aa6.21□□□□□ -1.42
HNRNPC-227ENST00000556897 OR51S1Q8NGJ8 323 aa6.21□□□□□ -1.42
HNRNPC-227ENST00000556897 C15orf40Q8WUR7 153 aa6.21□□□□□ -1.42
HNRNPC-227ENST00000556897 KCNIP3Q9Y2W7 256 aa6.21□□□□□ -1.42
HNRNPC-227ENST00000556897 H7BYZ3 331 aa6.2□□□□□ -1.42
HNRNPC-227ENST00000556897 AKR1C4P17516 323 aa6.2□□□□□ -1.42
HNRNPC-227ENST00000556897 CXCL3P19876 107 aa6.2□□□□□ -1.42
HNRNPC-227ENST00000556897 CDKN1BP46527 198 aa6.2□□□□□ -1.42
HNRNPC-227ENST00000556897 KRTAP10-1P60331 282 aa6.2□□□□□ -1.42
HNRNPC-227ENST00000556897 S100A12P80511 92 aa6.2□□□□□ -1.42
HNRNPC-227ENST00000556897 SSBP1Q04837 148 aaKnown RBP6.2□□□□□ -1.42
HNRNPC-227ENST00000556897 KIR3DS1Q14943 382 aa6.2□□□□□ -1.42
HNRNPC-227ENST00000556897 PRRT1Q99946 306 aa6.2□□□□□ -1.42
HNRNPC-227ENST00000556897 PRSS46E5RG02 174 aa6.19□□□□□ -1.42
HNRNPC-227ENST00000556897 H3BNG1 76 aa6.19□□□□□ -1.42
HNRNPC-227ENST00000556897 H3BRN7 92 aa6.19□□□□□ -1.42
HNRNPC-227ENST00000556897 PITX3O75364 302 aa6.19□□□□□ -1.42
HNRNPC-227ENST00000556897 ADAP1O75689 374 aa6.19□□□□□ -1.42
HNRNPC-227ENST00000556897 SMR3BP02814 79 aaPredicted RBP6.19□□□□□ -1.42
HNRNPC-227ENST00000556897 RLN2P04090 185 aa6.19□□□□□ -1.42
HNRNPC-227ENST00000556897 AKAIN1P0CW23 69 aa6.19□□□□□ -1.42
HNRNPC-227ENST00000556897 RPL7P18124 248 aaKnown RBP6.19□□□□□ -1.42
HNRNPC-227ENST00000556897 S100A7P31151 101 aa6.19□□□□□ -1.42
HNRNPC-227ENST00000556897 ERVFC1-1P60608 527 aa6.19□□□□□ -1.42
HNRNPC-227ENST00000556897 AKR1C1Q04828 323 aa6.19□□□□□ -1.42
HNRNPC-227ENST00000556897 CD300CQ08708 224 aa6.19□□□□□ -1.42
HNRNPC-227ENST00000556897 PSG3Q16557 428 aa6.19□□□□□ -1.42
HNRNPC-227ENST00000556897 LINC00469Q8N7U9 141 aa6.19□□□□□ -1.42
HNRNPC-227ENST00000556897 SVIPQ8NHG7 77 aa6.19□□□□□ -1.42
HNRNPC-227ENST00000556897 SMIM4Q8WVI0 70 aa6.19□□□□□ -1.42
HNRNPC-227ENST00000556897 RPUSD4Q96CM3 377 aaKnown RBP6.19□□□□□ -1.42
HNRNPC-227ENST00000556897 SHANK2-AS3Q9BTD1 123 aa6.19□□□□□ -1.42
HNRNPC-227ENST00000556897 TMPRSS5Q9H3S3 457 aa6.19□□□□□ -1.42
HNRNPC-227ENST00000556897 MDFICQ9P1T7 246 aa6.19□□□□□ -1.42
HNRNPC-227ENST00000556897 TNFRSF18Q9Y5U5 241 aa6.19□□□□□ -1.42
HNRNPC-227ENST00000556897 A0A096LPF7 62 aa6.18□□□□□ -1.42
HNRNPC-227ENST00000556897 DNAH10OSP0CZ25 163 aa6.18□□□□□ -1.42
HNRNPC-227ENST00000556897 ANXA3P12429 323 aa6.18□□□□□ -1.42
HNRNPC-227ENST00000556897 RAP2BP61225 183 aa6.18□□□□□ -1.42
HNRNPC-227ENST00000556897 SRPXP78539 464 aa6.18□□□□□ -1.42
HNRNPC-227ENST00000556897 MRPS10P82664 201 aaKnown RBP6.18□□□□□ -1.42
HNRNPC-227ENST00000556897 LRRC20Q8TCA0 184 aa6.18□□□□□ -1.42
HNRNPC-227ENST00000556897 VSIG2Q96IQ7 327 aa6.18□□□□□ -1.42
HNRNPC-227ENST00000556897 C18orf15Q96N68 181 aa6.18□□□□□ -1.42
HNRNPC-227ENST00000556897 PARD6GQ9BYG4 376 aaPredicted RBP6.18□□□□□ -1.42
HNRNPC-227ENST00000556897 NAA50Q9GZZ1 169 aaKnown RBP6.18□□□□□ -1.42
HNRNPC-227ENST00000556897 MIXL1Q9H2W2 232 aa6.18□□□□□ -1.42
HNRNPC-227ENST00000556897 AP5S1Q9NUS5 200 aa6.18□□□□□ -1.42
HNRNPC-227ENST00000556897 HIGD1AQ9Y241 93 aa6.18□□□□□ -1.42
HNRNPC-227ENST00000556897 VPS13BQ7Z7G8 4022 aa6.18□□□□□ -1.42
HNRNPC-227ENST00000556897 A0A087X0K7 114 aa6.17□□□□□ -1.42
HNRNPC-227ENST00000556897 CENPXA8MT69 81 aa6.17□□□□□ -1.42
HNRNPC-227ENST00000556897 SNURFLB1AK76 121 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms