RNA–Protein interactions for RNA: ENST00000556876.1

CHGA-206, Transcript of chromogranin A, humanhuman

TSL 2

Gene CHGA, Length 912 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-206ENST00000556876 OR10J6PQ8NGY7 276 aa12.09□□□□□ -0.47
CHGA-206ENST00000556876 V9GYH0 126 aa12.09□□□□□ -0.47
CHGA-206ENST00000556876 CENPXA8MT69 81 aa12.08□□□□□ -0.48
CHGA-206ENST00000556876 CDKN1BP46527 198 aa12.08□□□□□ -0.48
CHGA-206ENST00000556876 LCN15Q6UWW0 184 aa12.08□□□□□ -0.48
CHGA-206ENST00000556876 ZNF546Q86UE3 836 aa12.08□□□□□ -0.48
CHGA-206ENST00000556876 CCDC190Q86UF4 302 aa12.08□□□□□ -0.48
CHGA-206ENST00000556876 RNF182Q8N6D2 247 aa12.08□□□□□ -0.48
CHGA-206ENST00000556876 SLC50A1Q9BRV3 221 aa12.08□□□□□ -0.48
CHGA-206ENST00000556876 PKD1P98161 4303 aa12.07□□□□□ -0.48
CHGA-206ENST00000556876 H7BYZ3 331 aa12.07□□□□□ -0.48
CHGA-206ENST00000556876 GOSR2O14653 212 aa12.07□□□□□ -0.48
CHGA-206ENST00000556876 TSC22D2O75157 780 aa12.07□□□□□ -0.48
CHGA-206ENST00000556876 CCDC28AQ8IWP9 274 aa12.07□□□□□ -0.48
CHGA-206ENST00000556876 ARL6Q9H0F7 186 aa12.07□□□□□ -0.48
CHGA-206ENST00000556876 NBDYA0A0U1RRE5 68 aa12.06□□□□□ -0.48
CHGA-206ENST00000556876 SSSCA1O60232 199 aa12.06□□□□□ -0.48
CHGA-206ENST00000556876 NDUFB6O95139 128 aa12.06□□□□□ -0.48
CHGA-206ENST00000556876 NUDT3O95989 172 aa12.06□□□□□ -0.48
CHGA-206ENST00000556876 RAB31Q13636 194 aa12.06□□□□□ -0.48
CHGA-206ENST00000556876 CLINT1Q14677 625 aa12.06□□□□□ -0.48
CHGA-206ENST00000556876 TRIQKQ629K1 86 aa12.06□□□□□ -0.48
CHGA-206ENST00000556876 IGFL4Q6B9Z1 124 aa12.06□□□□□ -0.48
CHGA-206ENST00000556876 TMEM14EPQ6UXP3 125 aa12.06□□□□□ -0.48
CHGA-206ENST00000556876 BPIFA4PQ86YQ2 179 aa12.06□□□□□ -0.48
CHGA-206ENST00000556876 BAP18Q8IXM2 172 aa12.06□□□□□ -0.48
CHGA-206ENST00000556876 C6orf223Q8N319 242 aa12.06□□□□□ -0.48
CHGA-206ENST00000556876 TMEM263Q8WUH6 116 aaKnown RBP12.06□□□□□ -0.48
CHGA-206ENST00000556876 RPUSD4Q96CM3 377 aaKnown RBP12.06□□□□□ -0.48
CHGA-206ENST00000556876 ZNF503Q96F45 646 aa12.06□□□□□ -0.48
CHGA-206ENST00000556876 ARV1Q9H2C2 271 aa12.06□□□□□ -0.48
CHGA-206ENST00000556876 TRAV12-2A0A075B6T6 113 aa12.05□□□□□ -0.48
CHGA-206ENST00000556876 PMS2P5A8MQ11 134 aa12.05□□□□□ -0.48
CHGA-206ENST00000556876 OR4E1P0C645 316 aa12.05□□□□□ -0.48
CHGA-206ENST00000556876 BTF3P20290 206 aaKnown RBP12.05□□□□□ -0.48
CHGA-206ENST00000556876 ZNRF2Q8NHG8 242 aa12.05□□□□□ -0.48
CHGA-206ENST00000556876 CCDC160A6NGH7 325 aa12.04□□□□□ -0.48
CHGA-206ENST00000556876 AZU1P20160 251 aa12.04□□□□□ -0.48
CHGA-206ENST00000556876 TTC32Q5I0X7 151 aa12.04□□□□□ -0.48
CHGA-206ENST00000556876 UHRF2Q96PU4 802 aa12.04□□□□□ -0.48
CHGA-206ENST00000556876 ZNF331Q9NQX6 463 aaPredicted RBP12.04□□□□□ -0.48
CHGA-206ENST00000556876 PXMP4Q9Y6I8 212 aa12.04□□□□□ -0.48
CHGA-206ENST00000556876 PLAC8L1A1L4L8 177 aa12.03□□□□□ -0.48
CHGA-206ENST00000556876 ZNF701M0R085 212 aaPredicted RBP12.03□□□□□ -0.48
CHGA-206ENST00000556876 METTL15P1P0C7V9 234 aa12.03□□□□□ -0.48
CHGA-206ENST00000556876 HTN1P15515 57 aa12.03□□□□□ -0.48
CHGA-206ENST00000556876 RRAS2P62070 204 aaPredicted RBP12.03□□□□□ -0.48
CHGA-206ENST00000556876 GUK1Q16774 197 aa12.03□□□□□ -0.48
CHGA-206ENST00000556876 IAH1Q2TAA2 248 aaPredicted RBP12.03□□□□□ -0.48
CHGA-206ENST00000556876 LINC00305Q7Z4B0 112 aa12.03□□□□□ -0.48
CHGA-206ENST00000556876 H3BNG1 76 aa12.02□□□□□ -0.49
CHGA-206ENST00000556876 COX7A2P2O60397 106 aa12.02□□□□□ -0.49
CHGA-206ENST00000556876 CDK2AP2O75956 126 aa12.02□□□□□ -0.49
CHGA-206ENST00000556876 Q6ZRG5 221 aa12.02□□□□□ -0.49
CHGA-206ENST00000556876 RNASE8Q8TDE3 154 aaKnown RBP12.02□□□□□ -0.49
CHGA-206ENST00000556876 SRRQ9GZT4 340 aa12.02□□□□□ -0.49
CHGA-206ENST00000556876 NOP10Q9NPE3 64 aaKnown RBP12.02□□□□□ -0.49
CHGA-206ENST00000556876 C16orf90A8MZG2 172 aa12.01□□□□□ -0.49
CHGA-206ENST00000556876 M6PRP20645 277 aa12.01□□□□□ -0.49
CHGA-206ENST00000556876 PATE2Q6UY27 113 aa12.01□□□□□ -0.49
CHGA-206ENST00000556876 GNPNAT1Q96EK6 184 aaPredicted RBP12.01□□□□□ -0.49
CHGA-206ENST00000556876 ODF3Q96PU9 254 aa12.01□□□□□ -0.49
CHGA-206ENST00000556876 GSKIPQ9P0R6 139 aa12.01□□□□□ -0.49
CHGA-206ENST00000556876 SNURFLB1AK76 121 aa12□□□□□ -0.49
CHGA-206ENST00000556876 AGPAT2O15120 278 aa12□□□□□ -0.49
CHGA-206ENST00000556876 MRPS12O15235 138 aaKnown RBP12□□□□□ -0.49
CHGA-206ENST00000556876 SCGB1D2O95969 90 aa12□□□□□ -0.49
CHGA-206ENST00000556876 RLN2P04090 185 aa12□□□□□ -0.49
CHGA-206ENST00000556876 PRM2P04554 102 aa12□□□□□ -0.49
CHGA-206ENST00000556876 SLC38A11Q08AI6 406 aa12□□□□□ -0.49
CHGA-206ENST00000556876 ZNF846Q147U1 533 aa12□□□□□ -0.49
CHGA-206ENST00000556876 FCN2Q15485 313 aa12□□□□□ -0.49
CHGA-206ENST00000556876 C12orf45Q8N5I9 185 aaPredicted RBP12□□□□□ -0.49
CHGA-206ENST00000556876 RXFP4Q8TDU9 374 aa12□□□□□ -0.49
CHGA-206ENST00000556876 MITD1Q8WV92 249 aa12□□□□□ -0.49
CHGA-206ENST00000556876 RNF141Q8WVD5 230 aa12□□□□□ -0.49
CHGA-206ENST00000556876 Q9H8V8 135 aa12□□□□□ -0.49
CHGA-206ENST00000556876 DNAJC4Q9NNZ3 241 aa12□□□□□ -0.49
CHGA-206ENST00000556876 LINC00588Q9Y4M8 146 aa12□□□□□ -0.49
CHGA-206ENST00000556876 A0A1W2PPQ1 181 aa11.99□□□□□ -0.49
CHGA-206ENST00000556876 L7N2F9 121 aa11.99□□□□□ -0.49
CHGA-206ENST00000556876 LEPP41159 167 aa11.99□□□□□ -0.49
CHGA-206ENST00000556876 VAMP2P63027 116 aa11.99□□□□□ -0.49
CHGA-206ENST00000556876 OR5I1Q13606 314 aa11.99□□□□□ -0.49
CHGA-206ENST00000556876 C10orf113Q5VZT2 155 aa11.99□□□□□ -0.49
CHGA-206ENST00000556876 SSX7Q7RTT5 188 aa11.99□□□□□ -0.49
CHGA-206ENST00000556876 ZNF575Q86XF7 245 aa11.99□□□□□ -0.49
CHGA-206ENST00000556876 ZBTB8BQ8NAP8 495 aaPredicted RBP11.99□□□□□ -0.49
CHGA-206ENST00000556876 OR1L4Q8NGR5 311 aa11.99□□□□□ -0.49
CHGA-206ENST00000556876 PFDN5Q99471 154 aa11.99□□□□□ -0.49
CHGA-206ENST00000556876 PYGO2Q9BRQ0 406 aa11.99□□□□□ -0.49
CHGA-206ENST00000556876 MUC4Q99102 2169 aa11.98□□□□□ -0.49
CHGA-206ENST00000556876 TNP2Q05952 138 aa11.98□□□□□ -0.49
CHGA-206ENST00000556876 LINC00612Q8N6U2 182 aa11.98□□□□□ -0.49
CHGA-206ENST00000556876 C7orf66A4D0T2 115 aa11.97□□□□□ -0.49
CHGA-206ENST00000556876 ZNF253O75346 499 aa11.97□□□□□ -0.49
CHGA-206ENST00000556876 PVALBP20472 110 aaPredicted RBP11.97□□□□□ -0.49
CHGA-206ENST00000556876 CAMLGP49069 296 aa11.97□□□□□ -0.49
CHGA-206ENST00000556876 DAZ2Q13117 558 aaKnown RBP11.97□□□□□ -0.49
CHGA-206ENST00000556876 MRPL53Q96EL3 112 aaKnown RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms