RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 EBLN2Q6P2I7 272 aa12.09□□□□□ -0.47
ARHGEF40-207ENST00000556399 CNTFRP26992 372 aa12.09□□□□□ -0.47
ARHGEF40-207ENST00000556399 SFTA2Q6UW10 78 aa12.09□□□□□ -0.47
ARHGEF40-207ENST00000556399 SMPXQ9UHP9 88 aa12.09□□□□□ -0.47
ARHGEF40-207ENST00000556399 NUP210LQ5VU65 1888 aa12.09□□□□□ -0.47
ARHGEF40-207ENST00000556399 KMT2EQ8IZD2 1858 aa12.09□□□□□ -0.47
ARHGEF40-207ENST00000556399 TMEM213A2RRL7 107 aa12.08□□□□□ -0.47
ARHGEF40-207ENST00000556399 RNF5Q99942 180 aa12.08□□□□□ -0.47
ARHGEF40-207ENST00000556399 TPSG1Q9NRR2 321 aa12.08□□□□□ -0.47
ARHGEF40-207ENST00000556399 IGHV3OR16-10A0A075B7F0 116 aa12.08□□□□□ -0.48
ARHGEF40-207ENST00000556399 IGFL4Q6B9Z1 124 aa12.08□□□□□ -0.48
ARHGEF40-207ENST00000556399 VKORC1Q9BQB6 163 aa12.08□□□□□ -0.48
ARHGEF40-207ENST00000556399 RHOGP84095 191 aa12.08□□□□□ -0.48
ARHGEF40-207ENST00000556399 ZNF56Q15929 161 aa12.08□□□□□ -0.48
ARHGEF40-207ENST00000556399 LY6EQ16553 131 aa12.08□□□□□ -0.48
ARHGEF40-207ENST00000556399 PPP1R17O96001 155 aa12.08□□□□□ -0.48
ARHGEF40-207ENST00000556399 Q8TCH9 128 aa12.08□□□□□ -0.48
ARHGEF40-207ENST00000556399 RIF1Q5UIP0 2472 aaKnown RBP12.07□□□□□ -0.48
ARHGEF40-207ENST00000556399 HAX1O00165 279 aa12.07□□□□□ -0.48
ARHGEF40-207ENST00000556399 KLF5Q13887 457 aaPredicted RBP12.07□□□□□ -0.48
ARHGEF40-207ENST00000556399 TMEM75Q8N9X5 138 aa12.07□□□□□ -0.48
ARHGEF40-207ENST00000556399 COX6CP09669 75 aa12.07□□□□□ -0.48
ARHGEF40-207ENST00000556399 DIAPH2-AS1Q14236 149 aa12.07□□□□□ -0.48
ARHGEF40-207ENST00000556399 SIGMAR1Q99720 223 aa12.07□□□□□ -0.48
ARHGEF40-207ENST00000556399 IGLC7A0M8Q6 106 aa12.07□□□□□ -0.48
ARHGEF40-207ENST00000556399 THAP8Q8NA92 274 aa12.07□□□□□ -0.48
ARHGEF40-207ENST00000556399 P0C879 139 aa12.06□□□□□ -0.48
ARHGEF40-207ENST00000556399 LAGE3Q14657 143 aa12.06□□□□□ -0.48
ARHGEF40-207ENST00000556399 BVES-AS1Q5T3Y7 98 aa12.06□□□□□ -0.48
ARHGEF40-207ENST00000556399 CCL25O15444 150 aa12.06□□□□□ -0.48
ARHGEF40-207ENST00000556399 TRBV19A0A075B6N1 114 aa12.06□□□□□ -0.48
ARHGEF40-207ENST00000556399 LINC01559Q495D7 138 aa12.06□□□□□ -0.48
ARHGEF40-207ENST00000556399 A0A0G2JNJ9 132 aa12.06□□□□□ -0.48
ARHGEF40-207ENST00000556399 TGFAP01135 160 aa12.06□□□□□ -0.48
ARHGEF40-207ENST00000556399 COX8AP10176 69 aa12.06□□□□□ -0.48
ARHGEF40-207ENST00000556399 RNASE4P34096 147 aaKnown RBP12.06□□□□□ -0.48
ARHGEF40-207ENST00000556399 C8orf49Q96NF6 230 aa12.06□□□□□ -0.48
ARHGEF40-207ENST00000556399 Q9UFV3 132 aa12.06□□□□□ -0.48
ARHGEF40-207ENST00000556399 CHTOPQ9Y3Y2 248 aaKnown RBP12.06□□□□□ -0.48
ARHGEF40-207ENST00000556399 ESDP10768 282 aa12.05□□□□□ -0.48
ARHGEF40-207ENST00000556399 SMAGPQ0VAQ4 97 aa12.05□□□□□ -0.48
ARHGEF40-207ENST00000556399 KLRD1Q13241 179 aa12.05□□□□□ -0.48
ARHGEF40-207ENST00000556399 ZC2HC1BQ5TFG8 222 aa12.05□□□□□ -0.48
ARHGEF40-207ENST00000556399 MORN5Q5VZ52 161 aa12.05□□□□□ -0.48
ARHGEF40-207ENST00000556399 NEU4Q8WWR8 484 aaPredicted RBP12.05□□□□□ -0.48
ARHGEF40-207ENST00000556399 BEX4Q9NWD9 120 aaPredicted RBP12.05□□□□□ -0.48
ARHGEF40-207ENST00000556399 ACACAQ13085 2346 aa12.05□□□□□ -0.48
ARHGEF40-207ENST00000556399 CACNA1HO95180 2353 aa12.05□□□□□ -0.48
ARHGEF40-207ENST00000556399 ZNF672Q499Z4 452 aaPredicted RBP12.05□□□□□ -0.48
ARHGEF40-207ENST00000556399 ORMDL2Q53FV1 153 aa12.05□□□□□ -0.48
ARHGEF40-207ENST00000556399 FAM104BQ5XKR9 115 aa12.05□□□□□ -0.48
ARHGEF40-207ENST00000556399 TMEM158Q8WZ71 300 aa12.05□□□□□ -0.48
ARHGEF40-207ENST00000556399 PCNX1Q96RV3 2341 aa12.05□□□□□ -0.48
ARHGEF40-207ENST00000556399 FAM106AQ4KMX7 169 aa12.05□□□□□ -0.48
ARHGEF40-207ENST00000556399 TMEM155Q4W5P6 130 aa12.05□□□□□ -0.48
ARHGEF40-207ENST00000556399 IGLV3-9A0A075B6K5 115 aa12.05□□□□□ -0.48
ARHGEF40-207ENST00000556399 HOXA3O43365 443 aaPredicted RBP12.05□□□□□ -0.48
ARHGEF40-207ENST00000556399 IGKV3-20P01619 116 aa12.05□□□□□ -0.48
ARHGEF40-207ENST00000556399 C5orf64Q2M2E5 130 aa12.05□□□□□ -0.48
ARHGEF40-207ENST00000556399 IGF2BP2-AS1Q96M15 143 aa12.05□□□□□ -0.48
ARHGEF40-207ENST00000556399 SPRNQ5BIV9 151 aa12.04□□□□□ -0.48
ARHGEF40-207ENST00000556399 DDB2Q92466 427 aa12.04□□□□□ -0.48
ARHGEF40-207ENST00000556399 C15orf32Q32M92 178 aa12.04□□□□□ -0.48
ARHGEF40-207ENST00000556399 GAGE13Q4V321 117 aa12.04□□□□□ -0.48
ARHGEF40-207ENST00000556399 Q5PR19 223 aa12.04□□□□□ -0.48
ARHGEF40-207ENST00000556399 TEX36Q5VZQ5 186 aa12.04□□□□□ -0.48
ARHGEF40-207ENST00000556399 UTRNP46939 3433 aa12.04□□□□□ -0.48
ARHGEF40-207ENST00000556399 LTAP01374 205 aa12.04□□□□□ -0.48
ARHGEF40-207ENST00000556399 PDE6HQ13956 83 aa12.04□□□□□ -0.48
ARHGEF40-207ENST00000556399 ZNF815PA8K554 130 aa12.03□□□□□ -0.48
ARHGEF40-207ENST00000556399 ZC2HC1AQ96GY0 325 aa12.03□□□□□ -0.48
ARHGEF40-207ENST00000556399 JMJD8Q96S16 334 aa12.03□□□□□ -0.48
ARHGEF40-207ENST00000556399 CHAC1Q9BUX1 264 aa12.03□□□□□ -0.48
ARHGEF40-207ENST00000556399 H3BRM9 83 aa12.03□□□□□ -0.48
ARHGEF40-207ENST00000556399 GLMPQ8WWB7 406 aa12.03□□□□□ -0.48
ARHGEF40-207ENST00000556399 BRWD1-AS2P59051 145 aa12.03□□□□□ -0.48
ARHGEF40-207ENST00000556399 KLRB1Q12918 225 aa12.03□□□□□ -0.48
ARHGEF40-207ENST00000556399 DYNLRB2Q8TF09 96 aa12.03□□□□□ -0.48
ARHGEF40-207ENST00000556399 C9orf118A6NHY6 69 aa12.02□□□□□ -0.49
ARHGEF40-207ENST00000556399 LINC00311Q8N616 119 aa12.02□□□□□ -0.49
ARHGEF40-207ENST00000556399 TRAV21A0A0B4J279 112 aa12.02□□□□□ -0.49
ARHGEF40-207ENST00000556399 PRSS46E5RG02 174 aa12.02□□□□□ -0.49
ARHGEF40-207ENST00000556399 NPIPB6E9PJ23 425 aa12.02□□□□□ -0.49
ARHGEF40-207ENST00000556399 LOXP28300 417 aaPredicted RBP12.02□□□□□ -0.49
ARHGEF40-207ENST00000556399 TMEM14CQ9P0S9 112 aa12.02□□□□□ -0.49
ARHGEF40-207ENST00000556399 GTF3C1Q12789 2109 aa12.02□□□□□ -0.49
ARHGEF40-207ENST00000556399 Q6ZS92 163 aa12.01□□□□□ -0.49
ARHGEF40-207ENST00000556399 SRSF8Q9BRL6 282 aaKnown RBP12.01□□□□□ -0.49
ARHGEF40-207ENST00000556399 SIGLEC8Q9NYZ4 499 aa12.01□□□□□ -0.49
ARHGEF40-207ENST00000556399 IGKV1OR2-108A0A075B7D4 117 aa12.01□□□□□ -0.49
ARHGEF40-207ENST00000556399 TNFRSF6BO95407 300 aa12.01□□□□□ -0.49
ARHGEF40-207ENST00000556399 PAX2Q02962 417 aa12.01□□□□□ -0.49
ARHGEF40-207ENST00000556399 C3orf36Q3SXR2 165 aa12.01□□□□□ -0.49
ARHGEF40-207ENST00000556399 TTC32Q5I0X7 151 aa12.01□□□□□ -0.49
ARHGEF40-207ENST00000556399 PCNTO95613 3336 aa12.01□□□□□ -0.49
ARHGEF40-207ENST00000556399 PRSS57Q6UWY2 283 aa12.01□□□□□ -0.49
ARHGEF40-207ENST00000556399 IGHV3-11P01762 117 aa12.01□□□□□ -0.49
ARHGEF40-207ENST00000556399 MRPL51Q4U2R6 128 aaKnown RBP12.01□□□□□ -0.49
ARHGEF40-207ENST00000556399 LINC00173Q6ZV60 143 aa12.01□□□□□ -0.49
ARHGEF40-207ENST00000556399 NBASA2RRP1 2371 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms