RNA–Protein interactions for RNA: ENST00000556096.6

VPS33B-205, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-205ENST00000556096 CMTM2Q8TAZ6 248 aa11.36□□□□□ -0.59
VPS33B-205ENST00000556096 BTF3L4Q96K17 158 aa11.36□□□□□ -0.59
VPS33B-205ENST00000556096 C17orf77Q96MU5 243 aa11.36□□□□□ -0.59
VPS33B-205ENST00000556096 TRAV34A0A0B4J273 112 aa11.35□□□□□ -0.59
VPS33B-205ENST00000556096 CLPSL1A2RUU4 121 aa11.35□□□□□ -0.59
VPS33B-205ENST00000556096 ERVFC1-1P60608 527 aa11.35□□□□□ -0.59
VPS33B-205ENST00000556096 OR5I1Q13606 314 aa11.35□□□□□ -0.59
VPS33B-205ENST00000556096 C1orf194Q5T5A4 169 aa11.35□□□□□ -0.59
VPS33B-205ENST00000556096 OR8I2Q8N0Y5 310 aa11.35□□□□□ -0.59
VPS33B-205ENST00000556096 EXOC3-AS1Q8N2X6 119 aa11.35□□□□□ -0.59
VPS33B-205ENST00000556096 GPR82Q96P67 336 aa11.35□□□□□ -0.59
VPS33B-205ENST00000556096 PRSS22Q9GZN4 317 aa11.35□□□□□ -0.59
VPS33B-205ENST00000556096 KLK15Q9H2R5 256 aa11.35□□□□□ -0.59
VPS33B-205ENST00000556096 TRBV6-1A0A0K0K1D8 114 aa11.35□□□□□ -0.59
VPS33B-205ENST00000556096 HOXA3O43365 443 aaPredicted RBP11.35□□□□□ -0.59
VPS33B-205ENST00000556096 BUB3O43684 328 aa11.35□□□□□ -0.59
VPS33B-205ENST00000556096 ZNF253O75346 499 aa11.35□□□□□ -0.59
VPS33B-205ENST00000556096 IGHG4P01861 327 aa11.35□□□□□ -0.59
VPS33B-205ENST00000556096 ARL3P36405 182 aa11.35□□□□□ -0.59
VPS33B-205ENST00000556096 PSG9Q00887 426 aa11.35□□□□□ -0.59
VPS33B-205ENST00000556096 ZFP82Q8N141 532 aa11.35□□□□□ -0.59
VPS33B-205ENST00000556096 ARL6IP6Q8N6S5 226 aa11.35□□□□□ -0.59
VPS33B-205ENST00000556096 SRD5A3Q9H8P0 318 aa11.35□□□□□ -0.59
VPS33B-205ENST00000556096 IL36BQ9NZH7 164 aa11.35□□□□□ -0.59
VPS33B-205ENST00000556096 U3KQE9 123 aa11.35□□□□□ -0.59
VPS33B-205ENST00000556096 HIVEP2P31629 2446 aa11.34□□□□□ -0.59
VPS33B-205ENST00000556096 PPP5D1E7EU14 171 aa11.34□□□□□ -0.59
VPS33B-205ENST00000556096 SLC17A3O00476 420 aa11.34□□□□□ -0.59
VPS33B-205ENST00000556096 TYMSP04818 313 aa11.34□□□□□ -0.59
VPS33B-205ENST00000556096 FAM231DQ6ZW35 169 aa11.34□□□□□ -0.59
VPS33B-205ENST00000556096 METTL26Q96S19 204 aa11.34□□□□□ -0.59
VPS33B-205ENST00000556096 RPH3ALQ9UNE2 315 aa11.34□□□□□ -0.59
VPS33B-205ENST00000556096 SMAD5-AS1Q9Y6J3 95 aa11.34□□□□□ -0.59
VPS33B-205ENST00000556096 V9GYV3 84 aa11.34□□□□□ -0.59
VPS33B-205ENST00000556096 CUBNO60494 3623 aa11.33□□□□□ -0.6
VPS33B-205ENST00000556096 TRAV9-1A0A075B6T8 112 aa11.33□□□□□ -0.6
VPS33B-205ENST00000556096 A0A087X0K7 114 aa11.33□□□□□ -0.6
VPS33B-205ENST00000556096 NDUFA4O00483 81 aa11.33□□□□□ -0.6
VPS33B-205ENST00000556096 LTAP01374 205 aa11.33□□□□□ -0.6
VPS33B-205ENST00000556096 MGST1P10620 155 aaKnown RBP11.33□□□□□ -0.6
VPS33B-205ENST00000556096 PSMB8P28062 276 aa11.33□□□□□ -0.6
VPS33B-205ENST00000556096 RPL15P61313 204 aaKnown RBP11.33□□□□□ -0.6
VPS33B-205ENST00000556096 FAM209BQ5JX69 171 aa11.33□□□□□ -0.6
VPS33B-205ENST00000556096 MLST8Q9BVC4 326 aa11.33□□□□□ -0.6
VPS33B-205ENST00000556096 NPFFR1Q9GZQ6 430 aa11.33□□□□□ -0.6
VPS33B-205ENST00000556096 AAMDCQ9H7C9 122 aa11.33□□□□□ -0.6
VPS33B-205ENST00000556096 BIN3Q9NQY0 253 aa11.33□□□□□ -0.6
VPS33B-205ENST00000556096 FN1P02751 2386 aaKnown RBP11.33□□□□□ -0.6
VPS33B-205ENST00000556096 NSD1Q96L73 2696 aaPredicted RBP11.33□□□□□ -0.6
VPS33B-205ENST00000556096 IGHV3OR16-8A0A075B7F1 116 aa11.32□□□□□ -0.6
VPS33B-205ENST00000556096 A0A1W2PPQ1 181 aa11.32□□□□□ -0.6
VPS33B-205ENST00000556096 FAM3BP58499 235 aaPredicted RBP11.32□□□□□ -0.6
VPS33B-205ENST00000556096 IBA57Q5T440 356 aaKnown RBP11.32□□□□□ -0.6
VPS33B-205ENST00000556096 OR4X2Q8NGF9 303 aa11.32□□□□□ -0.6
VPS33B-205ENST00000556096 SERTM2A0A1B0GWG4 89 aa11.32□□□□□ -0.6
VPS33B-205ENST00000556096 K7EQM0 130 aa11.32□□□□□ -0.6
VPS33B-205ENST00000556096 TMEM95Q3KNT9 176 aa11.32□□□□□ -0.6
VPS33B-205ENST00000556096 GOLT1AQ6ZVE7 132 aa11.32□□□□□ -0.6
VPS33B-205ENST00000556096 TMEM86BQ8N661 226 aa11.32□□□□□ -0.6
VPS33B-205ENST00000556096 TMEM75Q8N9X5 138 aa11.32□□□□□ -0.6
VPS33B-205ENST00000556096 RNASE7Q9H1E1 156 aaKnown RBP11.32□□□□□ -0.6
VPS33B-205ENST00000556096 ZNF702PQ9H963 129 aa11.32□□□□□ -0.6
VPS33B-205ENST00000556096 DIRC3C9JPN6 131 aa11.31□□□□□ -0.6
VPS33B-205ENST00000556096 IGLV2-11P01706 119 aa11.31□□□□□ -0.6
VPS33B-205ENST00000556096 TRBV12-3P01733 135 aa11.31□□□□□ -0.6
VPS33B-205ENST00000556096 TRGC2P03986 189 aa11.31□□□□□ -0.6
VPS33B-205ENST00000556096 RPEL1Q2QD12 228 aa11.31□□□□□ -0.6
VPS33B-205ENST00000556096 SIGLECL1Q8N7X8 197 aa11.31□□□□□ -0.6
VPS33B-205ENST00000556096 NHLRC2Q8NBF2 726 aa11.31□□□□□ -0.6
VPS33B-205ENST00000556096 IGHV3-11P01762 117 aa11.3□□□□□ -0.6
VPS33B-205ENST00000556096 CSN1S1P47710 185 aa11.3□□□□□ -0.6
VPS33B-205ENST00000556096 Q86TA4 180 aa11.3□□□□□ -0.6
VPS33B-205ENST00000556096 Q8N2B8 174 aa11.3□□□□□ -0.6
VPS33B-205ENST00000556096 SGK494Q96LW2 274 aa11.3□□□□□ -0.6
VPS33B-205ENST00000556096 ZNF785A8K8V0 405 aa11.29□□□□□ -0.6
VPS33B-205ENST00000556096 PHOX2AO14813 284 aa11.29□□□□□ -0.6
VPS33B-205ENST00000556096 MEOX2P50222 304 aa11.29□□□□□ -0.6
VPS33B-205ENST00000556096 SLC35B1P78383 322 aa11.29□□□□□ -0.6
VPS33B-205ENST00000556096 TMEM183AQ8IXX5 376 aa11.29□□□□□ -0.6
VPS33B-205ENST00000556096 ZNF331Q9NQX6 463 aaPredicted RBP11.29□□□□□ -0.6
VPS33B-205ENST00000556096 ZFP30Q9Y2G7 519 aa11.29□□□□□ -0.6
VPS33B-205ENST00000556096 ZNF320A2RRD8 509 aa11.29□□□□□ -0.6
VPS33B-205ENST00000556096 APOHP02749 345 aaPredicted RBP11.29□□□□□ -0.6
VPS33B-205ENST00000556096 S100A6P06703 90 aa11.29□□□□□ -0.6
VPS33B-205ENST00000556096 ELANEP08246 267 aa11.29□□□□□ -0.6
VPS33B-205ENST00000556096 FOXE3Q13461 319 aa11.29□□□□□ -0.6
VPS33B-205ENST00000556096 PSG3Q16557 428 aa11.29□□□□□ -0.6
VPS33B-205ENST00000556096 C16orf54Q6UWD8 224 aa11.29□□□□□ -0.6
VPS33B-205ENST00000556096 LCNL1Q6ZST4 164 aa11.29□□□□□ -0.6
VPS33B-205ENST00000556096 NUDT10Q8NFP7 164 aa11.29□□□□□ -0.6
VPS33B-205ENST00000556096 NUDT11Q96G61 164 aa11.29□□□□□ -0.6
VPS33B-205ENST00000556096 ZNF492Q9P255 531 aa11.29□□□□□ -0.6
VPS33B-205ENST00000556096 PEF1Q9UBV8 284 aaKnown RBP11.29□□□□□ -0.6
VPS33B-205ENST00000556096 FBLL1A6NHQ2 334 aaKnown RBP11.28□□□□□ -0.6
VPS33B-205ENST00000556096 ZNF705GA8MUZ8 300 aaPredicted RBP11.28□□□□□ -0.6
VPS33B-205ENST00000556096 M0R3E3 92 aa11.28□□□□□ -0.6
VPS33B-205ENST00000556096 ZNF207O43670 478 aaKnown RBP11.28□□□□□ -0.6
VPS33B-205ENST00000556096 GATCO43716 136 aaKnown RBP11.28□□□□□ -0.6
VPS33B-205ENST00000556096 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.28□□□□□ -0.6
VPS33B-205ENST00000556096 SLC50A1Q9BRV3 221 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms