RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 OPCMLQ14982 345 aa14.81□□□□□ -0.04
VTI1B-205ENST00000555543 C10orf113Q5VZT2 155 aa14.81□□□□□ -0.04
VTI1B-205ENST00000555543 CHAC2Q8WUX2 184 aa14.81□□□□□ -0.04
VTI1B-205ENST00000555543 RLN2P04090 185 aa14.8□□□□□ -0.04
VTI1B-205ENST00000555543 ZNF705DP0CH99 300 aaPredicted RBP14.8□□□□□ -0.04
VTI1B-205ENST00000555543 ZNF705BP0CI00 300 aaPredicted RBP14.8□□□□□ -0.04
VTI1B-205ENST00000555543 PRB4P10163 310 aaPredicted RBP14.8□□□□□ -0.04
VTI1B-205ENST00000555543 CXCL3P19876 107 aa14.8□□□□□ -0.04
VTI1B-205ENST00000555543 FGF7P21781 194 aa14.8□□□□□ -0.04
VTI1B-205ENST00000555543 PSG9Q00887 426 aa14.8□□□□□ -0.04
VTI1B-205ENST00000555543 AMTNQ6UX39 209 aa14.8□□□□□ -0.04
VTI1B-205ENST00000555543 ZNF705AQ6ZN79 300 aaPredicted RBP14.8□□□□□ -0.04
VTI1B-205ENST00000555543 PPP1R1CQ8WVI7 109 aa14.8□□□□□ -0.04
VTI1B-205ENST00000555543 SLC39A9Q9NUM3 307 aa14.8□□□□□ -0.04
VTI1B-205ENST00000555543 ZNF705FA8MVS1 300 aaPredicted RBP14.79□□□□□ -0.04
VTI1B-205ENST00000555543 RPL29P47914 159 aaKnown RBP14.79□□□□□ -0.04
VTI1B-205ENST00000555543 B2MP61769 119 aa14.79□□□□□ -0.04
VTI1B-205ENST00000555543 CYCSP99999 105 aaKnown RBP14.79□□□□□ -0.04
VTI1B-205ENST00000555543 ATP6V1FQ16864 119 aa14.79□□□□□ -0.04
VTI1B-205ENST00000555543 ZNF738Q8NE65 137 aa14.79□□□□□ -0.04
VTI1B-205ENST00000555543 OR5C1Q8NGR4 320 aa14.79□□□□□ -0.04
VTI1B-205ENST00000555543 MFFQ9GZY8 342 aa14.79□□□□□ -0.04
VTI1B-205ENST00000555543 DNAJC4Q9NNZ3 241 aa14.79□□□□□ -0.04
VTI1B-205ENST00000555543 TRAV5A0A0B4J249 113 aa14.78□□□□□ -0.04
VTI1B-205ENST00000555543 H3BTX0 84 aa14.78□□□□□ -0.04
VTI1B-205ENST00000555543 CNN1P51911 297 aaKnown RBP14.78□□□□□ -0.04
VTI1B-205ENST00000555543 Q6ZRG5 221 aa14.78□□□□□ -0.04
VTI1B-205ENST00000555543 THAP6Q8TBB0 222 aa14.78□□□□□ -0.04
VTI1B-205ENST00000555543 SLC25A31Q9H0C2 315 aa14.78□□□□□ -0.04
VTI1B-205ENST00000555543 HRH4Q9H3N8 390 aa14.78□□□□□ -0.04
VTI1B-205ENST00000555543 CELA1Q9UNI1 258 aa14.78□□□□□ -0.04
VTI1B-205ENST00000555543 RNF24Q9Y225 148 aa14.78□□□□□ -0.04
VTI1B-205ENST00000555543 PXMP4Q9Y6I8 212 aa14.78□□□□□ -0.04
VTI1B-205ENST00000555543 SLC17A3O00476 420 aa14.77□□□□□ -0.05
VTI1B-205ENST00000555543 CLINT1Q14677 625 aa14.77□□□□□ -0.05
VTI1B-205ENST00000555543 BPIFA4PQ86YQ2 179 aa14.77□□□□□ -0.05
VTI1B-205ENST00000555543 RNF126Q9BV68 326 aa14.77□□□□□ -0.05
VTI1B-205ENST00000555543 NPCDR1Q9BY65 106 aa14.77□□□□□ -0.05
VTI1B-205ENST00000555543 IGHV3OR16-12A0A075B7B8 117 aa14.76□□□□□ -0.05
VTI1B-205ENST00000555543 PFDN1O60925 122 aa14.76□□□□□ -0.05
VTI1B-205ENST00000555543 MPC2O95563 127 aa14.76□□□□□ -0.05
VTI1B-205ENST00000555543 IGLC2P0DOY2 106 aa14.76□□□□□ -0.05
VTI1B-205ENST00000555543 CXCL2P19875 107 aa14.76□□□□□ -0.05
VTI1B-205ENST00000555543 PSG3Q16557 428 aa14.76□□□□□ -0.05
VTI1B-205ENST00000555543 LCN15Q6UWW0 184 aa14.76□□□□□ -0.05
VTI1B-205ENST00000555543 C1orf158Q8N1D5 194 aa14.76□□□□□ -0.05
VTI1B-205ENST00000555543 OR11H7Q8NGC8 314 aa14.76□□□□□ -0.05
VTI1B-205ENST00000555543 OR1L4Q8NGR5 311 aa14.76□□□□□ -0.05
VTI1B-205ENST00000555543 LRRC20Q8TCA0 184 aa14.76□□□□□ -0.05
VTI1B-205ENST00000555543 ZNF331Q9NQX6 463 aaPredicted RBP14.76□□□□□ -0.05
VTI1B-205ENST00000555543 KLK5Q9Y337 293 aaPredicted RBP14.76□□□□□ -0.05
VTI1B-205ENST00000555543 H3BQ15 152 aa14.75□□□□□ -0.05
VTI1B-205ENST00000555543 MPDU1O75352 247 aa14.75□□□□□ -0.05
VTI1B-205ENST00000555543 GCSAMLQ5JQS6 135 aa14.75□□□□□ -0.05
VTI1B-205ENST00000555543 LINC00476Q8WZB0 136 aa14.75□□□□□ -0.05
VTI1B-205ENST00000555543 PFDN5Q99471 154 aa14.75□□□□□ -0.05
VTI1B-205ENST00000555543 NEU1Q99519 415 aa14.75□□□□□ -0.05
VTI1B-205ENST00000555543 M0R2Z0 102 aa14.74□□□□□ -0.05
VTI1B-205ENST00000555543 DUSP14O95147 198 aaKnown RBP14.74□□□□□ -0.05
VTI1B-205ENST00000555543 OR8A1Q8NGG7 326 aa14.74□□□□□ -0.05
VTI1B-205ENST00000555543 MED28Q9H204 178 aa14.74□□□□□ -0.05
VTI1B-205ENST00000555543 HIST1H1AQ02539 215 aaPredicted RBP14.73□□□□□ -0.05
VTI1B-205ENST00000555543 SPINK13Q1W4C9 94 aa14.73□□□□□ -0.05
VTI1B-205ENST00000555543 Q6ZTC4 211 aa14.73□□□□□ -0.05
VTI1B-205ENST00000555543 RPUSD4Q96CM3 377 aaKnown RBP14.73□□□□□ -0.05
VTI1B-205ENST00000555543 SLC50A1Q9BRV3 221 aa14.73□□□□□ -0.05
VTI1B-205ENST00000555543 MBD2Q9UBB5 411 aa14.73□□□□□ -0.05
VTI1B-205ENST00000555543 CRXO43186 299 aaPredicted RBP14.72□□□□□ -0.05
VTI1B-205ENST00000555543 PET100P0DJ07 73 aa14.72□□□□□ -0.05
VTI1B-205ENST00000555543 FCN2Q15485 313 aa14.72□□□□□ -0.05
VTI1B-205ENST00000555543 ZNF767PQ75MW2 155 aa14.72□□□□□ -0.05
VTI1B-205ENST00000555543 SAT2Q96F10 170 aaPredicted RBP14.72□□□□□ -0.05
VTI1B-205ENST00000555543 IGF2BP2-AS1Q96M15 143 aa14.72□□□□□ -0.05
VTI1B-205ENST00000555543 WDR61Q9GZS3 305 aaKnown RBP14.72□□□□□ -0.05
VTI1B-205ENST00000555543 GOLT1BQ9Y3E0 138 aa14.72□□□□□ -0.05
VTI1B-205ENST00000555543 HSPB11Q9Y547 144 aa14.72□□□□□ -0.05
VTI1B-205ENST00000555543 PRAC2D3DTV9 90 aa14.71□□□□□ -0.05
VTI1B-205ENST00000555543 BAP18Q8IXM2 172 aa14.71□□□□□ -0.05
VTI1B-205ENST00000555543 ZNF586Q9NXT0 402 aa14.71□□□□□ -0.05
VTI1B-205ENST00000555543 EPPK1P58107 5090 aaKnown RBP14.71□□□□□ -0.05
VTI1B-205ENST00000555543 SMIM9A6NGZ8 99 aa14.7□□□□□ -0.06
VTI1B-205ENST00000555543 BOLA2-SMG1P6H3BVE0 249 aa14.7□□□□□ -0.06
VTI1B-205ENST00000555543 LY6G6CO95867 125 aa14.7□□□□□ -0.06
VTI1B-205ENST00000555543 EMP1P54849 157 aa14.7□□□□□ -0.06
VTI1B-205ENST00000555543 C12orf74Q32Q52 190 aa14.7□□□□□ -0.06
VTI1B-205ENST00000555543 AKAP14Q86UN6 197 aa14.7□□□□□ -0.06
VTI1B-205ENST00000555543 ATP5SQ99766 215 aa14.7□□□□□ -0.06
VTI1B-205ENST00000555543 RFNGQ9Y644 331 aa14.7□□□□□ -0.06
VTI1B-205ENST00000555543 VPS13DQ5THJ4 4388 aa14.69□□□□□ -0.06
VTI1B-205ENST00000555543 KMT2AQ03164 3969 aa14.69□□□□□ -0.06
VTI1B-205ENST00000555543 TRAV12-2A0A075B6T6 113 aa14.69□□□□□ -0.06
VTI1B-205ENST00000555543 AMBPP02760 352 aa14.69□□□□□ -0.06
VTI1B-205ENST00000555543 PYYP10082 97 aa14.69□□□□□ -0.06
VTI1B-205ENST00000555543 RPL12P30050 165 aaKnown RBP14.69□□□□□ -0.06
VTI1B-205ENST00000555543 RHOBP62745 196 aa14.69□□□□□ -0.06
VTI1B-205ENST00000555543 C2CD4CQ8TF44 421 aa14.69□□□□□ -0.06
VTI1B-205ENST00000555543 SMIM3Q9BZL3 60 aa14.69□□□□□ -0.06
VTI1B-205ENST00000555543 C11orf94C9JXX5 98 aa14.68□□□□□ -0.06
VTI1B-205ENST00000555543 INSP01308 110 aa14.68□□□□□ -0.06
VTI1B-205ENST00000555543 GUK1Q16774 197 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms