RNA–Protein interactions for RNA: ENST00000555542.5

PRKCH-216, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-216ENST00000555542 HIST1H1AQ02539 215 aaPredicted RBP17.51■□□□□ 0.39
PRKCH-216ENST00000555542 FAM222AQ5U5X8 452 aa17.51■□□□□ 0.39
PRKCH-216ENST00000555542 AMTNQ6UX39 209 aa17.51■□□□□ 0.39
PRKCH-216ENST00000555542 BIRC6Q9NR09 4857 aa17.51■□□□□ 0.39
PRKCH-216ENST00000555542 KMT2AQ03164 3969 aa17.5■□□□□ 0.39
PRKCH-216ENST00000555542 A8MTW9 85 aa17.5■□□□□ 0.39
PRKCH-216ENST00000555542 CXCL3P19876 107 aa17.5■□□□□ 0.39
PRKCH-216ENST00000555542 CAMLGP49069 296 aa17.5■□□□□ 0.39
PRKCH-216ENST00000555542 ENKURQ8TC29 256 aa17.5■□□□□ 0.39
PRKCH-216ENST00000555542 NIPSNAP3BQ9BS92 247 aa17.5■□□□□ 0.39
PRKCH-216ENST00000555542 NDUFAF3Q9BU61 184 aa17.5■□□□□ 0.39
PRKCH-216ENST00000555542 DKK2Q9UBU2 259 aa17.5■□□□□ 0.39
PRKCH-216ENST00000555542 YTHDF2Q9Y5A9 579 aaKnown RBP17.5■□□□□ 0.39
PRKCH-216ENST00000555542 PSG3Q16557 428 aa17.49■□□□□ 0.39
PRKCH-216ENST00000555542 C10orf113Q5VZT2 155 aa17.49■□□□□ 0.39
PRKCH-216ENST00000555542 Q6ZRG5 221 aa17.49■□□□□ 0.39
PRKCH-216ENST00000555542 STX12Q86Y82 276 aa17.49■□□□□ 0.39
PRKCH-216ENST00000555542 UQCC1Q9NVA1 299 aa17.49■□□□□ 0.39
PRKCH-216ENST00000555542 SNRPCP09234 159 aaKnown RBP17.48■□□□□ 0.39
PRKCH-216ENST00000555542 ASAH1Q13510 395 aa17.48■□□□□ 0.39
PRKCH-216ENST00000555542 LCN15Q6UWW0 184 aa17.48■□□□□ 0.39
PRKCH-216ENST00000555542 NRARPQ7Z6K4 114 aa17.48■□□□□ 0.39
PRKCH-216ENST00000555542 BPIFA4PQ86YQ2 179 aa17.48■□□□□ 0.39
PRKCH-216ENST00000555542 BAP18Q8IXM2 172 aa17.48■□□□□ 0.39
PRKCH-216ENST00000555542 OR8A1Q8NGG7 326 aa17.48■□□□□ 0.39
PRKCH-216ENST00000555542 UBE2L5PA0A1B0GUS4 154 aa17.47■□□□□ 0.39
PRKCH-216ENST00000555542 BOLA2-SMG1P6H3BVE0 249 aa17.47■□□□□ 0.39
PRKCH-216ENST00000555542 HTN3P15516 51 aa17.47■□□□□ 0.39
PRKCH-216ENST00000555542 CXCL2P19875 107 aa17.47■□□□□ 0.39
PRKCH-216ENST00000555542 RAB32Q13637 225 aa17.47■□□□□ 0.39
PRKCH-216ENST00000555542 GPN1Q9HCN4 374 aaPredicted RBP17.47■□□□□ 0.39
PRKCH-216ENST00000555542 LYRM2Q9NU23 88 aaPredicted RBP17.47■□□□□ 0.39
PRKCH-216ENST00000555542 TRAV12-2A0A075B6T6 113 aa17.46■□□□□ 0.39
PRKCH-216ENST00000555542 PRB4P10163 310 aaPredicted RBP17.46■□□□□ 0.39
PRKCH-216ENST00000555542 SULT1A1P50225 295 aa17.46■□□□□ 0.39
PRKCH-216ENST00000555542 HBG1P69891 147 aa17.46■□□□□ 0.39
PRKCH-216ENST00000555542 HBG2P69892 147 aa17.46■□□□□ 0.39
PRKCH-216ENST00000555542 BAXQ07812 192 aa17.46■□□□□ 0.39
PRKCH-216ENST00000555542 TMEM37Q8WXS4 190 aa17.46■□□□□ 0.39
PRKCH-216ENST00000555542 RPUSD4Q96CM3 377 aaKnown RBP17.46■□□□□ 0.39
PRKCH-216ENST00000555542 SLC50A1Q9BRV3 221 aa17.46■□□□□ 0.39
PRKCH-216ENST00000555542 C11orf1Q9H5F2 150 aa17.46■□□□□ 0.39
PRKCH-216ENST00000555542 MRPS12O15235 138 aaKnown RBP17.45■□□□□ 0.38
PRKCH-216ENST00000555542 S100A11P31949 105 aa17.45■□□□□ 0.38
PRKCH-216ENST00000555542 MIC13Q5XKP0 118 aa17.45■□□□□ 0.38
PRKCH-216ENST00000555542 OR1L4Q8NGR5 311 aa17.45■□□□□ 0.38
PRKCH-216ENST00000555542 DNAJC4Q9NNZ3 241 aa17.45■□□□□ 0.38
PRKCH-216ENST00000555542 PLA2G2EQ9NZK7 142 aa17.45■□□□□ 0.38
PRKCH-216ENST00000555542 WDR83OSQ9Y284 106 aa17.45■□□□□ 0.38
PRKCH-216ENST00000555542 IGSF23A1L1A6 192 aa17.44■□□□□ 0.38
PRKCH-216ENST00000555542 ZNF705GA8MUZ8 300 aaPredicted RBP17.44■□□□□ 0.38
PRKCH-216ENST00000555542 CRXO43186 299 aaPredicted RBP17.44■□□□□ 0.38
PRKCH-216ENST00000555542 P0DMU3 169 aa17.44■□□□□ 0.38
PRKCH-216ENST00000555542 FAM231AP0DMU4 169 aa17.44■□□□□ 0.38
PRKCH-216ENST00000555542 FAM231CP0DMU5 169 aa17.44■□□□□ 0.38
PRKCH-216ENST00000555542 B2MP61769 119 aa17.44■□□□□ 0.38
PRKCH-216ENST00000555542 DAD1P61803 113 aa17.44■□□□□ 0.38
PRKCH-216ENST00000555542 OPCMLQ14982 345 aa17.44■□□□□ 0.38
PRKCH-216ENST00000555542 TMEM252Q8N6L7 170 aa17.44■□□□□ 0.38
PRKCH-216ENST00000555542 ZNF331Q9NQX6 463 aaPredicted RBP17.44■□□□□ 0.38
PRKCH-216ENST00000555542 H3BTX0 84 aa17.43■□□□□ 0.38
PRKCH-216ENST00000555542 UPK1BO75841 260 aa17.43■□□□□ 0.38
PRKCH-216ENST00000555542 MORN5Q5VZ52 161 aa17.43■□□□□ 0.38
PRKCH-216ENST00000555542 PFDN5Q99471 154 aa17.43■□□□□ 0.38
PRKCH-216ENST00000555542 VWC2Q2TAL6 325 aa17.42■□□□□ 0.38
PRKCH-216ENST00000555542 LINC01587Q99440 93 aa17.42■□□□□ 0.38
PRKCH-216ENST00000555542 FGF7P21781 194 aa17.41■□□□□ 0.38
PRKCH-216ENST00000555542 OXA1LQ15070 435 aa17.41■□□□□ 0.38
PRKCH-216ENST00000555542 SLC39A9Q9NUM3 307 aa17.41■□□□□ 0.38
PRKCH-216ENST00000555542 PXMP4Q9Y6I8 212 aa17.41■□□□□ 0.38
PRKCH-216ENST00000555542 SLC17A3O00476 420 aa17.4■□□□□ 0.38
PRKCH-216ENST00000555542 PRM2P04554 102 aa17.4■□□□□ 0.38
PRKCH-216ENST00000555542 HTN1P15515 57 aa17.4■□□□□ 0.38
PRKCH-216ENST00000555542 IL15RAQ13261 267 aa17.4■□□□□ 0.38
PRKCH-216ENST00000555542 ATP6V1FQ16864 119 aa17.4■□□□□ 0.38
PRKCH-216ENST00000555542 OR10J6PQ8NGY7 276 aa17.4■□□□□ 0.38
PRKCH-216ENST00000555542 FAM210BQ96KR6 192 aa17.4■□□□□ 0.38
PRKCH-216ENST00000555542 TRAV5A0A0B4J249 113 aa17.39■□□□□ 0.37
PRKCH-216ENST00000555542 RLN2P04090 185 aa17.39■□□□□ 0.37
PRKCH-216ENST00000555542 CDKN1BP46527 198 aa17.39■□□□□ 0.37
PRKCH-216ENST00000555542 RPL29P47914 159 aaKnown RBP17.39■□□□□ 0.37
PRKCH-216ENST00000555542 UBE2DNLQ8IWF7 75 aa17.39■□□□□ 0.37
PRKCH-216ENST00000555542 TMEM256Q8N2U0 113 aa17.39■□□□□ 0.37
PRKCH-216ENST00000555542 PTTG2Q9NZH5 202 aa17.39■□□□□ 0.37
PRKCH-216ENST00000555542 SIX6O95475 246 aa17.38■□□□□ 0.37
PRKCH-216ENST00000555542 IGLC2P0DOY2 106 aa17.38■□□□□ 0.37
PRKCH-216ENST00000555542 GUK1Q16774 197 aa17.38■□□□□ 0.37
PRKCH-216ENST00000555542 LRRC37A5PQ49AS3 106 aa17.38■□□□□ 0.37
PRKCH-216ENST00000555542 POM121L12Q8N7R1 296 aa17.38■□□□□ 0.37
PRKCH-216ENST00000555542 A6NHS1 94 aa17.37■□□□□ 0.37
PRKCH-216ENST00000555542 LYRM9A8MSI8 78 aa17.37■□□□□ 0.37
PRKCH-216ENST00000555542 H3BQ15 152 aa17.37■□□□□ 0.37
PRKCH-216ENST00000555542 PRAF2O60831 178 aa17.36■□□□□ 0.37
PRKCH-216ENST00000555542 MPDU1O75352 247 aa17.36■□□□□ 0.37
PRKCH-216ENST00000555542 DEFB130BP0DP73 79 aa17.36■□□□□ 0.37
PRKCH-216ENST00000555542 DEFB130AP0DP74 79 aa17.36■□□□□ 0.37
PRKCH-216ENST00000555542 TSPOP30536 169 aa17.36■□□□□ 0.37
PRKCH-216ENST00000555542 TAS2R60P59551 318 aa17.36■□□□□ 0.37
PRKCH-216ENST00000555542 SLC25A31Q9H0C2 315 aa17.36■□□□□ 0.37
PRKCH-216ENST00000555542 INMT-MINDY4F8WBC2 141 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 146.8 ms