RNA–Protein interactions for RNA: ENST00000554879.5

PCNX1-209, Transcript of pecanex 1, humanhuman

TSL 1 (best)

Gene PCNX1, Length 4,431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-209ENST00000554879 TGFAP01135 160 aa13.32□□□□□ -0.28
PCNX1-209ENST00000554879 CGB3P0DN86 165 aa13.32□□□□□ -0.28
PCNX1-209ENST00000554879 CGB7P0DN87 165 aa13.32□□□□□ -0.28
PCNX1-209ENST00000554879 DOPEY1Q5JWR5 2465 aa13.32□□□□□ -0.28
PCNX1-209ENST00000554879 WDR83OSQ9Y284 106 aa13.32□□□□□ -0.28
PCNX1-209ENST00000554879 NBR2O15453 112 aa13.32□□□□□ -0.28
PCNX1-209ENST00000554879 RPL15P61313 204 aaKnown RBP13.32□□□□□ -0.28
PCNX1-209ENST00000554879 FAM90A9PA6NNJ1 464 aa13.32□□□□□ -0.28
PCNX1-209ENST00000554879 ADAMTSL5Q6ZMM2 481 aa13.32□□□□□ -0.28
PCNX1-209ENST00000554879 OR5AN1Q8NGI8 311 aa13.32□□□□□ -0.28
PCNX1-209ENST00000554879 PRTN3P24158 256 aa13.31□□□□□ -0.28
PCNX1-209ENST00000554879 ETDBQ3ZM63 59 aa13.31□□□□□ -0.28
PCNX1-209ENST00000554879 CENPWQ5EE01 88 aa13.31□□□□□ -0.28
PCNX1-209ENST00000554879 KLF17Q5JT82 389 aaPredicted RBP13.31□□□□□ -0.28
PCNX1-209ENST00000554879 MYO9AB2RTY4 2548 aa13.31□□□□□ -0.28
PCNX1-209ENST00000554879 LOC389332A0A1B0GUA5 103 aa13.31□□□□□ -0.28
PCNX1-209ENST00000554879 CXorf1O96002 111 aa13.31□□□□□ -0.28
PCNX1-209ENST00000554879 STAG3L2P0CL84 134 aa13.31□□□□□ -0.28
PCNX1-209ENST00000554879 HIST1H1AQ02539 215 aaPredicted RBP13.31□□□□□ -0.28
PCNX1-209ENST00000554879 AREGP15514 252 aa13.31□□□□□ -0.28
PCNX1-209ENST00000554879 FAM162BQ5T6X4 162 aa13.31□□□□□ -0.28
PCNX1-209ENST00000554879 RPL11P62913 178 aaKnown RBP13.31□□□□□ -0.28
PCNX1-209ENST00000554879 ASPHD1Q5U4P2 390 aa13.31□□□□□ -0.28
PCNX1-209ENST00000554879 TMEM167AQ8TBQ9 72 aa13.31□□□□□ -0.28
PCNX1-209ENST00000554879 HCFC1P51610 2035 aa13.3□□□□□ -0.28
PCNX1-209ENST00000554879 IGHV3OR16-8A0A075B7F1 116 aa13.3□□□□□ -0.28
PCNX1-209ENST00000554879 KIR3DS1Q14943 382 aa13.3□□□□□ -0.28
PCNX1-209ENST00000554879 KHDC1LQ5JSQ8 128 aa13.3□□□□□ -0.28
PCNX1-209ENST00000554879 ODF3L1Q8IXM7 274 aa13.3□□□□□ -0.28
PCNX1-209ENST00000554879 OR1L4Q8NGR5 311 aa13.3□□□□□ -0.28
PCNX1-209ENST00000554879 SLC25A33Q9BSK2 321 aa13.3□□□□□ -0.28
PCNX1-209ENST00000554879 TMEM14BQ9NUH8 114 aa13.3□□□□□ -0.28
PCNX1-209ENST00000554879 SPINK8P0C7L1 97 aa13.3□□□□□ -0.28
PCNX1-209ENST00000554879 HERV-K104P63124 156 aa13.3□□□□□ -0.28
PCNX1-209ENST00000554879 PSG3Q16557 428 aa13.3□□□□□ -0.28
PCNX1-209ENST00000554879 TMEM219Q86XT9 240 aa13.3□□□□□ -0.28
PCNX1-209ENST00000554879 SMIM13P0DJ93 91 aa13.3□□□□□ -0.28
PCNX1-209ENST00000554879 CR1LQ2VPA4 569 aa13.29□□□□□ -0.28
PCNX1-209ENST00000554879 LINC00527Q9UJ94 153 aa13.29□□□□□ -0.28
PCNX1-209ENST00000554879 SIGLEC9Q9Y336 463 aa13.29□□□□□ -0.28
PCNX1-209ENST00000554879 TIMM9Q9Y5J7 89 aa13.29□□□□□ -0.28
PCNX1-209ENST00000554879 SAMD5Q5TGI4 173 aa13.29□□□□□ -0.28
PCNX1-209ENST00000554879 TEX45Q8NA69 505 aa13.29□□□□□ -0.28
PCNX1-209ENST00000554879 RNF114Q9Y508 228 aa13.29□□□□□ -0.28
PCNX1-209ENST00000554879 NAV3Q8IVL0 2385 aa13.29□□□□□ -0.28
PCNX1-209ENST00000554879 G3V4G9 280 aa13.29□□□□□ -0.28
PCNX1-209ENST00000554879 COX19Q49B96 90 aa13.29□□□□□ -0.28
PCNX1-209ENST00000554879 OR2J3O76001 311 aa13.29□□□□□ -0.28
PCNX1-209ENST00000554879 CD69Q07108 199 aa13.29□□□□□ -0.28
PCNX1-209ENST00000554879 TMEM136Q6ZRR5 245 aa13.29□□□□□ -0.28
PCNX1-209ENST00000554879 EAF1Q96JC9 268 aaPredicted RBP13.29□□□□□ -0.28
PCNX1-209ENST00000554879 RITA1Q96K30 269 aa13.29□□□□□ -0.28
PCNX1-209ENST00000554879 GGTLC1Q9BX51 225 aa13.29□□□□□ -0.28
PCNX1-209ENST00000554879 M0R1W7 72 aa13.28□□□□□ -0.28
PCNX1-209ENST00000554879 YTHDF2Q9Y5A9 579 aaKnown RBP13.28□□□□□ -0.28
PCNX1-209ENST00000554879 LOC107984156A0A0G2JMH3 177 aa13.28□□□□□ -0.28
PCNX1-209ENST00000554879 SMAD7O15105 426 aaKnown RBP13.28□□□□□ -0.28
PCNX1-209ENST00000554879 VDAC2P45880 294 aaPredicted RBP13.28□□□□□ -0.28
PCNX1-209ENST00000554879 ARL17AQ8IVW1 177 aa13.28□□□□□ -0.28
PCNX1-209ENST00000554879 DEFB125Q8N687 156 aa13.28□□□□□ -0.28
PCNX1-209ENST00000554879 TMSB15BA0A087X1C1 80 aa13.28□□□□□ -0.28
PCNX1-209ENST00000554879 MIR17HGQ75NE6 70 aa13.28□□□□□ -0.28
PCNX1-209ENST00000554879 MGST2Q99735 147 aa13.28□□□□□ -0.28
PCNX1-209ENST00000554879 C19orf24Q9BVV8 132 aa13.28□□□□□ -0.28
PCNX1-209ENST00000554879 SETD2Q9BYW2 2564 aaPredicted RBP13.28□□□□□ -0.28
PCNX1-209ENST00000554879 SLC25A5P05141 298 aaKnown RBP13.27□□□□□ -0.28
PCNX1-209ENST00000554879 SAA4P35542 130 aa13.27□□□□□ -0.28
PCNX1-209ENST00000554879 ZNF138P52744 262 aa13.27□□□□□ -0.28
PCNX1-209ENST00000554879 TTC32Q5I0X7 151 aa13.27□□□□□ -0.28
PCNX1-209ENST00000554879 DDB2Q92466 427 aa13.27□□□□□ -0.28
PCNX1-209ENST00000554879 NHP2Q9NX24 153 aaKnown RBP13.27□□□□□ -0.28
PCNX1-209ENST00000554879 TRBV9A0A0B4J1U6 114 aa13.27□□□□□ -0.28
PCNX1-209ENST00000554879 A0A1W2PPI3 338 aa13.27□□□□□ -0.28
PCNX1-209ENST00000554879 IGHV4-39P01824 125 aa13.27□□□□□ -0.28
PCNX1-209ENST00000554879 RUSC1-AS1Q66K80 236 aa13.27□□□□□ -0.28
PCNX1-209ENST00000554879 ZNF418Q8TF45 676 aaPredicted RBP13.27□□□□□ -0.28
PCNX1-209ENST00000554879 A0A1W2PPR1 153 aa13.27□□□□□ -0.29
PCNX1-209ENST00000554879 CD300EQ496F6 205 aaPredicted RBP13.27□□□□□ -0.29
PCNX1-209ENST00000554879 DTX2Q86UW9 622 aa13.27□□□□□ -0.29
PCNX1-209ENST00000554879 WFDC3Q8IUB2 231 aa13.27□□□□□ -0.29
PCNX1-209ENST00000554879 LINC00311Q8N616 119 aa13.27□□□□□ -0.29
PCNX1-209ENST00000554879 OR5A1Q8NGJ0 315 aa13.27□□□□□ -0.29
PCNX1-209ENST00000554879 ARPC1AQ92747 370 aa13.27□□□□□ -0.29
PCNX1-209ENST00000554879 TMEM167BQ9NRX6 74 aa13.27□□□□□ -0.29
PCNX1-209ENST00000554879 HIF1ANQ9NWT6 349 aa13.27□□□□□ -0.29
PCNX1-209ENST00000554879 SPATA31B1PQ5VZV4 182 aa13.26□□□□□ -0.29
PCNX1-209ENST00000554879 IGLC1P0CG04 106 aa13.26□□□□□ -0.29
PCNX1-209ENST00000554879 SCGB1C2P0DMR2 95 aa13.26□□□□□ -0.29
PCNX1-209ENST00000554879 RNASE2P10153 161 aaKnown RBP13.26□□□□□ -0.29
PCNX1-209ENST00000554879 MRAP2Q96G30 205 aa13.26□□□□□ -0.29
PCNX1-209ENST00000554879 PAXXQ9BUH6 204 aa13.26□□□□□ -0.29
PCNX1-209ENST00000554879 ZFP36P26651 326 aaKnown RBP13.26□□□□□ -0.29
PCNX1-209ENST00000554879 OR10J3Q5JRS4 329 aa13.26□□□□□ -0.29
PCNX1-209ENST00000554879 KIR3DL3Q8N743 410 aa13.26□□□□□ -0.29
PCNX1-209ENST00000554879 GNB1LQ9BYB4 327 aa13.26□□□□□ -0.29
PCNX1-209ENST00000554879 Q0VG73 95 aa13.25□□□□□ -0.29
PCNX1-209ENST00000554879 DCHS1Q96JQ0 3298 aa13.25□□□□□ -0.29
PCNX1-209ENST00000554879 PRB4P10163 310 aaPredicted RBP13.25□□□□□ -0.29
PCNX1-209ENST00000554879 SEC11AP67812 179 aa13.25□□□□□ -0.29
PCNX1-209ENST00000554879 WT1-ASQ06250 92 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms