RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 MAP1LC3BQ9GZQ8 125 aa0.86□□□□□ -2.27
SCFD1-213ENST00000554776 CASP8AP2Q9UKL3 1982 aa0.85□□□□□ -2.27
SCFD1-213ENST00000554776 MAP1LC3B2A6NCE7 125 aa0.85□□□□□ -2.27
SCFD1-213ENST00000554776 PPP5D1E7EU14 171 aa0.85□□□□□ -2.27
SCFD1-213ENST00000554776 C17orf112F2Z3M2 114 aa0.85□□□□□ -2.27
SCFD1-213ENST00000554776 F8W1H4 67 aa0.85□□□□□ -2.27
SCFD1-213ENST00000554776 M0R2N4 97 aa0.85□□□□□ -2.27
SCFD1-213ENST00000554776 GPR31O00270 319 aa0.85□□□□□ -2.27
SCFD1-213ENST00000554776 HIST1H2BKO60814 126 aa0.85□□□□□ -2.27
SCFD1-213ENST00000554776 ERC2-IT1O76042 136 aa0.85□□□□□ -2.27
SCFD1-213ENST00000554776 HIST1H2BJP06899 126 aa0.85□□□□□ -2.27
SCFD1-213ENST00000554776 OR10J4P0C629 311 aa0.85□□□□□ -2.27
SCFD1-213ENST00000554776 RAB5CP51148 216 aa0.85□□□□□ -2.27
SCFD1-213ENST00000554776 HBBP68871 147 aa0.85□□□□□ -2.27
SCFD1-213ENST00000554776 TNS3Q68CZ2 1445 aa0.85□□□□□ -2.27
SCFD1-213ENST00000554776 DCUN1D2Q6PH85 259 aa0.85□□□□□ -2.27
SCFD1-213ENST00000554776 CROCCP2Q86T23 111 aa0.85□□□□□ -2.27
SCFD1-213ENST00000554776 GKN2Q86XP6 184 aa0.85□□□□□ -2.27
SCFD1-213ENST00000554776 ANGPTL5Q86XS5 388 aa0.85□□□□□ -2.27
SCFD1-213ENST00000554776 STX12Q86Y82 276 aa0.85□□□□□ -2.27
SCFD1-213ENST00000554776 PLEKHB2Q96CS7 222 aa0.85□□□□□ -2.27
SCFD1-213ENST00000554776 MUCL1Q96DR8 90 aa0.85□□□□□ -2.27
SCFD1-213ENST00000554776 BORCS8Q96FH0 119 aa0.85□□□□□ -2.27
SCFD1-213ENST00000554776 MRPL57Q9BQC6 102 aaKnown RBP0.85□□□□□ -2.27
SCFD1-213ENST00000554776 BOLA2Q9H3K6 86 aa0.85□□□□□ -2.27
SCFD1-213ENST00000554776 OTORQ9NRC9 128 aa0.85□□□□□ -2.27
SCFD1-213ENST00000554776 ORMDL1Q9P0S3 153 aa0.85□□□□□ -2.27
SCFD1-213ENST00000554776 CAMSAP2Q08AD1 1489 aa0.85□□□□□ -2.27
SCFD1-213ENST00000554776 E9PCH4 1651 aa0.84□□□□□ -2.27
SCFD1-213ENST00000554776 TECPR2O15040 1411 aa0.84□□□□□ -2.27
SCFD1-213ENST00000554776 C9orf170A2RU37 121 aa0.84□□□□□ -2.27
SCFD1-213ENST00000554776 IFNA4P05014 189 aa0.84□□□□□ -2.27
SCFD1-213ENST00000554776 NUP35Q8NFH5 326 aa0.84□□□□□ -2.27
SCFD1-213ENST00000554776 HYLS1Q96M11 299 aa0.84□□□□□ -2.27
SCFD1-213ENST00000554776 PBRM1Q86U86 1689 aa0.84□□□□□ -2.28
SCFD1-213ENST00000554776 UNC13CQ8NB66 2214 aa0.84□□□□□ -2.28
SCFD1-213ENST00000554776 ADGRB2O60241 1585 aa0.83□□□□□ -2.28
SCFD1-213ENST00000554776 KIAA1549Q9HCM3 1950 aa0.83□□□□□ -2.28
SCFD1-213ENST00000554776 IGHV1-58A0A0C4DH39 117 aa0.83□□□□□ -2.28
SCFD1-213ENST00000554776 C5orf67F2Z3F1 127 aa0.83□□□□□ -2.28
SCFD1-213ENST00000554776 H7BYZ3 331 aa0.83□□□□□ -2.28
SCFD1-213ENST00000554776 CST7O76096 145 aa0.83□□□□□ -2.28
SCFD1-213ENST00000554776 MT-ND6P03923 174 aa0.83□□□□□ -2.28
SCFD1-213ENST00000554776 CXCL8P10145 99 aa0.83□□□□□ -2.28
SCFD1-213ENST00000554776 LRRC18Q8N456 261 aa0.83□□□□□ -2.28
SCFD1-213ENST00000554776 LINC00526Q96FQ7 95 aa0.83□□□□□ -2.28
SCFD1-213ENST00000554776 TAF9BQ9HBM6 251 aa0.83□□□□□ -2.28
SCFD1-213ENST00000554776 V9GYQ6 96 aa0.83□□□□□ -2.28
SCFD1-213ENST00000554776 ALPK3Q96L96 1907 aa0.83□□□□□ -2.28
SCFD1-213ENST00000554776 FRMPD1Q5SYB0 1578 aa0.83□□□□□ -2.28
SCFD1-213ENST00000554776 ROCK1Q13464 1354 aa0.83□□□□□ -2.28
SCFD1-213ENST00000554776 NCAPD3P42695 1498 aa0.82□□□□□ -2.28
SCFD1-213ENST00000554776 TRDV1A0A1B0GX56 115 aa0.82□□□□□ -2.28
SCFD1-213ENST00000554776 hDV103S1A0JD37 113 aa0.82□□□□□ -2.28
SCFD1-213ENST00000554776 H3BRM9 83 aa0.82□□□□□ -2.28
SCFD1-213ENST00000554776 GABARAPH6UMI1 98 aa0.82□□□□□ -2.28
SCFD1-213ENST00000554776 PGRMC1O00264 195 aaKnown RBP0.82□□□□□ -2.28
SCFD1-213ENST00000554776 FABP2P12104 132 aa0.82□□□□□ -2.28
SCFD1-213ENST00000554776 RPL35P42766 123 aaKnown RBP0.82□□□□□ -2.28
SCFD1-213ENST00000554776 DEFB115Q30KQ5 88 aa0.82□□□□□ -2.28
SCFD1-213ENST00000554776 TMEM78Q5T7P6 136 aa0.82□□□□□ -2.28
SCFD1-213ENST00000554776 KRTAP26-1Q6PEX3 210 aa0.82□□□□□ -2.28
SCFD1-213ENST00000554776 LINC00322Q6ZN03 302 aaPredicted RBP0.82□□□□□ -2.28
SCFD1-213ENST00000554776 TEN1Q86WV5 123 aa0.82□□□□□ -2.28
SCFD1-213ENST00000554776 FAM216BQ8N7L0 139 aa0.82□□□□□ -2.28
SCFD1-213ENST00000554776 GRPEL2Q8TAA5 225 aa0.82□□□□□ -2.28
SCFD1-213ENST00000554776 SELENOSQ9BQE4 189 aa0.82□□□□□ -2.28
SCFD1-213ENST00000554776 OR2H1Q9GZK4 316 aa0.82□□□□□ -2.28
SCFD1-213ENST00000554776 TMEM14CQ9P0S9 112 aa0.82□□□□□ -2.28
SCFD1-213ENST00000554776 NAT8BQ9UHF3 227 aa0.82□□□□□ -2.28
SCFD1-213ENST00000554776 MYLKQ15746 1914 aa0.81□□□□□ -2.28
SCFD1-213ENST00000554776 KDM6AO15550 1401 aaPredicted RBP0.81□□□□□ -2.28
SCFD1-213ENST00000554776 YTHDC2Q9H6S0 1430 aaKnown RBP0.81□□□□□ -2.28
SCFD1-213ENST00000554776 COL24A1Q17RW2 1714 aa0.81□□□□□ -2.28
SCFD1-213ENST00000554776 CECR2Q9BXF3 1484 aa0.81□□□□□ -2.28
SCFD1-213ENST00000554776 TRAV5A0A0B4J249 113 aa0.81□□□□□ -2.28
SCFD1-213ENST00000554776 A0A1W2PRE2 83 aa0.81□□□□□ -2.28
SCFD1-213ENST00000554776 H3BQV1 296 aa0.81□□□□□ -2.28
SCFD1-213ENST00000554776 NUPR1O60356 82 aa0.81□□□□□ -2.28
SCFD1-213ENST00000554776 S100A11P31949 105 aa0.81□□□□□ -2.28
SCFD1-213ENST00000554776 PSG9Q00887 426 aa0.81□□□□□ -2.28
SCFD1-213ENST00000554776 ARPINQ7Z6K5 226 aa0.81□□□□□ -2.28
SCFD1-213ENST00000554776 PRR15Q8IV56 129 aa0.81□□□□□ -2.28
SCFD1-213ENST00000554776 OR5AS1Q8N127 324 aa0.81□□□□□ -2.28
SCFD1-213ENST00000554776 RMND5BQ96G75 393 aaPredicted RBP0.81□□□□□ -2.28
SCFD1-213ENST00000554776 LRTM1Q9HBL6 345 aa0.81□□□□□ -2.28
SCFD1-213ENST00000554776 TMEM138Q9NPI0 162 aa0.81□□□□□ -2.28
SCFD1-213ENST00000554776 NIT2Q9NQR4 276 aa0.81□□□□□ -2.28
SCFD1-213ENST00000554776 TRPM1Q7Z4N2 1603 aa0.81□□□□□ -2.28
SCFD1-213ENST00000554776 CHD3Q12873 2000 aaKnown RBP0.81□□□□□ -2.28
SCFD1-213ENST00000554776 SNRNP200O75643 2136 aaKnown RBP0.8□□□□□ -2.28
SCFD1-213ENST00000554776 PTPRFP10586 1907 aa0.8□□□□□ -2.28
SCFD1-213ENST00000554776 EML5Q05BV3 1969 aa0.8□□□□□ -2.28
SCFD1-213ENST00000554776 PHRF1Q9P1Y6 1649 aaKnown RBP0.8□□□□□ -2.28
SCFD1-213ENST00000554776 A0A087WSZ3 146 aa0.8□□□□□ -2.28
SCFD1-213ENST00000554776 TRAV27A0A087WT01 109 aa0.8□□□□□ -2.28
SCFD1-213ENST00000554776 A0A1B0GV72 72 aa0.8□□□□□ -2.28
SCFD1-213ENST00000554776 NCR3O14931 201 aa0.8□□□□□ -2.28
SCFD1-213ENST00000554776 PPYP01298 95 aa0.8□□□□□ -2.28
SCFD1-213ENST00000554776 COX7CP15954 63 aa0.8□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms