RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 CDC34P49427 236 aaPredicted RBP6.66□□□□□ -1.34
TDP1-208ENST00000553989 FAM3BP58499 235 aaPredicted RBP6.66□□□□□ -1.34
TDP1-208ENST00000553989 RPL23P62829 140 aaKnown RBP6.66□□□□□ -1.34
TDP1-208ENST00000553989 RPL19P84098 196 aaKnown RBP6.66□□□□□ -1.34
TDP1-208ENST00000553989 ADIRFQ15847 76 aa6.66□□□□□ -1.34
TDP1-208ENST00000553989 C15orf32Q32M92 178 aa6.66□□□□□ -1.34
TDP1-208ENST00000553989 OR2B11Q5JQS5 317 aa6.66□□□□□ -1.34
TDP1-208ENST00000553989 FAM209BQ5JX69 171 aa6.66□□□□□ -1.34
TDP1-208ENST00000553989 NECAP1Q8NC96 275 aa6.66□□□□□ -1.34
TDP1-208ENST00000553989 OR51G1Q8NGK1 321 aa6.66□□□□□ -1.34
TDP1-208ENST00000553989 OSR1Q8TAX0 266 aaPredicted RBP6.66□□□□□ -1.34
TDP1-208ENST00000553989 C5orf30Q96GV9 206 aa6.66□□□□□ -1.34
TDP1-208ENST00000553989 ZNF430Q9H8G1 570 aaPredicted RBP6.66□□□□□ -1.34
TDP1-208ENST00000553989 ENY2Q9NPA8 101 aa6.66□□□□□ -1.34
TDP1-208ENST00000553989 FKBP11Q9NYL4 201 aa6.66□□□□□ -1.34
TDP1-208ENST00000553989 SELENOKQ9Y6D0 94 aa6.66□□□□□ -1.34
TDP1-208ENST00000553989 URGCP-MRPS24S4R325 110 aa6.66□□□□□ -1.34
TDP1-208ENST00000553989 LYSTQ99698 3801 aa6.65□□□□□ -1.34
TDP1-208ENST00000553989 TRAV9-1A0A075B6T8 112 aa6.65□□□□□ -1.34
TDP1-208ENST00000553989 ZNF320A2RRD8 509 aa6.65□□□□□ -1.34
TDP1-208ENST00000553989 C2orf70A6NJV1 201 aa6.65□□□□□ -1.34
TDP1-208ENST00000553989 C15orf62A8K5M9 175 aa6.65□□□□□ -1.34
TDP1-208ENST00000553989 ZNF785A8K8V0 405 aa6.65□□□□□ -1.34
TDP1-208ENST00000553989 FCGR3BO75015 233 aa6.65□□□□□ -1.34
TDP1-208ENST00000553989 GGCTO75223 188 aaKnown RBP6.65□□□□□ -1.34
TDP1-208ENST00000553989 LY6G6CO95867 125 aa6.65□□□□□ -1.34
TDP1-208ENST00000553989 IGHV3-23P01764 117 aa6.65□□□□□ -1.34
TDP1-208ENST00000553989 EDN2P20800 178 aa6.65□□□□□ -1.34
TDP1-208ENST00000553989 LORP23490 312 aaPredicted RBP6.65□□□□□ -1.34
TDP1-208ENST00000553989 GALR1P47211 349 aa6.65□□□□□ -1.34
TDP1-208ENST00000553989 HSPE1P61604 102 aaKnown RBP6.65□□□□□ -1.34
TDP1-208ENST00000553989 POU2AF1Q16633 256 aa6.65□□□□□ -1.34
TDP1-208ENST00000553989 DEFB114Q30KQ6 69 aa6.65□□□□□ -1.34
TDP1-208ENST00000553989 C10orf55Q5SWW7 151 aa6.65□□□□□ -1.34
TDP1-208ENST00000553989 LINC00322Q6ZN03 302 aaPredicted RBP6.65□□□□□ -1.34
TDP1-208ENST00000553989 MMD2Q8IY49 270 aa6.65□□□□□ -1.34
TDP1-208ENST00000553989 HIST3H2BBQ8N257 126 aa6.65□□□□□ -1.34
TDP1-208ENST00000553989 OR4S2Q8NH73 311 aa6.65□□□□□ -1.34
TDP1-208ENST00000553989 RNASEH2CQ8TDP1 164 aaKnown RBP6.65□□□□□ -1.34
TDP1-208ENST00000553989 FRZBQ92765 325 aa6.65□□□□□ -1.34
TDP1-208ENST00000553989 TECRQ9NZ01 308 aaKnown RBP6.65□□□□□ -1.34
TDP1-208ENST00000553989 LY96Q9Y6Y9 160 aa6.65□□□□□ -1.34
TDP1-208ENST00000553989 ARL2-SNX15V9GYD0 113 aa6.65□□□□□ -1.34
TDP1-208ENST00000553989 CSMD3Q7Z407 3707 aa6.64□□□□□ -1.35
TDP1-208ENST00000553989 TRBV9A0A0B4J1U6 114 aa6.64□□□□□ -1.35
TDP1-208ENST00000553989 LINC00473A8K010 186 aa6.64□□□□□ -1.35
TDP1-208ENST00000553989 C11orf94C9JXX5 98 aa6.64□□□□□ -1.35
TDP1-208ENST00000553989 PAGE4O60829 102 aa6.64□□□□□ -1.35
TDP1-208ENST00000553989 GCGP01275 180 aa6.64□□□□□ -1.35
TDP1-208ENST00000553989 HIST1H1BP16401 226 aaKnown RBP6.64□□□□□ -1.35
TDP1-208ENST00000553989 ARL3P36405 182 aa6.64□□□□□ -1.35
TDP1-208ENST00000553989 RPL29P47914 159 aaKnown RBP6.64□□□□□ -1.35
TDP1-208ENST00000553989 RHOBP62745 196 aa6.64□□□□□ -1.35
TDP1-208ENST00000553989 MRGPRG-AS1Q2M3A8 158 aa6.64□□□□□ -1.35
TDP1-208ENST00000553989 SSX7Q7RTT5 188 aa6.64□□□□□ -1.35
TDP1-208ENST00000553989 TMEM183AQ8IXX5 376 aa6.64□□□□□ -1.35
TDP1-208ENST00000553989 TTC9CQ8N5M4 171 aa6.64□□□□□ -1.35
TDP1-208ENST00000553989 OR10D4PQ8NGN7 298 aa6.64□□□□□ -1.35
TDP1-208ENST00000553989 OR4X1Q8NH49 305 aa6.64□□□□□ -1.35
TDP1-208ENST00000553989 CACNG8Q8WXS5 425 aa6.64□□□□□ -1.35
TDP1-208ENST00000553989 DDB2Q92466 427 aa6.64□□□□□ -1.35
TDP1-208ENST00000553989 RPUSD4Q96CM3 377 aaKnown RBP6.64□□□□□ -1.35
TDP1-208ENST00000553989 UHRF2Q96PU4 802 aa6.64□□□□□ -1.35
TDP1-208ENST00000553989 GGTLC1Q9BX51 225 aa6.64□□□□□ -1.35
TDP1-208ENST00000553989 QTRT1Q9BXR0 403 aaKnown RBP6.64□□□□□ -1.35
TDP1-208ENST00000553989 PARLQ9H300 379 aa6.64□□□□□ -1.35
TDP1-208ENST00000553989 FBXL7Q9UJT9 491 aa6.64□□□□□ -1.35
TDP1-208ENST00000553989 PRNDQ9UKY0 176 aa6.64□□□□□ -1.35
TDP1-208ENST00000553989 ZNF257Q9Y2Q1 563 aa6.64□□□□□ -1.35
TDP1-208ENST00000553989 S4R3C0 116 aa6.64□□□□□ -1.35
TDP1-208ENST00000553989 LOC102724200A0A096LPH7 203 aaPredicted RBP6.63□□□□□ -1.35
TDP1-208ENST00000553989 LINC00587B1AMM8 73 aa6.63□□□□□ -1.35
TDP1-208ENST00000553989 PHOX2AO14813 284 aa6.63□□□□□ -1.35
TDP1-208ENST00000553989 STAG3L2P0CL84 134 aa6.63□□□□□ -1.35
TDP1-208ENST00000553989 STAG3L3P0CL85 134 aa6.63□□□□□ -1.35
TDP1-208ENST00000553989 DEFA4P12838 97 aa6.63□□□□□ -1.35
TDP1-208ENST00000553989 AREGP15514 252 aa6.63□□□□□ -1.35
TDP1-208ENST00000553989 RPL27AP46776 148 aaKnown RBP6.63□□□□□ -1.35
TDP1-208ENST00000553989 PKIAP61925 76 aa6.63□□□□□ -1.35
TDP1-208ENST00000553989 COX19Q49B96 90 aa6.63□□□□□ -1.35
TDP1-208ENST00000553989 FAM106AQ4KMX7 169 aa6.63□□□□□ -1.35
TDP1-208ENST00000553989 CLEC19AQ6UXS0 136 aa6.63□□□□□ -1.35
TDP1-208ENST00000553989 C19orf35Q6ZS72 473 aa6.63□□□□□ -1.35
TDP1-208ENST00000553989 TMEM61Q8N0U2 210 aa6.63□□□□□ -1.35
TDP1-208ENST00000553989 VKORC1L1Q8N0U8 176 aa6.63□□□□□ -1.35
TDP1-208ENST00000553989 VSTM2AQ8TAG5 236 aa6.63□□□□□ -1.35
TDP1-208ENST00000553989 TMEM170AQ8WVE7 144 aa6.63□□□□□ -1.35
TDP1-208ENST00000553989 LINC00476Q8WZB0 136 aa6.63□□□□□ -1.35
TDP1-208ENST00000553989 EEF1AKMT3Q96AZ1 226 aa6.63□□□□□ -1.35
TDP1-208ENST00000553989 AP5S1Q9NUS5 200 aa6.63□□□□□ -1.35
TDP1-208ENST00000553989 LGALS9O00182 355 aa6.62□□□□□ -1.35
TDP1-208ENST00000553989 CBLN1P23435 193 aa6.62□□□□□ -1.35
TDP1-208ENST00000553989 JOSD1Q15040 202 aaPredicted RBP6.62□□□□□ -1.35
TDP1-208ENST00000553989 CST9LP1Q5W188 147 aa6.62□□□□□ -1.35
TDP1-208ENST00000553989 OR4A47Q6IF82 309 aa6.62□□□□□ -1.35
TDP1-208ENST00000553989 TEPPQ6URK8 271 aa6.62□□□□□ -1.35
TDP1-208ENST00000553989 RBPMS2Q6ZRY4 209 aaKnown RBP6.62□□□□□ -1.35
TDP1-208ENST00000553989 SSX9Q7RTT3 188 aa6.62□□□□□ -1.35
TDP1-208ENST00000553989 OR1P1Q8NH06 330 aa6.62□□□□□ -1.35
TDP1-208ENST00000553989 TMEM18Q96B42 140 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms