RNA–Protein interactions for RNA: ENST00000553544.1

SRP54-203, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-203ENST00000553544 C12orf74Q32Q52 190 aa8.47□□□□□ -1.05
SRP54-203ENST00000553544 LRRC37A5PQ49AS3 106 aa8.47□□□□□ -1.05
SRP54-203ENST00000553544 FOXI2Q6ZQN5 318 aa8.47□□□□□ -1.05
SRP54-203ENST00000553544 Q6ZRG5 221 aa8.47□□□□□ -1.05
SRP54-203ENST00000553544 TMEM252Q8N6L7 170 aa8.47□□□□□ -1.05
SRP54-203ENST00000553544 LINC00052Q96N35 136 aa8.47□□□□□ -1.05
SRP54-203ENST00000553544 C1QTNF4Q9BXJ3 329 aa8.47□□□□□ -1.05
SRP54-203ENST00000553544 SAV1Q9H4B6 383 aaPredicted RBP8.47□□□□□ -1.05
SRP54-203ENST00000553544 ALG5Q9Y673 324 aa8.47□□□□□ -1.05
SRP54-203ENST00000553544 DNAH11Q96DT5 4516 aa8.47□□□□□ -1.05
SRP54-203ENST00000553544 DYNC1H1Q14204 4646 aaKnown RBP8.47□□□□□ -1.05
SRP54-203ENST00000553544 FAM24AA6NFZ4 105 aa8.46□□□□□ -1.06
SRP54-203ENST00000553544 H3BRN7 92 aa8.46□□□□□ -1.06
SRP54-203ENST00000553544 LINC00869P0C866 280 aa8.46□□□□□ -1.06
SRP54-203ENST00000553544 OR1B1Q8NGR6 318 aa8.46□□□□□ -1.06
SRP54-203ENST00000553544 THAP6Q8TBB0 222 aa8.46□□□□□ -1.06
SRP54-203ENST00000553544 PFDN5Q99471 154 aa8.46□□□□□ -1.06
SRP54-203ENST00000553544 C11orf1Q9H5F2 150 aa8.46□□□□□ -1.06
SRP54-203ENST00000553544 HIGD1AQ9Y241 93 aa8.46□□□□□ -1.06
SRP54-203ENST00000553544 IGLV2-18A0A075B6J9 118 aa8.45□□□□□ -1.06
SRP54-203ENST00000553544 HYPMO75409 117 aa8.45□□□□□ -1.06
SRP54-203ENST00000553544 CST7O76096 145 aa8.45□□□□□ -1.06
SRP54-203ENST00000553544 SIX6O95475 246 aa8.45□□□□□ -1.06
SRP54-203ENST00000553544 MPC2O95563 127 aa8.45□□□□□ -1.06
SRP54-203ENST00000553544 RPL7P18124 248 aaKnown RBP8.45□□□□□ -1.06
SRP54-203ENST00000553544 CAMLGP49069 296 aa8.45□□□□□ -1.06
SRP54-203ENST00000553544 H2BFSP57053 126 aa8.45□□□□□ -1.06
SRP54-203ENST00000553544 SPATA31B1PQ5VZV4 182 aa8.45□□□□□ -1.06
SRP54-203ENST00000553544 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.45□□□□□ -1.06
SRP54-203ENST00000553544 ZNF705AQ6ZN79 300 aaPredicted RBP8.45□□□□□ -1.06
SRP54-203ENST00000553544 Q6ZR54 194 aa8.45□□□□□ -1.06
SRP54-203ENST00000553544 ZNF767PQ75MW2 155 aa8.45□□□□□ -1.06
SRP54-203ENST00000553544 UBE2DNLQ8IWF7 75 aa8.45□□□□□ -1.06
SRP54-203ENST00000553544 ZNF709Q8N972 641 aa8.45□□□□□ -1.06
SRP54-203ENST00000553544 OR1L4Q8NGR5 311 aa8.45□□□□□ -1.06
SRP54-203ENST00000553544 C20orf173Q96LM9 149 aa8.45□□□□□ -1.06
SRP54-203ENST00000553544 SHANK2-AS3Q9BTD1 123 aa8.45□□□□□ -1.06
SRP54-203ENST00000553544 RSG1Q9BU20 258 aa8.45□□□□□ -1.06
SRP54-203ENST00000553544 SLC25A39Q9BZJ4 359 aaPredicted RBP8.45□□□□□ -1.06
SRP54-203ENST00000553544 SLC25A22Q9H936 323 aa8.45□□□□□ -1.06
SRP54-203ENST00000553544 XCL2Q9UBD3 114 aa8.45□□□□□ -1.06
SRP54-203ENST00000553544 A0A0J9YX75 114 aa8.44□□□□□ -1.06
SRP54-203ENST00000553544 UBE2L5PA0A1B0GUS4 154 aa8.44□□□□□ -1.06
SRP54-203ENST00000553544 A8MTW9 85 aa8.44□□□□□ -1.06
SRP54-203ENST00000553544 ZNF705FA8MVS1 300 aaPredicted RBP8.44□□□□□ -1.06
SRP54-203ENST00000553544 AGPAT2O15120 278 aa8.44□□□□□ -1.06
SRP54-203ENST00000553544 CDK2AP2O75956 126 aa8.44□□□□□ -1.06
SRP54-203ENST00000553544 ZNF705DP0CH99 300 aaPredicted RBP8.44□□□□□ -1.06
SRP54-203ENST00000553544 ZNF705BP0CI00 300 aaPredicted RBP8.44□□□□□ -1.06
SRP54-203ENST00000553544 VWC2Q2TAL6 325 aa8.44□□□□□ -1.06
SRP54-203ENST00000553544 C1orf134Q5TEV5 83 aa8.44□□□□□ -1.06
SRP54-203ENST00000553544 PATE2Q6UY27 113 aa8.44□□□□□ -1.06
SRP54-203ENST00000553544 MAPKAPK5-AS1Q8N8E1 139 aa8.44□□□□□ -1.06
SRP54-203ENST00000553544 C16orf92Q96LL3 132 aa8.44□□□□□ -1.06
SRP54-203ENST00000553544 NEU1Q99519 415 aa8.44□□□□□ -1.06
SRP54-203ENST00000553544 SCRT1Q9BWW7 348 aa8.44□□□□□ -1.06
SRP54-203ENST00000553544 RPRMQ9NS64 109 aa8.44□□□□□ -1.06
SRP54-203ENST00000553544 DOK5Q9P104 306 aa8.44□□□□□ -1.06
SRP54-203ENST00000553544 CELA1Q9UNI1 258 aa8.44□□□□□ -1.06
SRP54-203ENST00000553544 TRAV8-2A0A0B4J237 113 aa8.43□□□□□ -1.06
SRP54-203ENST00000553544 IGSF23A1L1A6 192 aa8.43□□□□□ -1.06
SRP54-203ENST00000553544 C17orf112F2Z3M2 114 aa8.43□□□□□ -1.06
SRP54-203ENST00000553544 F6UB75 175 aa8.43□□□□□ -1.06
SRP54-203ENST00000553544 COX7A2P2O60397 106 aa8.43□□□□□ -1.06
SRP54-203ENST00000553544 IGKV3-20P01619 116 aa8.43□□□□□ -1.06
SRP54-203ENST00000553544 GIPP09681 153 aaPredicted RBP8.43□□□□□ -1.06
SRP54-203ENST00000553544 OR5G3P0C626 314 aa8.43□□□□□ -1.06
SRP54-203ENST00000553544 OXA1LQ15070 435 aa8.43□□□□□ -1.06
SRP54-203ENST00000553544 OR5C1Q8NGR4 320 aa8.43□□□□□ -1.06
SRP54-203ENST00000553544 UHRF2Q96PU4 802 aa8.43□□□□□ -1.06
SRP54-203ENST00000553544 ARL6Q9H0F7 186 aa8.43□□□□□ -1.06
SRP54-203ENST00000553544 WDR83OSQ9Y284 106 aa8.43□□□□□ -1.06
SRP54-203ENST00000553544 A0A087X0K7 114 aa8.42□□□□□ -1.06
SRP54-203ENST00000553544 C16orf90A8MZG2 172 aa8.42□□□□□ -1.06
SRP54-203ENST00000553544 MRPS12O15235 138 aaKnown RBP8.42□□□□□ -1.06
SRP54-203ENST00000553544 IFNA5P01569 189 aa8.42□□□□□ -1.06
SRP54-203ENST00000553544 FGF7P21781 194 aa8.42□□□□□ -1.06
SRP54-203ENST00000553544 RPL29P47914 159 aaKnown RBP8.42□□□□□ -1.06
SRP54-203ENST00000553544 B2MP61769 119 aa8.42□□□□□ -1.06
SRP54-203ENST00000553544 PSG9Q00887 426 aa8.42□□□□□ -1.06
SRP54-203ENST00000553544 RNF212Q495C1 297 aa8.42□□□□□ -1.06
SRP54-203ENST00000553544 FAM78BQ5VT40 261 aa8.42□□□□□ -1.06
SRP54-203ENST00000553544 EBLN2Q6P2I7 272 aa8.42□□□□□ -1.06
SRP54-203ENST00000553544 AMTNQ6UX39 209 aa8.42□□□□□ -1.06
SRP54-203ENST00000553544 OR4B1Q8NGF8 309 aa8.42□□□□□ -1.06
SRP54-203ENST00000553544 CHAC2Q8WUX2 184 aa8.42□□□□□ -1.06
SRP54-203ENST00000553544 FAM210BQ96KR6 192 aa8.42□□□□□ -1.06
SRP54-203ENST00000553544 SLC35B3Q9H1N7 401 aa8.42□□□□□ -1.06
SRP54-203ENST00000553544 ARV1Q9H2C2 271 aa8.42□□□□□ -1.06
SRP54-203ENST00000553544 OR5AC2Q9NZP5 309 aa8.42□□□□□ -1.06
SRP54-203ENST00000553544 MBD2Q9UBB5 411 aa8.42□□□□□ -1.06
SRP54-203ENST00000553544 HSPG2P98160 4391 aa8.42□□□□□ -1.06
SRP54-203ENST00000553544 SMIM9A6NGZ8 99 aa8.41□□□□□ -1.06
SRP54-203ENST00000553544 SPART-AS1P0CW21 52 aa8.41□□□□□ -1.06
SRP54-203ENST00000553544 RPL12P30050 165 aaKnown RBP8.41□□□□□ -1.06
SRP54-203ENST00000553544 FXYD7P58549 80 aa8.41□□□□□ -1.06
SRP54-203ENST00000553544 ZNF266Q14584 549 aa8.41□□□□□ -1.06
SRP54-203ENST00000553544 OPCMLQ14982 345 aa8.41□□□□□ -1.06
SRP54-203ENST00000553544 IGFL4Q6B9Z1 124 aa8.41□□□□□ -1.06
SRP54-203ENST00000553544 TMEM37Q8WXS4 190 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms