RNA–Protein interactions for RNA: ENST00000553491.5

ATXN3-220, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 857 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-220ENST00000553491 ZFP69Q49AA0 526 aa3.49□□□□□ -1.85
ATXN3-220ENST00000553491 PRSS54Q6PEW0 395 aa3.49□□□□□ -1.85
ATXN3-220ENST00000553491 TOMM20LQ6UXN7 152 aa3.49□□□□□ -1.85
ATXN3-220ENST00000553491 SIGLEC15Q6ZMC9 328 aa3.49□□□□□ -1.85
ATXN3-220ENST00000553491 ADAMTSL5Q6ZMM2 481 aa3.49□□□□□ -1.85
ATXN3-220ENST00000553491 ZNF600Q6ZNG1 722 aa3.49□□□□□ -1.85
ATXN3-220ENST00000553491 TCF24Q7RTU0 167 aa3.49□□□□□ -1.85
ATXN3-220ENST00000553491 SLC16A13Q7RTY0 426 aa3.49□□□□□ -1.85
ATXN3-220ENST00000553491 NOTCH2NLQ7Z3S9 236 aa3.49□□□□□ -1.85
ATXN3-220ENST00000553491 COX8CQ7Z4L0 72 aa3.49□□□□□ -1.85
ATXN3-220ENST00000553491 TCTE3Q8IZS6 198 aa3.49□□□□□ -1.85
ATXN3-220ENST00000553491 DEFB125Q8N687 156 aa3.49□□□□□ -1.85
ATXN3-220ENST00000553491 OR10G8Q8NGN5 311 aa3.49□□□□□ -1.85
ATXN3-220ENST00000553491 OR1S2Q8NGQ3 325 aa3.49□□□□□ -1.85
ATXN3-220ENST00000553491 RNASEH2CQ8TDP1 164 aaKnown RBP3.49□□□□□ -1.85
ATXN3-220ENST00000553491 CIB3Q96Q77 187 aaPredicted RBP3.49□□□□□ -1.85
ATXN3-220ENST00000553491 METTL26Q96S19 204 aa3.49□□□□□ -1.85
ATXN3-220ENST00000553491 RHPN1-AS1Q9BWJ2 59 aa3.49□□□□□ -1.85
ATXN3-220ENST00000553491 ZNF436Q9C0F3 470 aaPredicted RBP3.49□□□□□ -1.85
ATXN3-220ENST00000553491 FNDC4Q9H6D8 234 aaPredicted RBP3.49□□□□□ -1.85
ATXN3-220ENST00000553491 DAZ1Q9NQZ3 744 aaKnown RBP3.49□□□□□ -1.85
ATXN3-220ENST00000553491 MRPL36Q9P0J6 103 aaKnown RBP3.49□□□□□ -1.85
ATXN3-220ENST00000553491 SMPXQ9UHP9 88 aa3.49□□□□□ -1.85
ATXN3-220ENST00000553491 RABAC1Q9UI14 185 aa3.49□□□□□ -1.85
ATXN3-220ENST00000553491 TBC1D24Q9ULP9 559 aa3.49□□□□□ -1.85
ATXN3-220ENST00000553491 RCL1Q9Y2P8 373 aaKnown RBP3.49□□□□□ -1.85
ATXN3-220ENST00000553491 PYGO1Q9Y3Y4 419 aa3.49□□□□□ -1.85
ATXN3-220ENST00000553491 DNHD1Q96M86 4753 aa3.49□□□□□ -1.85
ATXN3-220ENST00000553491 TRRAPQ9Y4A5 3859 aa3.49□□□□□ -1.85
ATXN3-220ENST00000553491 A0A087X0K7 114 aa3.48□□□□□ -1.85
ATXN3-220ENST00000553491 IGHV7-4-1A0A0J9YVY3 117 aa3.48□□□□□ -1.85
ATXN3-220ENST00000553491 TMEM213A2RRL7 107 aa3.48□□□□□ -1.85
ATXN3-220ENST00000553491 SNRPGP15A8MWD9 76 aa3.48□□□□□ -1.85
ATXN3-220ENST00000553491 K7EMT4 169 aa3.48□□□□□ -1.85
ATXN3-220ENST00000553491 CHEK1O14757 476 aa3.48□□□□□ -1.85
ATXN3-220ENST00000553491 PITX3O75364 302 aa3.48□□□□□ -1.85
ATXN3-220ENST00000553491 RLN2P04090 185 aa3.48□□□□□ -1.85
ATXN3-220ENST00000553491 IL4P05112 153 aa3.48□□□□□ -1.85
ATXN3-220ENST00000553491 FABP1P07148 127 aa3.48□□□□□ -1.85
ATXN3-220ENST00000553491 CD7P09564 240 aa3.48□□□□□ -1.85
ATXN3-220ENST00000553491 METTL15P1P0C7V9 234 aa3.48□□□□□ -1.85
ATXN3-220ENST00000553491 SLC25A6P12236 298 aa3.48□□□□□ -1.85
ATXN3-220ENST00000553491 RPL35AP18077 110 aaKnown RBP3.48□□□□□ -1.85
ATXN3-220ENST00000553491 ORM2P19652 201 aa3.48□□□□□ -1.85
ATXN3-220ENST00000553491 PVALBP20472 110 aaPredicted RBP3.48□□□□□ -1.85
ATXN3-220ENST00000553491 FCGR2BP31994 310 aaPredicted RBP3.48□□□□□ -1.85
ATXN3-220ENST00000553491 BMI1P35226 326 aa3.48□□□□□ -1.85
ATXN3-220ENST00000553491 GPX4P36969 197 aaPredicted RBP3.48□□□□□ -1.85
ATXN3-220ENST00000553491 CAV2P51636 162 aa3.48□□□□□ -1.85
ATXN3-220ENST00000553491 LYZP61626 148 aa3.48□□□□□ -1.85
ATXN3-220ENST00000553491 ZNF90Q03938 601 aa3.48□□□□□ -1.85
ATXN3-220ENST00000553491 SRSF9Q13242 221 aaKnown RBP eCLIP3.48□□□□□ -1.85
ATXN3-220ENST00000553491 GAMTQ14353 236 aa3.48□□□□□ -1.85
ATXN3-220ENST00000553491 LRRC37A5PQ49AS3 106 aa3.48□□□□□ -1.85
ATXN3-220ENST00000553491 AARDQ4LEZ3 155 aa3.48□□□□□ -1.85
ATXN3-220ENST00000553491 ZNF767PQ75MW2 155 aa3.48□□□□□ -1.85
ATXN3-220ENST00000553491 TMEM61Q8N0U2 210 aa3.48□□□□□ -1.85
ATXN3-220ENST00000553491 STXBP6Q8NFX7 210 aa3.48□□□□□ -1.85
ATXN3-220ENST00000553491 OR51G1Q8NGK1 321 aa3.48□□□□□ -1.85
ATXN3-220ENST00000553491 OR2K2Q8NGT1 345 aa3.48□□□□□ -1.85
ATXN3-220ENST00000553491 OR4X1Q8NH49 305 aa3.48□□□□□ -1.85
ATXN3-220ENST00000553491 MITD1Q8WV92 249 aa3.48□□□□□ -1.85
ATXN3-220ENST00000553491 MARC2Q969Z3 335 aa3.48□□□□□ -1.85
ATXN3-220ENST00000553491 SMIM8Q96KF7 97 aa3.48□□□□□ -1.85
ATXN3-220ENST00000553491 C2orf50Q96LR7 162 aa3.48□□□□□ -1.85
ATXN3-220ENST00000553491 RNF2Q99496 336 aa3.48□□□□□ -1.85
ATXN3-220ENST00000553491 LITAFQ99732 161 aa3.48□□□□□ -1.85
ATXN3-220ENST00000553491 TMEM231Q9H6L2 316 aa3.48□□□□□ -1.85
ATXN3-220ENST00000553491 NACAE9PAV3 2078 aa3.48□□□□□ -1.85
ATXN3-220ENST00000553491 A0A087X002 238 aa3.47□□□□□ -1.85
ATXN3-220ENST00000553491 TRAV25A0A0B4J276 109 aa3.47□□□□□ -1.85
ATXN3-220ENST00000553491 FAM24AA6NFZ4 105 aa3.47□□□□□ -1.85
ATXN3-220ENST00000553491 OR4C46A6NHA9 309 aa3.47□□□□□ -1.85
ATXN3-220ENST00000553491 INS-IGF2F8WCM5 200 aa3.47□□□□□ -1.85
ATXN3-220ENST00000553491 CST7O76096 145 aa3.47□□□□□ -1.85
ATXN3-220ENST00000553491 GAS8-AS1O95177 125 aa3.47□□□□□ -1.85
ATXN3-220ENST00000553491 C1QBP02746 253 aa3.47□□□□□ -1.85
ATXN3-220ENST00000553491 IL5P05113 134 aa3.47□□□□□ -1.85
ATXN3-220ENST00000553491 OR5G3P0C626 314 aa3.47□□□□□ -1.85
ATXN3-220ENST00000553491 M6PRP20645 277 aa3.47□□□□□ -1.85
ATXN3-220ENST00000553491 GATA2P23769 480 aaPredicted RBP3.47□□□□□ -1.85
ATXN3-220ENST00000553491 XGP55808 180 aa3.47□□□□□ -1.85
ATXN3-220ENST00000553491 ATP5IP56385 69 aaPredicted RBP3.47□□□□□ -1.85
ATXN3-220ENST00000553491 IFITM2Q01629 132 aa3.47□□□□□ -1.85
ATXN3-220ENST00000553491 FGL1Q08830 312 aa3.47□□□□□ -1.85
ATXN3-220ENST00000553491 KLK9Q2XQG4 91 aa3.47□□□□□ -1.85
ATXN3-220ENST00000553491 ADAMTSL4-AS1Q5T5F5 129 aa3.47□□□□□ -1.85
ATXN3-220ENST00000553491 APRG1Q8IVJ8 170 aa3.47□□□□□ -1.85
ATXN3-220ENST00000553491 SBSPONQ8IVN8 264 aa3.47□□□□□ -1.85
ATXN3-220ENST00000553491 OR10P1Q8NGE3 313 aa3.47□□□□□ -1.85
ATXN3-220ENST00000553491 OR4D5Q8NGN0 318 aa3.47□□□□□ -1.85
ATXN3-220ENST00000553491 OR1B1Q8NGR6 318 aa3.47□□□□□ -1.85
ATXN3-220ENST00000553491 RNASE8Q8TDE3 154 aaKnown RBP3.47□□□□□ -1.85
ATXN3-220ENST00000553491 C2orf48Q96LS8 159 aa3.47□□□□□ -1.85
ATXN3-220ENST00000553491 HYLS1Q96M11 299 aa3.47□□□□□ -1.85
ATXN3-220ENST00000553491 FAM218AQ96MZ4 157 aa3.47□□□□□ -1.85
ATXN3-220ENST00000553491 LINC00052Q96N35 136 aa3.47□□□□□ -1.85
ATXN3-220ENST00000553491 RAB40CQ96S21 281 aa3.47□□□□□ -1.85
ATXN3-220ENST00000553491 ATP6V0BQ99437 205 aa3.47□□□□□ -1.85
ATXN3-220ENST00000553491 B9D2Q9BPU9 175 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms