RNA–Protein interactions for RNA: ENST00000549970.5

VPS29-207, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 818 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-207ENST00000549970 LINC00305Q7Z4B0 112 aa11.64□□□□□ -0.55
VPS29-207ENST00000549970 BAP18Q8IXM2 172 aa11.64□□□□□ -0.55
VPS29-207ENST00000549970 MGST2Q99735 147 aa11.64□□□□□ -0.55
VPS29-207ENST00000549970 CCDC32Q9BV29 185 aa11.64□□□□□ -0.55
VPS29-207ENST00000549970 TRAV12-2A0A075B6T6 113 aa11.63□□□□□ -0.55
VPS29-207ENST00000549970 MRPS12O15235 138 aaKnown RBP11.63□□□□□ -0.55
VPS29-207ENST00000549970 CRXO43186 299 aaPredicted RBP11.63□□□□□ -0.55
VPS29-207ENST00000549970 PRM2P04554 102 aa11.63□□□□□ -0.55
VPS29-207ENST00000549970 H2AFB2P0C5Z0 115 aa11.63□□□□□ -0.55
VPS29-207ENST00000549970 P0DMU3 169 aa11.63□□□□□ -0.55
VPS29-207ENST00000549970 FAM231AP0DMU4 169 aa11.63□□□□□ -0.55
VPS29-207ENST00000549970 FAM231CP0DMU5 169 aa11.63□□□□□ -0.55
VPS29-207ENST00000549970 RHOBP62745 196 aa11.63□□□□□ -0.55
VPS29-207ENST00000549970 PSG3Q16557 428 aa11.63□□□□□ -0.55
VPS29-207ENST00000549970 PXDC1Q5TGL8 231 aa11.63□□□□□ -0.55
VPS29-207ENST00000549970 C12orf45Q8N5I9 185 aaPredicted RBP11.63□□□□□ -0.55
VPS29-207ENST00000549970 OR8A1Q8NGG7 326 aa11.63□□□□□ -0.55
VPS29-207ENST00000549970 RNF24Q9Y225 148 aa11.63□□□□□ -0.55
VPS29-207ENST00000549970 FAT2Q9NYQ8 4349 aa11.63□□□□□ -0.55
VPS29-207ENST00000549970 FAM240BA0A1B0GVZ2 78 aa11.62□□□□□ -0.55
VPS29-207ENST00000549970 FAM24AA6NFZ4 105 aa11.62□□□□□ -0.55
VPS29-207ENST00000549970 ZNF705GA8MUZ8 300 aaPredicted RBP11.62□□□□□ -0.55
VPS29-207ENST00000549970 BOLA2-SMG1P6H3BVE0 249 aa11.62□□□□□ -0.55
VPS29-207ENST00000549970 COX7A2P2O60397 106 aa11.62□□□□□ -0.55
VPS29-207ENST00000549970 CST7O76096 145 aa11.62□□□□□ -0.55
VPS29-207ENST00000549970 S100A10P60903 97 aa11.62□□□□□ -0.55
VPS29-207ENST00000549970 C2orf50Q96LR7 162 aa11.62□□□□□ -0.55
VPS29-207ENST00000549970 PPP1R14DQ9NXH3 145 aa11.62□□□□□ -0.55
VPS29-207ENST00000549970 CAMLGP49069 296 aa11.61□□□□□ -0.55
VPS29-207ENST00000549970 DAD1P61803 113 aa11.61□□□□□ -0.55
VPS29-207ENST00000549970 LCN15Q6UWW0 184 aa11.61□□□□□ -0.55
VPS29-207ENST00000549970 POM121L12Q8N7R1 296 aa11.61□□□□□ -0.55
VPS29-207ENST00000549970 TMEM37Q8WXS4 190 aa11.61□□□□□ -0.55
VPS29-207ENST00000549970 RPUSD4Q96CM3 377 aaKnown RBP11.61□□□□□ -0.55
VPS29-207ENST00000549970 C11orf1Q9H5F2 150 aa11.61□□□□□ -0.55
VPS29-207ENST00000549970 H3BTX0 84 aa11.6□□□□□ -0.55
VPS29-207ENST00000549970 PVALBP20472 110 aaPredicted RBP11.6□□□□□ -0.55
VPS29-207ENST00000549970 RAB31Q13636 194 aa11.6□□□□□ -0.55
VPS29-207ENST00000549970 OXA1LQ15070 435 aa11.6□□□□□ -0.55
VPS29-207ENST00000549970 MORN5Q5VZ52 161 aa11.6□□□□□ -0.55
VPS29-207ENST00000549970 C10orf113Q5VZT2 155 aa11.6□□□□□ -0.55
VPS29-207ENST00000549970 MIC13Q5XKP0 118 aa11.6□□□□□ -0.55
VPS29-207ENST00000549970 NRARPQ7Z6K4 114 aa11.6□□□□□ -0.55
VPS29-207ENST00000549970 BPIFA4PQ86YQ2 179 aa11.6□□□□□ -0.55
VPS29-207ENST00000549970 SLC50A1Q9BRV3 221 aa11.6□□□□□ -0.55
VPS29-207ENST00000549970 ZNF331Q9NQX6 463 aaPredicted RBP11.6□□□□□ -0.55
VPS29-207ENST00000549970 UQCC1Q9NVA1 299 aa11.6□□□□□ -0.55
VPS29-207ENST00000549970 DNAH17Q9UFH2 4485 aa11.6□□□□□ -0.55
VPS29-207ENST00000549970 CXCL2P19875 107 aa11.59□□□□□ -0.55
VPS29-207ENST00000549970 B2MP61769 119 aa11.59□□□□□ -0.55
VPS29-207ENST00000549970 RAB32Q13637 225 aa11.59□□□□□ -0.55
VPS29-207ENST00000549970 OPCMLQ14982 345 aa11.59□□□□□ -0.55
VPS29-207ENST00000549970 MZT2BQ6NZ67 158 aa11.59□□□□□ -0.55
VPS29-207ENST00000549970 Q6ZRG5 221 aa11.59□□□□□ -0.55
VPS29-207ENST00000549970 FAM210BQ96KR6 192 aa11.59□□□□□ -0.55
VPS29-207ENST00000549970 LINC01587Q99440 93 aa11.59□□□□□ -0.55
VPS29-207ENST00000549970 LYRM2Q9NU23 88 aaPredicted RBP11.59□□□□□ -0.55
VPS29-207ENST00000549970 UBE2L5PA0A1B0GUS4 154 aa11.58□□□□□ -0.56
VPS29-207ENST00000549970 SLC17A3O00476 420 aa11.58□□□□□ -0.56
VPS29-207ENST00000549970 UBE2DNLQ8IWF7 75 aa11.58□□□□□ -0.56
VPS29-207ENST00000549970 S100ZQ8WXG8 99 aa11.58□□□□□ -0.56
VPS29-207ENST00000549970 DNAJC4Q9NNZ3 241 aa11.58□□□□□ -0.56
VPS29-207ENST00000549970 WDR83OSQ9Y284 106 aa11.58□□□□□ -0.56
VPS29-207ENST00000549970 IGSF23A1L1A6 192 aa11.57□□□□□ -0.56
VPS29-207ENST00000549970 M0R2N4 97 aa11.57□□□□□ -0.56
VPS29-207ENST00000549970 IGLC2P0DOY2 106 aa11.57□□□□□ -0.56
VPS29-207ENST00000549970 HTN1P15515 57 aa11.57□□□□□ -0.56
VPS29-207ENST00000549970 AZU1P20160 251 aa11.57□□□□□ -0.56
VPS29-207ENST00000549970 SULT1A1P50225 295 aa11.57□□□□□ -0.56
VPS29-207ENST00000549970 BAXQ07812 192 aa11.57□□□□□ -0.56
VPS29-207ENST00000549970 IL15RAQ13261 267 aa11.57□□□□□ -0.56
VPS29-207ENST00000549970 TMEM88Q6PEY1 159 aa11.57□□□□□ -0.56
VPS29-207ENST00000549970 STX12Q86Y82 276 aa11.57□□□□□ -0.56
VPS29-207ENST00000549970 TMEM252Q8N6L7 170 aa11.57□□□□□ -0.56
VPS29-207ENST00000549970 TRAV5A0A0B4J249 113 aa11.56□□□□□ -0.56
VPS29-207ENST00000549970 LYRM9A8MSI8 78 aa11.56□□□□□ -0.56
VPS29-207ENST00000549970 DEFB130BP0DP73 79 aa11.56□□□□□ -0.56
VPS29-207ENST00000549970 DEFB130AP0DP74 79 aa11.56□□□□□ -0.56
VPS29-207ENST00000549970 TSPOP30536 169 aa11.56□□□□□ -0.56
VPS29-207ENST00000549970 S100A11P31949 105 aa11.56□□□□□ -0.56
VPS29-207ENST00000549970 CDKN1BP46527 198 aa11.56□□□□□ -0.56
VPS29-207ENST00000549970 ASAH1Q13510 395 aa11.56□□□□□ -0.56
VPS29-207ENST00000549970 VWC2Q2TAL6 325 aa11.56□□□□□ -0.56
VPS29-207ENST00000549970 LINC00299Q6ZSB3 139 aa11.56□□□□□ -0.56
VPS29-207ENST00000549970 TMEM256Q8N2U0 113 aa11.56□□□□□ -0.56
VPS29-207ENST00000549970 OR1L4Q8NGR5 311 aa11.56□□□□□ -0.56
VPS29-207ENST00000549970 PLAC8L1A1L4L8 177 aa11.55□□□□□ -0.56
VPS29-207ENST00000549970 PRAC2D3DTV9 90 aa11.55□□□□□ -0.56
VPS29-207ENST00000549970 H3BQ15 152 aa11.55□□□□□ -0.56
VPS29-207ENST00000549970 FGF7P21781 194 aa11.55□□□□□ -0.56
VPS29-207ENST00000549970 TAS2R60P59551 318 aa11.55□□□□□ -0.56
VPS29-207ENST00000549970 HBG1P69891 147 aa11.55□□□□□ -0.56
VPS29-207ENST00000549970 HBG2P69892 147 aa11.55□□□□□ -0.56
VPS29-207ENST00000549970 FCN2Q15485 313 aa11.55□□□□□ -0.56
VPS29-207ENST00000549970 ENKURQ8TC29 256 aa11.55□□□□□ -0.56
VPS29-207ENST00000549970 PFDN5Q99471 154 aa11.55□□□□□ -0.56
VPS29-207ENST00000549970 PARD6GQ9BYG4 376 aaPredicted RBP11.55□□□□□ -0.56
VPS29-207ENST00000549970 GPN1Q9HCN4 374 aaPredicted RBP11.55□□□□□ -0.56
VPS29-207ENST00000549970 SLC39A9Q9NUM3 307 aa11.55□□□□□ -0.56
VPS29-207ENST00000549970 PXMP4Q9Y6I8 212 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms