RNA–Protein interactions for RNA: ENST00000549328.1

CHMP1A-207, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 1,003 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-207ENST00000549328 LOC102723971A0A1B0GUV8 181 aa13.32□□□□□ -0.28
CHMP1A-207ENST00000549328 CST7O76096 145 aa13.32□□□□□ -0.28
CHMP1A-207ENST00000549328 CAMLGP49069 296 aa13.32□□□□□ -0.28
CHMP1A-207ENST00000549328 B2MP61769 119 aa13.32□□□□□ -0.28
CHMP1A-207ENST00000549328 OXA1LQ15070 435 aa13.32□□□□□ -0.28
CHMP1A-207ENST00000549328 BPIFA4PQ86YQ2 179 aa13.32□□□□□ -0.28
CHMP1A-207ENST00000549328 OR8A1Q8NGG7 326 aa13.32□□□□□ -0.28
CHMP1A-207ENST00000549328 TMEM37Q8WXS4 190 aa13.32□□□□□ -0.28
CHMP1A-207ENST00000549328 TMEM208Q9BTX3 173 aa13.32□□□□□ -0.28
CHMP1A-207ENST00000549328 UQCC1Q9NVA1 299 aa13.32□□□□□ -0.28
CHMP1A-207ENST00000549328 FAM24AA6NFZ4 105 aa13.31□□□□□ -0.28
CHMP1A-207ENST00000549328 CRXO43186 299 aaPredicted RBP13.31□□□□□ -0.28
CHMP1A-207ENST00000549328 COX7A2P2O60397 106 aa13.31□□□□□ -0.28
CHMP1A-207ENST00000549328 S100A11P31949 105 aa13.31□□□□□ -0.28
CHMP1A-207ENST00000549328 SPINK13Q1W4C9 94 aa13.31□□□□□ -0.28
CHMP1A-207ENST00000549328 VWC2Q2TAL6 325 aa13.31□□□□□ -0.28
CHMP1A-207ENST00000549328 FAM222AQ5U5X8 452 aa13.31□□□□□ -0.28
CHMP1A-207ENST00000549328 LCN15Q6UWW0 184 aa13.31□□□□□ -0.28
CHMP1A-207ENST00000549328 Q6ZRG5 221 aa13.31□□□□□ -0.28
CHMP1A-207ENST00000549328 FAM210BQ96KR6 192 aa13.31□□□□□ -0.28
CHMP1A-207ENST00000549328 NIPSNAP3BQ9BS92 247 aa13.31□□□□□ -0.28
CHMP1A-207ENST00000549328 NDUFAF3Q9BU61 184 aa13.31□□□□□ -0.28
CHMP1A-207ENST00000549328 DNAJC4Q9NNZ3 241 aa13.31□□□□□ -0.28
CHMP1A-207ENST00000549328 LYRM2Q9NU23 88 aaPredicted RBP13.31□□□□□ -0.28
CHMP1A-207ENST00000549328 WDR83OSQ9Y284 106 aa13.31□□□□□ -0.28
CHMP1A-207ENST00000549328 M0R2Z0 102 aa13.3□□□□□ -0.28
CHMP1A-207ENST00000549328 INSP01308 110 aa13.3□□□□□ -0.28
CHMP1A-207ENST00000549328 SULT1A1P50225 295 aa13.3□□□□□ -0.28
CHMP1A-207ENST00000549328 RAB32Q13637 225 aa13.3□□□□□ -0.28
CHMP1A-207ENST00000549328 C10orf113Q5VZT2 155 aa13.3□□□□□ -0.28
CHMP1A-207ENST00000549328 NRARPQ7Z6K4 114 aa13.3□□□□□ -0.28
CHMP1A-207ENST00000549328 SLC50A1Q9BRV3 221 aa13.3□□□□□ -0.28
CHMP1A-207ENST00000549328 ZNF331Q9NQX6 463 aaPredicted RBP13.3□□□□□ -0.28
CHMP1A-207ENST00000549328 YTHDF2Q9Y5A9 579 aaKnown RBP13.3□□□□□ -0.28
CHMP1A-207ENST00000549328 BIRC6Q9NR09 4857 aa13.29□□□□□ -0.28
CHMP1A-207ENST00000549328 A6NHS1 94 aa13.29□□□□□ -0.28
CHMP1A-207ENST00000549328 BOLA2-SMG1P6H3BVE0 249 aa13.29□□□□□ -0.28
CHMP1A-207ENST00000549328 S100A10P60903 97 aa13.29□□□□□ -0.28
CHMP1A-207ENST00000549328 HBG1P69891 147 aa13.29□□□□□ -0.28
CHMP1A-207ENST00000549328 HBG2P69892 147 aa13.29□□□□□ -0.28
CHMP1A-207ENST00000549328 HIST1H1AQ02539 215 aaPredicted RBP13.29□□□□□ -0.28
CHMP1A-207ENST00000549328 STX12Q86Y82 276 aa13.29□□□□□ -0.28
CHMP1A-207ENST00000549328 TMEM252Q8N6L7 170 aa13.29□□□□□ -0.28
CHMP1A-207ENST00000549328 CHAC2Q8WUX2 184 aa13.29□□□□□ -0.28
CHMP1A-207ENST00000549328 RPUSD4Q96CM3 377 aaKnown RBP13.29□□□□□ -0.28
CHMP1A-207ENST00000549328 GPN1Q9HCN4 374 aaPredicted RBP13.29□□□□□ -0.28
CHMP1A-207ENST00000549328 UPK1BO75841 260 aa13.28□□□□□ -0.28
CHMP1A-207ENST00000549328 P0DMU3 169 aa13.28□□□□□ -0.28
CHMP1A-207ENST00000549328 FAM231AP0DMU4 169 aa13.28□□□□□ -0.28
CHMP1A-207ENST00000549328 FAM231CP0DMU5 169 aa13.28□□□□□ -0.28
CHMP1A-207ENST00000549328 TSPOP30536 169 aa13.28□□□□□ -0.28
CHMP1A-207ENST00000549328 RPL29P47914 159 aaKnown RBP13.28□□□□□ -0.28
CHMP1A-207ENST00000549328 RHOBP62745 196 aa13.28□□□□□ -0.28
CHMP1A-207ENST00000549328 OPCMLQ14982 345 aa13.28□□□□□ -0.28
CHMP1A-207ENST00000549328 ATP6V1FQ16864 119 aa13.28□□□□□ -0.28
CHMP1A-207ENST00000549328 OR1L4Q8NGR5 311 aa13.28□□□□□ -0.28
CHMP1A-207ENST00000549328 ENKURQ8TC29 256 aa13.28□□□□□ -0.28
CHMP1A-207ENST00000549328 IGSF23A1L1A6 192 aa13.27□□□□□ -0.29
CHMP1A-207ENST00000549328 MORN5Q5VZ52 161 aa13.27□□□□□ -0.29
CHMP1A-207ENST00000549328 MIC13Q5XKP0 118 aa13.27□□□□□ -0.29
CHMP1A-207ENST00000549328 TMEM256Q8N2U0 113 aa13.27□□□□□ -0.29
CHMP1A-207ENST00000549328 PFDN5Q99471 154 aa13.27□□□□□ -0.29
CHMP1A-207ENST00000549328 PPP1R14DQ9NXH3 145 aa13.27□□□□□ -0.29
CHMP1A-207ENST00000549328 PXMP4Q9Y6I8 212 aa13.27□□□□□ -0.29
CHMP1A-207ENST00000549328 VPS13DQ5THJ4 4388 aa13.26□□□□□ -0.29
CHMP1A-207ENST00000549328 IGLC2P0DOY2 106 aa13.26□□□□□ -0.29
CHMP1A-207ENST00000549328 GUK1Q16774 197 aa13.26□□□□□ -0.29
CHMP1A-207ENST00000549328 BAP18Q8IXM2 172 aa13.26□□□□□ -0.29
CHMP1A-207ENST00000549328 SAT2Q96F10 170 aaPredicted RBP13.26□□□□□ -0.29
CHMP1A-207ENST00000549328 PTTG2Q9NZH5 202 aa13.26□□□□□ -0.29
CHMP1A-207ENST00000549328 PLA2G2EQ9NZK7 142 aa13.26□□□□□ -0.29
CHMP1A-207ENST00000549328 TRAV12-2A0A075B6T6 113 aa13.25□□□□□ -0.29
CHMP1A-207ENST00000549328 LYRM9A8MSI8 78 aa13.25□□□□□ -0.29
CHMP1A-207ENST00000549328 ZNF705GA8MUZ8 300 aaPredicted RBP13.25□□□□□ -0.29
CHMP1A-207ENST00000549328 MPDU1O75352 247 aa13.25□□□□□ -0.29
CHMP1A-207ENST00000549328 DAD1P61803 113 aa13.25□□□□□ -0.29
CHMP1A-207ENST00000549328 BAXQ07812 192 aa13.25□□□□□ -0.29
CHMP1A-207ENST00000549328 POM121L12Q8N7R1 296 aa13.25□□□□□ -0.29
CHMP1A-207ENST00000549328 SLC39A9Q9NUM3 307 aa13.25□□□□□ -0.29
CHMP1A-207ENST00000549328 UBE2L5PA0A1B0GUS4 154 aa13.24□□□□□ -0.29
CHMP1A-207ENST00000549328 H3BQ15 152 aa13.24□□□□□ -0.29
CHMP1A-207ENST00000549328 PRAF2O60831 178 aa13.24□□□□□ -0.29
CHMP1A-207ENST00000549328 RLN2P04090 185 aa13.24□□□□□ -0.29
CHMP1A-207ENST00000549328 CDKN1BP46527 198 aa13.24□□□□□ -0.29
CHMP1A-207ENST00000549328 SLC17A3O00476 420 aa13.23□□□□□ -0.29
CHMP1A-207ENST00000549328 SNRPCP09234 159 aaKnown RBP13.23□□□□□ -0.29
CHMP1A-207ENST00000549328 TAS2R60P59551 318 aa13.23□□□□□ -0.29
CHMP1A-207ENST00000549328 CYCSP99999 105 aaKnown RBP13.23□□□□□ -0.29
CHMP1A-207ENST00000549328 IFITM3Q01628 133 aa13.23□□□□□ -0.29
CHMP1A-207ENST00000549328 OR10J6PQ8NGY7 276 aa13.23□□□□□ -0.29
CHMP1A-207ENST00000549328 LINC01587Q99440 93 aa13.23□□□□□ -0.29
CHMP1A-207ENST00000549328 NMES1Q9C002 83 aa13.23□□□□□ -0.29
CHMP1A-207ENST00000549328 TRAV5A0A0B4J249 113 aa13.22□□□□□ -0.29
CHMP1A-207ENST00000549328 E5RGE8 158 aa13.22□□□□□ -0.29
CHMP1A-207ENST00000549328 ZNF253O75346 499 aa13.22□□□□□ -0.29
CHMP1A-207ENST00000549328 PRM2P04554 102 aa13.22□□□□□ -0.29
CHMP1A-207ENST00000549328 FGF7P21781 194 aa13.22□□□□□ -0.29
CHMP1A-207ENST00000549328 C20orf144Q9BQM9 153 aa13.22□□□□□ -0.29
CHMP1A-207ENST00000549328 SLC25A31Q9H0C2 315 aa13.22□□□□□ -0.29
CHMP1A-207ENST00000549328 FRAS1Q86XX4 4008 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 497 ms