RNA–Protein interactions for RNA: ENST00000549131.1

LINC00661-203, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best)

Gene LINC00661, Length 512 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-203ENST00000549131 HIST1H1AQ02539 215 aaPredicted RBP10.55□□□□□ -0.72
LINC00661-203ENST00000549131 SPINK13Q1W4C9 94 aa10.55□□□□□ -0.72
LINC00661-203ENST00000549131 C12orf74Q32Q52 190 aa10.55□□□□□ -0.72
LINC00661-203ENST00000549131 MIC13Q5XKP0 118 aa10.55□□□□□ -0.72
LINC00661-203ENST00000549131 LCN15Q6UWW0 184 aa10.55□□□□□ -0.72
LINC00661-203ENST00000549131 AMTNQ6UX39 209 aa10.55□□□□□ -0.72
LINC00661-203ENST00000549131 NRARPQ7Z6K4 114 aa10.55□□□□□ -0.72
LINC00661-203ENST00000549131 OR11H7Q8NGC8 314 aa10.55□□□□□ -0.72
LINC00661-203ENST00000549131 KMT2AQ03164 3969 aa10.54□□□□□ -0.72
LINC00661-203ENST00000549131 IGHV4-4A0A075B6R2 117 aa10.54□□□□□ -0.72
LINC00661-203ENST00000549131 DEFB131BA0A096LNP1 70 aa10.54□□□□□ -0.72
LINC00661-203ENST00000549131 MRPS12O15235 138 aaKnown RBP10.54□□□□□ -0.72
LINC00661-203ENST00000549131 SNRPCP09234 159 aaKnown RBP10.54□□□□□ -0.72
LINC00661-203ENST00000549131 PRB4P10163 310 aaPredicted RBP10.54□□□□□ -0.72
LINC00661-203ENST00000549131 CXCL2P19875 107 aa10.54□□□□□ -0.72
LINC00661-203ENST00000549131 Q6ZRG5 221 aa10.54□□□□□ -0.72
LINC00661-203ENST00000549131 BPIFA4PQ86YQ2 179 aa10.54□□□□□ -0.72
LINC00661-203ENST00000549131 C1orf158Q8N1D5 194 aa10.54□□□□□ -0.72
LINC00661-203ENST00000549131 IGF2BP2-AS1Q96M15 143 aa10.54□□□□□ -0.72
LINC00661-203ENST00000549131 BIRC6Q9NR09 4857 aa10.54□□□□□ -0.72
LINC00661-203ENST00000549131 APLNQ9ULZ1 77 aa10.54□□□□□ -0.72
LINC00661-203ENST00000549131 WDR83OSQ9Y284 106 aa10.54□□□□□ -0.72
LINC00661-203ENST00000549131 LOC102723971A0A1B0GUV8 181 aa10.53□□□□□ -0.72
LINC00661-203ENST00000549131 BOLA2-SMG1P6H3BVE0 249 aa10.53□□□□□ -0.72
LINC00661-203ENST00000549131 SIX6O95475 246 aa10.53□□□□□ -0.72
LINC00661-203ENST00000549131 AMBPP02760 352 aa10.53□□□□□ -0.72
LINC00661-203ENST00000549131 SPART-AS1P0CW21 52 aa10.53□□□□□ -0.72
LINC00661-203ENST00000549131 S100A11P31949 105 aa10.53□□□□□ -0.72
LINC00661-203ENST00000549131 RHOBP62745 196 aa10.53□□□□□ -0.72
LINC00661-203ENST00000549131 IFITM3Q01628 133 aa10.53□□□□□ -0.72
LINC00661-203ENST00000549131 IL15RAQ13261 267 aa10.53□□□□□ -0.72
LINC00661-203ENST00000549131 OPCMLQ14982 345 aa10.53□□□□□ -0.72
LINC00661-203ENST00000549131 PSG3Q16557 428 aa10.53□□□□□ -0.72
LINC00661-203ENST00000549131 RRN3P1Q2M238 152 aa10.53□□□□□ -0.72
LINC00661-203ENST00000549131 VWC2Q2TAL6 325 aa10.53□□□□□ -0.72
LINC00661-203ENST00000549131 LRRC37A5PQ49AS3 106 aa10.53□□□□□ -0.72
LINC00661-203ENST00000549131 MORN5Q5VZ52 161 aa10.53□□□□□ -0.72
LINC00661-203ENST00000549131 BAP18Q8IXM2 172 aa10.53□□□□□ -0.72
LINC00661-203ENST00000549131 TMEM252Q8N6L7 170 aa10.53□□□□□ -0.72
LINC00661-203ENST00000549131 TMEM37Q8WXS4 190 aa10.53□□□□□ -0.72
LINC00661-203ENST00000549131 SLC50A1Q9BRV3 221 aa10.53□□□□□ -0.72
LINC00661-203ENST00000549131 PPP1R14DQ9NXH3 145 aa10.53□□□□□ -0.72
LINC00661-203ENST00000549131 TEX48A0A1B0GUV7 120 aa10.52□□□□□ -0.73
LINC00661-203ENST00000549131 H3BTX0 84 aa10.52□□□□□ -0.73
LINC00661-203ENST00000549131 PRAF2O60831 178 aa10.52□□□□□ -0.73
LINC00661-203ENST00000549131 FGF7P21781 194 aa10.52□□□□□ -0.73
LINC00661-203ENST00000549131 PRR20EP86478 221 aa10.52□□□□□ -0.73
LINC00661-203ENST00000549131 PRR20CP86479 221 aa10.52□□□□□ -0.73
LINC00661-203ENST00000549131 PRR20DP86480 221 aa10.52□□□□□ -0.73
LINC00661-203ENST00000549131 PRR20BP86481 221 aa10.52□□□□□ -0.73
LINC00661-203ENST00000549131 PRR20AP86496 221 aa10.52□□□□□ -0.73
LINC00661-203ENST00000549131 FAM222AQ5U5X8 452 aa10.52□□□□□ -0.73
LINC00661-203ENST00000549131 OR8A1Q8NGG7 326 aa10.52□□□□□ -0.73
LINC00661-203ENST00000549131 OR1L4Q8NGR5 311 aa10.52□□□□□ -0.73
LINC00661-203ENST00000549131 RPUSD4Q96CM3 377 aaKnown RBP10.52□□□□□ -0.73
LINC00661-203ENST00000549131 PFDN5Q99471 154 aa10.52□□□□□ -0.73
LINC00661-203ENST00000549131 RNF126Q9BV68 326 aa10.52□□□□□ -0.73
LINC00661-203ENST00000549131 YTHDF2Q9Y5A9 579 aaKnown RBP10.52□□□□□ -0.73
LINC00661-203ENST00000549131 VPS13DQ5THJ4 4388 aa10.51□□□□□ -0.73
LINC00661-203ENST00000549131 TRAV12-2A0A075B6T6 113 aa10.51□□□□□ -0.73
LINC00661-203ENST00000549131 INMT-MINDY4F8WBC2 141 aa10.51□□□□□ -0.73
LINC00661-203ENST00000549131 SLC17A3O00476 420 aa10.51□□□□□ -0.73
LINC00661-203ENST00000549131 B2MP61769 119 aa10.51□□□□□ -0.73
LINC00661-203ENST00000549131 DNAJC4Q9NNZ3 241 aa10.51□□□□□ -0.73
LINC00661-203ENST00000549131 ZNF331Q9NQX6 463 aaPredicted RBP10.51□□□□□ -0.73
LINC00661-203ENST00000549131 SLC39A9Q9NUM3 307 aa10.51□□□□□ -0.73
LINC00661-203ENST00000549131 DKK2Q9UBU2 259 aa10.51□□□□□ -0.73
LINC00661-203ENST00000549131 CRXO43186 299 aaPredicted RBP10.5□□□□□ -0.73
LINC00661-203ENST00000549131 RLN2P04090 185 aa10.5□□□□□ -0.73
LINC00661-203ENST00000549131 RPL29P47914 159 aaKnown RBP10.5□□□□□ -0.73
LINC00661-203ENST00000549131 DEFA1P59665 94 aa10.5□□□□□ -0.73
LINC00661-203ENST00000549131 DEFA3P59666 94 aa10.5□□□□□ -0.73
LINC00661-203ENST00000549131 ATP6V1FQ16864 119 aa10.5□□□□□ -0.73
LINC00661-203ENST00000549131 NIPSNAP3BQ9BS92 247 aa10.5□□□□□ -0.73
LINC00661-203ENST00000549131 NMES1Q9C002 83 aa10.5□□□□□ -0.73
LINC00661-203ENST00000549131 PXMP4Q9Y6I8 212 aa10.5□□□□□ -0.73
LINC00661-203ENST00000549131 TRAV5A0A0B4J249 113 aa10.49□□□□□ -0.73
LINC00661-203ENST00000549131 E5RGE8 158 aa10.49□□□□□ -0.73
LINC00661-203ENST00000549131 IGLC2P0DOY2 106 aa10.49□□□□□ -0.73
LINC00661-203ENST00000549131 HTN3P15516 51 aa10.49□□□□□ -0.73
LINC00661-203ENST00000549131 OR5C1Q8NGR4 320 aa10.49□□□□□ -0.73
LINC00661-203ENST00000549131 THAP6Q8TBB0 222 aa10.49□□□□□ -0.73
LINC00661-203ENST00000549131 NDUFAF3Q9BU61 184 aa10.49□□□□□ -0.73
LINC00661-203ENST00000549131 NPCDR1Q9BY65 106 aa10.49□□□□□ -0.73
LINC00661-203ENST00000549131 OR5AC2Q9NZP5 309 aa10.49□□□□□ -0.73
LINC00661-203ENST00000549131 FRAS1Q86XX4 4008 aa10.49□□□□□ -0.73
LINC00661-203ENST00000549131 DNAH6Q9C0G6 4158 aa10.48□□□□□ -0.73
LINC00661-203ENST00000549131 ZNF705GA8MUZ8 300 aaPredicted RBP10.48□□□□□ -0.73
LINC00661-203ENST00000549131 H3BQ15 152 aa10.48□□□□□ -0.73
LINC00661-203ENST00000549131 SSNA1O43805 119 aa10.48□□□□□ -0.73
LINC00661-203ENST00000549131 MPDU1O75352 247 aa10.48□□□□□ -0.73
LINC00661-203ENST00000549131 NHLH2Q02577 135 aa10.48□□□□□ -0.73
LINC00661-203ENST00000549131 CLINT1Q14677 625 aa10.48□□□□□ -0.73
LINC00661-203ENST00000549131 SLC25A31Q9H0C2 315 aa10.48□□□□□ -0.73
LINC00661-203ENST00000549131 PRM2P04554 102 aa10.47□□□□□ -0.73
LINC00661-203ENST00000549131 CDKN1BP46527 198 aa10.47□□□□□ -0.73
LINC00661-203ENST00000549131 DAD1P61803 113 aa10.47□□□□□ -0.73
LINC00661-203ENST00000549131 CYCSP99999 105 aaKnown RBP10.47□□□□□ -0.73
LINC00661-203ENST00000549131 GUK1Q16774 197 aa10.47□□□□□ -0.73
LINC00661-203ENST00000549131 OR10J6PQ8NGY7 276 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 106.4 ms