RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 ZNF331Q9NQX6 463 aaPredicted RBP13.99□□□□□ -0.17
DDX55-211ENST00000544429 TIMM9Q9Y5J7 89 aa13.99□□□□□ -0.17
DDX55-211ENST00000544429 RFNGQ9Y644 331 aa13.99□□□□□ -0.17
DDX55-211ENST00000544429 A0A0J9YX75 114 aa13.98□□□□□ -0.17
DDX55-211ENST00000544429 C4BPBP20851 252 aa13.98□□□□□ -0.17
DDX55-211ENST00000544429 IGFL4Q6B9Z1 124 aa13.98□□□□□ -0.17
DDX55-211ENST00000544429 MRPL32Q9BYC8 188 aaKnown RBP13.98□□□□□ -0.17
DDX55-211ENST00000544429 RPRMQ9NS64 109 aa13.98□□□□□ -0.17
DDX55-211ENST00000544429 DNAH7Q8WXX0 4024 aa13.98□□□□□ -0.17
DDX55-211ENST00000544429 SPRY2O43597 315 aa13.97□□□□□ -0.17
DDX55-211ENST00000544429 GUK1Q16774 197 aa13.97□□□□□ -0.17
DDX55-211ENST00000544429 TMEM41BQ5BJD5 291 aa13.97□□□□□ -0.17
DDX55-211ENST00000544429 MIR17HGQ75NE6 70 aa13.97□□□□□ -0.17
DDX55-211ENST00000544429 RNF182Q8N6D2 247 aa13.97□□□□□ -0.17
DDX55-211ENST00000544429 SLC50A1Q9BRV3 221 aa13.97□□□□□ -0.17
DDX55-211ENST00000544429 SLC25A2Q9BXI2 301 aa13.97□□□□□ -0.17
DDX55-211ENST00000544429 ZNF586Q9NXT0 402 aa13.97□□□□□ -0.17
DDX55-211ENST00000544429 F6UB75 175 aa13.96□□□□□ -0.17
DDX55-211ENST00000544429 SMLR1H3BR10 107 aa13.96□□□□□ -0.17
DDX55-211ENST00000544429 SLC17A3O00476 420 aa13.96□□□□□ -0.17
DDX55-211ENST00000544429 ZNF253O75346 499 aa13.96□□□□□ -0.17
DDX55-211ENST00000544429 CA1P00915 261 aaPredicted RBP13.96□□□□□ -0.17
DDX55-211ENST00000544429 FFAR4Q5NUL3 377 aa13.96□□□□□ -0.17
DDX55-211ENST00000544429 CSNK1G2-AS1Q8NCQ2 148 aa13.96□□□□□ -0.17
DDX55-211ENST00000544429 OR2G3Q8NGZ4 309 aa13.96□□□□□ -0.17
DDX55-211ENST00000544429 FUT9Q9Y231 359 aa13.96□□□□□ -0.17
DDX55-211ENST00000544429 HLA-DMBP28068 263 aa13.95□□□□□ -0.18
DDX55-211ENST00000544429 PSG3Q16557 428 aa13.95□□□□□ -0.18
DDX55-211ENST00000544429 OR11H4Q8NGC9 324 aa13.95□□□□□ -0.18
DDX55-211ENST00000544429 PSMG3Q9BT73 122 aaPredicted RBP13.95□□□□□ -0.18
DDX55-211ENST00000544429 TRBV19A0A075B6N1 114 aa13.94□□□□□ -0.18
DDX55-211ENST00000544429 HMSDA8MTL9 139 aa13.94□□□□□ -0.18
DDX55-211ENST00000544429 NDUFB4O95168 129 aa13.94□□□□□ -0.18
DDX55-211ENST00000544429 SNRPCP09234 159 aaKnown RBP13.94□□□□□ -0.18
DDX55-211ENST00000544429 HIST1H1EP10412 219 aaKnown RBP13.94□□□□□ -0.18
DDX55-211ENST00000544429 PDE6HQ13956 83 aa13.94□□□□□ -0.18
DDX55-211ENST00000544429 AMTNQ6UX39 209 aa13.94□□□□□ -0.18
DDX55-211ENST00000544429 ZNF503Q96F45 646 aa13.94□□□□□ -0.18
DDX55-211ENST00000544429 ST6GAL2Q96JF0 529 aa13.94□□□□□ -0.18
DDX55-211ENST00000544429 ARPC5O15511 151 aa13.93□□□□□ -0.18
DDX55-211ENST00000544429 PYYP10082 97 aa13.93□□□□□ -0.18
DDX55-211ENST00000544429 M6PRP20645 277 aa13.93□□□□□ -0.18
DDX55-211ENST00000544429 ATP6V0CP27449 155 aa13.93□□□□□ -0.18
DDX55-211ENST00000544429 ZNF345Q14585 488 aa13.93□□□□□ -0.18
DDX55-211ENST00000544429 RPL7L1Q6DKI1 246 aaKnown RBP13.93□□□□□ -0.18
DDX55-211ENST00000544429 EBLN2Q6P2I7 272 aa13.93□□□□□ -0.18
DDX55-211ENST00000544429 CLEC5AQ9NY25 188 aa13.93□□□□□ -0.18
DDX55-211ENST00000544429 H3BTX0 84 aa13.92□□□□□ -0.18
DDX55-211ENST00000544429 NUTF2P61970 127 aaKnown RBP13.92□□□□□ -0.18
DDX55-211ENST00000544429 RHOBP62745 196 aa13.92□□□□□ -0.18
DDX55-211ENST00000544429 HSD17B11Q8NBQ5 300 aa13.92□□□□□ -0.18
DDX55-211ENST00000544429 LRRC20Q8TCA0 184 aa13.92□□□□□ -0.18
DDX55-211ENST00000544429 FXYD5Q96DB9 178 aa13.92□□□□□ -0.18
DDX55-211ENST00000544429 MFFQ9GZY8 342 aa13.92□□□□□ -0.18
DDX55-211ENST00000544429 CYTL1Q9NRR1 136 aa13.92□□□□□ -0.18
DDX55-211ENST00000544429 TAAR5O14804 337 aa13.91□□□□□ -0.18
DDX55-211ENST00000544429 CNN1P51911 297 aaKnown RBP13.91□□□□□ -0.18
DDX55-211ENST00000544429 SERF2P84101 59 aa13.91□□□□□ -0.18
DDX55-211ENST00000544429 ACOT6Q3I5F7 207 aaPredicted RBP13.91□□□□□ -0.18
DDX55-211ENST00000544429 KCNRGQ8N5I3 272 aa13.91□□□□□ -0.18
DDX55-211ENST00000544429 ZNF738Q8NE65 137 aa13.91□□□□□ -0.18
DDX55-211ENST00000544429 OR51M1Q9H341 326 aa13.91□□□□□ -0.18
DDX55-211ENST00000544429 ZNF705EA8MWA4 302 aaPredicted RBP13.9□□□□□ -0.18
DDX55-211ENST00000544429 RAB2AP61019 212 aa13.9□□□□□ -0.18
DDX55-211ENST00000544429 OR4B1Q8NGF8 309 aa13.9□□□□□ -0.18
DDX55-211ENST00000544429 OR8A1Q8NGG7 326 aa13.9□□□□□ -0.18
DDX55-211ENST00000544429 RPUSD4Q96CM3 377 aaKnown RBP13.9□□□□□ -0.18
DDX55-211ENST00000544429 MRPL53Q96EL3 112 aaKnown RBP13.9□□□□□ -0.18
DDX55-211ENST00000544429 C1QTNF4Q9BXJ3 329 aa13.9□□□□□ -0.18
DDX55-211ENST00000544429 SLC35B3Q9H1N7 401 aa13.9□□□□□ -0.18
DDX55-211ENST00000544429 SH3BGRL3Q9H299 93 aa13.9□□□□□ -0.18
DDX55-211ENST00000544429 BORCS7-ASMTA0A0B4J1R7 106 aa13.89□□□□□ -0.19
DDX55-211ENST00000544429 JTBO76095 146 aa13.89□□□□□ -0.19
DDX55-211ENST00000544429 DUSP14O95147 198 aaKnown RBP13.89□□□□□ -0.19
DDX55-211ENST00000544429 IGKV3-20P01619 116 aa13.89□□□□□ -0.19
DDX55-211ENST00000544429 NBEAP1P0C6P0 100 aa13.89□□□□□ -0.19
DDX55-211ENST00000544429 PSG9Q00887 426 aa13.89□□□□□ -0.19
DDX55-211ENST00000544429 TCTE3Q8IZS6 198 aa13.89□□□□□ -0.19
DDX55-211ENST00000544429 RPP25LQ8N5L8 163 aaKnown RBP13.89□□□□□ -0.19
DDX55-211ENST00000544429 OR11H2Q8NH07 326 aa13.89□□□□□ -0.19
DDX55-211ENST00000544429 RNF141Q8WVD5 230 aa13.89□□□□□ -0.19
DDX55-211ENST00000544429 GNPNAT1Q96EK6 184 aaPredicted RBP13.89□□□□□ -0.19
DDX55-211ENST00000544429 RARRES2Q99969 163 aa13.89□□□□□ -0.19
DDX55-211ENST00000544429 PAXXQ9BUH6 204 aa13.89□□□□□ -0.19
DDX55-211ENST00000544429 ZNF705FA8MVS1 300 aaPredicted RBP13.88□□□□□ -0.19
DDX55-211ENST00000544429 PRAC2D3DTV9 90 aa13.88□□□□□ -0.19
DDX55-211ENST00000544429 ZNF705DP0CH99 300 aaPredicted RBP13.88□□□□□ -0.19
DDX55-211ENST00000544429 ZNF705BP0CI00 300 aaPredicted RBP13.88□□□□□ -0.19
DDX55-211ENST00000544429 KHDC3LQ587J8 217 aa13.88□□□□□ -0.19
DDX55-211ENST00000544429 OR10G4Q8NGN3 311 aa13.88□□□□□ -0.19
DDX55-211ENST00000544429 OR10G9Q8NGN4 311 aa13.88□□□□□ -0.19
DDX55-211ENST00000544429 OR10G7Q8NGN6 311 aa13.88□□□□□ -0.19
DDX55-211ENST00000544429 XCL2Q9UBD3 114 aa13.88□□□□□ -0.19
DDX55-211ENST00000544429 X6R8D5 127 aa13.88□□□□□ -0.19
DDX55-211ENST00000544429 TAS2R45P59539 299 aa13.87□□□□□ -0.19
DDX55-211ENST00000544429 ZNF705AQ6ZN79 300 aaPredicted RBP13.87□□□□□ -0.19
DDX55-211ENST00000544429 MUC7Q8TAX7 377 aa13.87□□□□□ -0.19
DDX55-211ENST00000544429 CSMD3Q7Z407 3707 aa13.87□□□□□ -0.19
DDX55-211ENST00000544429 A0A0J9YWU9 116 aa13.86□□□□□ -0.19
DDX55-211ENST00000544429 OR7C2O60412 319 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms