RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 RPL12P30050 165 aaKnown RBP7.06□□□□□ -1.28
YBX3-212ENST00000542002 B2MP61769 119 aa7.06□□□□□ -1.28
YBX3-212ENST00000542002 FAM78BQ5VT40 261 aa7.06□□□□□ -1.28
YBX3-212ENST00000542002 MORN3Q6PF18 240 aaPredicted RBP7.06□□□□□ -1.28
YBX3-212ENST00000542002 FOXI2Q6ZQN5 318 aa7.06□□□□□ -1.28
YBX3-212ENST00000542002 Q6ZRG5 221 aa7.06□□□□□ -1.28
YBX3-212ENST00000542002 IL17DQ8TAD2 202 aa7.06□□□□□ -1.28
YBX3-212ENST00000542002 GATAD1Q8WUU5 269 aa7.06□□□□□ -1.28
YBX3-212ENST00000542002 WDR61Q9GZS3 305 aaKnown RBP7.06□□□□□ -1.28
YBX3-212ENST00000542002 SLC35B3Q9H1N7 401 aa7.06□□□□□ -1.28
YBX3-212ENST00000542002 MED28Q9H204 178 aa7.06□□□□□ -1.28
YBX3-212ENST00000542002 XCL2Q9UBD3 114 aa7.06□□□□□ -1.28
YBX3-212ENST00000542002 HSPB11Q9Y547 144 aa7.06□□□□□ -1.28
YBX3-212ENST00000542002 PXMP4Q9Y6I8 212 aa7.06□□□□□ -1.28
YBX3-212ENST00000542002 X6R8D5 127 aa7.06□□□□□ -1.28
YBX3-212ENST00000542002 ZNF705FA8MVS1 300 aaPredicted RBP7.05□□□□□ -1.28
YBX3-212ENST00000542002 ZNF705EA8MWA4 302 aaPredicted RBP7.05□□□□□ -1.28
YBX3-212ENST00000542002 SLC17A3O00476 420 aa7.05□□□□□ -1.28
YBX3-212ENST00000542002 RBMY1A1P0DJD3 496 aaKnown RBP7.05□□□□□ -1.28
YBX3-212ENST00000542002 RBMY1CP0DJD4 496 aa7.05□□□□□ -1.28
YBX3-212ENST00000542002 ATF4P18848 351 aaPredicted RBP7.05□□□□□ -1.28
YBX3-212ENST00000542002 MEOX2P50222 304 aa7.05□□□□□ -1.28
YBX3-212ENST00000542002 RBMY1FQ15415 496 aaKnown RBP7.05□□□□□ -1.28
YBX3-212ENST00000542002 RGS21Q2M5E4 152 aa7.05□□□□□ -1.28
YBX3-212ENST00000542002 SPATA31B1PQ5VZV4 182 aa7.05□□□□□ -1.28
YBX3-212ENST00000542002 AMTNQ6UX39 209 aa7.05□□□□□ -1.28
YBX3-212ENST00000542002 Q8NAQ8 132 aa7.05□□□□□ -1.28
YBX3-212ENST00000542002 OR4B1Q8NGF8 309 aa7.05□□□□□ -1.28
YBX3-212ENST00000542002 SAT2Q96F10 170 aaPredicted RBP7.05□□□□□ -1.28
YBX3-212ENST00000542002 CLUHP3Q96NS8 147 aa7.05□□□□□ -1.28
YBX3-212ENST00000542002 SMIM3Q9BZL3 60 aa7.05□□□□□ -1.28
YBX3-212ENST00000542002 RPRMQ9NS64 109 aa7.05□□□□□ -1.28
YBX3-212ENST00000542002 ZNF586Q9NXT0 402 aa7.05□□□□□ -1.28
YBX3-212ENST00000542002 A8MTW9 85 aa7.04□□□□□ -1.28
YBX3-212ENST00000542002 PRAC2D3DTV9 90 aa7.04□□□□□ -1.28
YBX3-212ENST00000542002 MPDU1O75352 247 aa7.04□□□□□ -1.28
YBX3-212ENST00000542002 S100A7P31151 101 aa7.04□□□□□ -1.28
YBX3-212ENST00000542002 PSG3Q16557 428 aa7.04□□□□□ -1.28
YBX3-212ENST00000542002 FAM167A-AS1Q96KT0 104 aa7.04□□□□□ -1.28
YBX3-212ENST00000542002 ATP5SQ99766 215 aa7.04□□□□□ -1.28
YBX3-212ENST00000542002 HRH4Q9H3N8 390 aa7.04□□□□□ -1.28
YBX3-212ENST00000542002 ZNF331Q9NQX6 463 aaPredicted RBP7.04□□□□□ -1.28
YBX3-212ENST00000542002 IGHV4-28A0A0C4DH34 117 aa7.03□□□□□ -1.28
YBX3-212ENST00000542002 G3V3Q6 166 aa7.03□□□□□ -1.28
YBX3-212ENST00000542002 NDUFB4O95168 129 aa7.03□□□□□ -1.28
YBX3-212ENST00000542002 PRM2P04554 102 aa7.03□□□□□ -1.28
YBX3-212ENST00000542002 PET100P0DJ07 73 aa7.03□□□□□ -1.28
YBX3-212ENST00000542002 CNN1P51911 297 aaKnown RBP7.03□□□□□ -1.28
YBX3-212ENST00000542002 PSG9Q00887 426 aa7.03□□□□□ -1.28
YBX3-212ENST00000542002 SAMD13Q5VXD3 122 aa7.03□□□□□ -1.28
YBX3-212ENST00000542002 EBLN2Q6P2I7 272 aa7.03□□□□□ -1.28
YBX3-212ENST00000542002 MIR17HGQ75NE6 70 aa7.03□□□□□ -1.28
YBX3-212ENST00000542002 BPIFA4PQ86YQ2 179 aa7.03□□□□□ -1.28
YBX3-212ENST00000542002 C1orf158Q8N1D5 194 aa7.03□□□□□ -1.28
YBX3-212ENST00000542002 OR1L4Q8NGR5 311 aa7.03□□□□□ -1.28
YBX3-212ENST00000542002 SLC25A2Q9BXI2 301 aa7.03□□□□□ -1.28
YBX3-212ENST00000542002 TENM2Q9NT68 2774 aa7.03□□□□□ -1.28
YBX3-212ENST00000542002 CRXO43186 299 aaPredicted RBP7.02□□□□□ -1.29
YBX3-212ENST00000542002 EIF3GO75821 320 aaKnown RBP eCLIP7.02□□□□□ -1.29
YBX3-212ENST00000542002 PYYP10082 97 aa7.02□□□□□ -1.29
YBX3-212ENST00000542002 NANOS2P60321 138 aaKnown RBP7.02□□□□□ -1.29
YBX3-212ENST00000542002 NUTF2P61970 127 aaKnown RBP7.02□□□□□ -1.29
YBX3-212ENST00000542002 TMEM41BQ5BJD5 291 aa7.02□□□□□ -1.29
YBX3-212ENST00000542002 ZNF705AQ6ZN79 300 aaPredicted RBP7.02□□□□□ -1.29
YBX3-212ENST00000542002 S100A7AQ86SG5 101 aa7.02□□□□□ -1.29
YBX3-212ENST00000542002 ZNF738Q8NE65 137 aa7.02□□□□□ -1.29
YBX3-212ENST00000542002 OR8A1Q8NGG7 326 aa7.02□□□□□ -1.29
YBX3-212ENST00000542002 LRRC20Q8TCA0 184 aa7.02□□□□□ -1.29
YBX3-212ENST00000542002 ZNF503Q96F45 646 aa7.02□□□□□ -1.29
YBX3-212ENST00000542002 PFDN5Q99471 154 aa7.02□□□□□ -1.29
YBX3-212ENST00000542002 TMEM14CQ9P0S9 112 aa7.02□□□□□ -1.29
YBX3-212ENST00000542002 TRBV19A0A075B6N1 114 aa7.01□□□□□ -1.29
YBX3-212ENST00000542002 J3QL48 77 aa7.01□□□□□ -1.29
YBX3-212ENST00000542002 GIPP09681 153 aaPredicted RBP7.01□□□□□ -1.29
YBX3-212ENST00000542002 PMS2P11Q13670 270 aa7.01□□□□□ -1.29
YBX3-212ENST00000542002 LCN15Q6UWW0 184 aa7.01□□□□□ -1.29
YBX3-212ENST00000542002 RPUSD4Q96CM3 377 aaKnown RBP7.01□□□□□ -1.29
YBX3-212ENST00000542002 AQP10Q96PS8 301 aa7.01□□□□□ -1.29
YBX3-212ENST00000542002 MFFQ9GZY8 342 aa7.01□□□□□ -1.29
YBX3-212ENST00000542002 C11orf68Q9H3H3 251 aaKnown RBP7.01□□□□□ -1.29
YBX3-212ENST00000542002 DNAH1Q9P2D7 4330 aa7□□□□□ -1.29
YBX3-212ENST00000542002 TRAV12-2A0A075B6T6 113 aa7□□□□□ -1.29
YBX3-212ENST00000542002 IGHV3OR16-12A0A075B7B8 117 aa7□□□□□ -1.29
YBX3-212ENST00000542002 SMLR1H3BR10 107 aa7□□□□□ -1.29
YBX3-212ENST00000542002 M0R2Z0 102 aa7□□□□□ -1.29
YBX3-212ENST00000542002 IFNA5P01569 189 aa7□□□□□ -1.29
YBX3-212ENST00000542002 MIFP14174 115 aa7□□□□□ -1.29
YBX3-212ENST00000542002 CXCL2P19875 107 aa7□□□□□ -1.29
YBX3-212ENST00000542002 HIST1H1AQ02539 215 aaPredicted RBP7□□□□□ -1.29
YBX3-212ENST00000542002 KIR3DS1Q14943 382 aa7□□□□□ -1.29
YBX3-212ENST00000542002 SPINK13Q1W4C9 94 aa7□□□□□ -1.29
YBX3-212ENST00000542002 FFAR4Q5NUL3 377 aa7□□□□□ -1.29
YBX3-212ENST00000542002 EXOC3-AS1Q8N2X6 119 aa7□□□□□ -1.29
YBX3-212ENST00000542002 C11orf45Q8TAV5 145 aa7□□□□□ -1.29
YBX3-212ENST00000542002 SCGB1C1Q8TD33 95 aa7□□□□□ -1.29
YBX3-212ENST00000542002 FXYD5Q96DB9 178 aa7□□□□□ -1.29
YBX3-212ENST00000542002 C1QTNF4Q9BXJ3 329 aa7□□□□□ -1.29
YBX3-212ENST00000542002 PARD6GQ9BYG4 376 aaPredicted RBP7□□□□□ -1.29
YBX3-212ENST00000542002 CELA1Q9UNI1 258 aa7□□□□□ -1.29
YBX3-212ENST00000542002 RNF24Q9Y225 148 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms