RNA–Protein interactions for RNA: ENST00000540230.5

UBE3B-212, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-212ENST00000540230 C10orf113Q5VZT2 155 aa10.9□□□□□ -0.66
UBE3B-212ENST00000540230 SLC39A9Q9NUM3 307 aa10.9□□□□□ -0.66
UBE3B-212ENST00000540230 PXMP4Q9Y6I8 212 aa10.9□□□□□ -0.66
UBE3B-212ENST00000540230 ELOA3CA0A087WX78 387 aaPredicted RBP10.89□□□□□ -0.67
UBE3B-212ENST00000540230 GCSAMLQ5JQS6 135 aa10.89□□□□□ -0.67
UBE3B-212ENST00000540230 EBLN2Q6P2I7 272 aa10.89□□□□□ -0.67
UBE3B-212ENST00000540230 Q6ZRG5 221 aa10.89□□□□□ -0.67
UBE3B-212ENST00000540230 CLUHP3Q96NS8 147 aa10.89□□□□□ -0.67
UBE3B-212ENST00000540230 NPCDR1Q9BY65 106 aa10.89□□□□□ -0.67
UBE3B-212ENST00000540230 SLC25A31Q9H0C2 315 aa10.89□□□□□ -0.67
UBE3B-212ENST00000540230 DNAJC4Q9NNZ3 241 aa10.89□□□□□ -0.67
UBE3B-212ENST00000540230 A8MTW9 85 aa10.89□□□□□ -0.67
UBE3B-212ENST00000540230 SLC17A3O00476 420 aa10.89□□□□□ -0.67
UBE3B-212ENST00000540230 AMTNQ6UX39 209 aa10.89□□□□□ -0.67
UBE3B-212ENST00000540230 S100A7AQ86SG5 101 aa10.89□□□□□ -0.67
UBE3B-212ENST00000540230 CHAC2Q8WUX2 184 aa10.89□□□□□ -0.67
UBE3B-212ENST00000540230 C1QTNF4Q9BXJ3 329 aa10.89□□□□□ -0.67
UBE3B-212ENST00000540230 H3BQ15 152 aa10.88□□□□□ -0.67
UBE3B-212ENST00000540230 IGLC2P0DOY2 106 aa10.88□□□□□ -0.67
UBE3B-212ENST00000540230 MIFP14174 115 aa10.88□□□□□ -0.67
UBE3B-212ENST00000540230 CNN1P51911 297 aaKnown RBP10.88□□□□□ -0.67
UBE3B-212ENST00000540230 PSG9Q00887 426 aa10.88□□□□□ -0.67
UBE3B-212ENST00000540230 SPATA31B1PQ5VZV4 182 aa10.88□□□□□ -0.67
UBE3B-212ENST00000540230 BPIFA4PQ86YQ2 179 aa10.88□□□□□ -0.67
UBE3B-212ENST00000540230 ZNF738Q8NE65 137 aa10.88□□□□□ -0.67
UBE3B-212ENST00000540230 C11orf45Q8TAV5 145 aa10.88□□□□□ -0.67
UBE3B-212ENST00000540230 MBD2Q9UBB5 411 aa10.88□□□□□ -0.67
UBE3B-212ENST00000540230 CEMP1Q6PRD7 247 aaPredicted RBP10.87□□□□□ -0.67
UBE3B-212ENST00000540230 ZNF705AQ6ZN79 300 aaPredicted RBP10.87□□□□□ -0.67
UBE3B-212ENST00000540230 OR11H7Q8NGC8 314 aa10.87□□□□□ -0.67
UBE3B-212ENST00000540230 OR1L4Q8NGR5 311 aa10.87□□□□□ -0.67
UBE3B-212ENST00000540230 PHLDA1Q8WV24 401 aaPredicted RBP10.87□□□□□ -0.67
UBE3B-212ENST00000540230 WDR61Q9GZS3 305 aaKnown RBP10.87□□□□□ -0.67
UBE3B-212ENST00000540230 MFFQ9GZY8 342 aa10.87□□□□□ -0.67
UBE3B-212ENST00000540230 ZNF331Q9NQX6 463 aaPredicted RBP10.87□□□□□ -0.67
UBE3B-212ENST00000540230 IGHV3OR16-12A0A075B7B8 117 aa10.86□□□□□ -0.67
UBE3B-212ENST00000540230 ZNF705FA8MVS1 300 aaPredicted RBP10.86□□□□□ -0.67
UBE3B-212ENST00000540230 MPDU1O75352 247 aa10.86□□□□□ -0.67
UBE3B-212ENST00000540230 FCN2Q15485 313 aa10.86□□□□□ -0.67
UBE3B-212ENST00000540230 PSG3Q16557 428 aa10.86□□□□□ -0.67
UBE3B-212ENST00000540230 LCN15Q6UWW0 184 aa10.86□□□□□ -0.67
UBE3B-212ENST00000540230 C1orf158Q8N1D5 194 aa10.86□□□□□ -0.67
UBE3B-212ENST00000540230 LRRC20Q8TCA0 184 aa10.86□□□□□ -0.67
UBE3B-212ENST00000540230 PFDN5Q99471 154 aa10.86□□□□□ -0.67
UBE3B-212ENST00000540230 CELA1Q9UNI1 258 aa10.86□□□□□ -0.67
UBE3B-212ENST00000540230 HSPB11Q9Y547 144 aa10.86□□□□□ -0.67
UBE3B-212ENST00000540230 NUPR2A6NF83 97 aa10.85□□□□□ -0.67
UBE3B-212ENST00000540230 M0R2Z0 102 aa10.85□□□□□ -0.67
UBE3B-212ENST00000540230 SAT2Q96F10 170 aaPredicted RBP10.85□□□□□ -0.67
UBE3B-212ENST00000540230 SMIM3Q9BZL3 60 aa10.85□□□□□ -0.67
UBE3B-212ENST00000540230 RNF24Q9Y225 148 aa10.85□□□□□ -0.67
UBE3B-212ENST00000540230 KMT2AQ03164 3969 aa10.85□□□□□ -0.67
UBE3B-212ENST00000540230 CRXO43186 299 aaPredicted RBP10.84□□□□□ -0.67
UBE3B-212ENST00000540230 PET100P0DJ07 73 aa10.84□□□□□ -0.67
UBE3B-212ENST00000540230 CXCL2P19875 107 aa10.84□□□□□ -0.67
UBE3B-212ENST00000540230 RPL12P30050 165 aaKnown RBP10.84□□□□□ -0.67
UBE3B-212ENST00000540230 HIST1H1AQ02539 215 aaPredicted RBP10.84□□□□□ -0.67
UBE3B-212ENST00000540230 SPINK13Q1W4C9 94 aa10.84□□□□□ -0.67
UBE3B-212ENST00000540230 OR8A1Q8NGG7 326 aa10.84□□□□□ -0.67
UBE3B-212ENST00000540230 ATP5SQ99766 215 aa10.84□□□□□ -0.67
UBE3B-212ENST00000540230 HRH4Q9H3N8 390 aa10.84□□□□□ -0.67
UBE3B-212ENST00000540230 ZNF586Q9NXT0 402 aa10.84□□□□□ -0.67
UBE3B-212ENST00000540230 PRAC2D3DTV9 90 aa10.84□□□□□ -0.67
UBE3B-212ENST00000540230 DUSP14O95147 198 aaKnown RBP10.84□□□□□ -0.67
UBE3B-212ENST00000540230 PYYP10082 97 aa10.84□□□□□ -0.67
UBE3B-212ENST00000540230 RPUSD4Q96CM3 377 aaKnown RBP10.84□□□□□ -0.67
UBE3B-212ENST00000540230 SLC50A1Q9BRV3 221 aa10.84□□□□□ -0.67
UBE3B-212ENST00000540230 WFDC1Q9HC57 220 aa10.84□□□□□ -0.67
UBE3B-212ENST00000540230 RFNGQ9Y644 331 aa10.84□□□□□ -0.67
UBE3B-212ENST00000540230 ZNF767PQ75MW2 155 aa10.83□□□□□ -0.68
UBE3B-212ENST00000540230 MIR17HGQ75NE6 70 aa10.83□□□□□ -0.68
UBE3B-212ENST00000540230 BAP18Q8IXM2 172 aa10.83□□□□□ -0.68
UBE3B-212ENST00000540230 NEU1Q99519 415 aa10.83□□□□□ -0.68
UBE3B-212ENST00000540230 SLC25A2Q9BXI2 301 aa10.83□□□□□ -0.68
UBE3B-212ENST00000540230 MED28Q9H204 178 aa10.83□□□□□ -0.68
UBE3B-212ENST00000540230 VPS13DQ5THJ4 4388 aa10.83□□□□□ -0.68
UBE3B-212ENST00000540230 TRAV12-2A0A075B6T6 113 aa10.82□□□□□ -0.68
UBE3B-212ENST00000540230 JTBO76095 146 aa10.82□□□□□ -0.68
UBE3B-212ENST00000540230 PRM2P04554 102 aa10.82□□□□□ -0.68
UBE3B-212ENST00000540230 Q5BKY6 102 aa10.82□□□□□ -0.68
UBE3B-212ENST00000540230 Q6ZTC4 211 aa10.82□□□□□ -0.68
UBE3B-212ENST00000540230 FAM167A-AS1Q96KT0 104 aa10.82□□□□□ -0.68
UBE3B-212ENST00000540230 IGF2BP2-AS1Q96M15 143 aa10.82□□□□□ -0.68
UBE3B-212ENST00000540230 PARD6GQ9BYG4 376 aaPredicted RBP10.81□□□□□ -0.68
UBE3B-212ENST00000540230 TMEM14CQ9P0S9 112 aa10.81□□□□□ -0.68
UBE3B-212ENST00000540230 TRBV19A0A075B6N1 114 aa10.8□□□□□ -0.68
UBE3B-212ENST00000540230 BOLA2-SMG1P6H3BVE0 249 aa10.8□□□□□ -0.68
UBE3B-212ENST00000540230 NDUFB4O95168 129 aa10.8□□□□□ -0.68
UBE3B-212ENST00000540230 EMP1P54849 157 aa10.8□□□□□ -0.68
UBE3B-212ENST00000540230 RHOBP62745 196 aa10.8□□□□□ -0.68
UBE3B-212ENST00000540230 LINC00476Q8WZB0 136 aa10.8□□□□□ -0.68
UBE3B-212ENST00000540230 KLK5Q9Y337 293 aaPredicted RBP10.8□□□□□ -0.68
UBE3B-212ENST00000540230 GOLT1BQ9Y3E0 138 aa10.8□□□□□ -0.68
UBE3B-212ENST00000540230 M0R3E3 92 aa10.79□□□□□ -0.68
UBE3B-212ENST00000540230 EIF3GO75821 320 aaKnown RBP eCLIP10.79□□□□□ -0.68
UBE3B-212ENST00000540230 HIST1H1EP10412 219 aaKnown RBP10.79□□□□□ -0.68
UBE3B-212ENST00000540230 KIR3DS1Q14943 382 aa10.79□□□□□ -0.68
UBE3B-212ENST00000540230 GUK1Q16774 197 aa10.79□□□□□ -0.68
UBE3B-212ENST00000540230 RGS21Q2M5E4 152 aa10.79□□□□□ -0.68
UBE3B-212ENST00000540230 C12orf74Q32Q52 190 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms