RNA–Protein interactions for RNA: ENST00000539982.5

CLSTN3-209, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-209ENST00000539982 DUXBA0A1W2PPF3 345 aa8.05□□□□□ -1.12
CLSTN3-209ENST00000539982 C5orf51A6NDU8 294 aa8.05□□□□□ -1.12
CLSTN3-209ENST00000539982 FAM25EA8MYX2 175 aa8.05□□□□□ -1.12
CLSTN3-209ENST00000539982 CCSO14618 274 aa8.05□□□□□ -1.12
CLSTN3-209ENST00000539982 ADAP1O75689 374 aa8.05□□□□□ -1.12
CLSTN3-209ENST00000539982 SIX6O95475 246 aa8.05□□□□□ -1.12
CLSTN3-209ENST00000539982 HOXB5P09067 269 aa8.05□□□□□ -1.12
CLSTN3-209ENST00000539982 MEOX2P50222 304 aa8.05□□□□□ -1.12
CLSTN3-209ENST00000539982 H2BFSP57053 126 aa8.05□□□□□ -1.12
CLSTN3-209ENST00000539982 ZNF90Q03938 601 aa8.05□□□□□ -1.12
CLSTN3-209ENST00000539982 SPINK13Q1W4C9 94 aa8.05□□□□□ -1.12
CLSTN3-209ENST00000539982 TMEM268Q5VZI3 342 aa8.05□□□□□ -1.12
CLSTN3-209ENST00000539982 SELENOHQ8IZQ5 122 aaKnown RBP8.05□□□□□ -1.12
CLSTN3-209ENST00000539982 LHFPL5Q8TAF8 219 aa8.05□□□□□ -1.12
CLSTN3-209ENST00000539982 RBPMSQ93062 196 aaKnown RBP8.05□□□□□ -1.12
CLSTN3-209ENST00000539982 ZNF503Q96F45 646 aa8.05□□□□□ -1.12
CLSTN3-209ENST00000539982 UHRF2Q96PU4 802 aa8.05□□□□□ -1.12
CLSTN3-209ENST00000539982 CACNG5Q9UF02 275 aa8.05□□□□□ -1.12
CLSTN3-209ENST00000539982 ZFP92A6NM28 416 aa8.04□□□□□ -1.12
CLSTN3-209ENST00000539982 M0R2Z0 102 aa8.04□□□□□ -1.12
CLSTN3-209ENST00000539982 DUSP14O95147 198 aaKnown RBP8.04□□□□□ -1.12
CLSTN3-209ENST00000539982 CNN1P51911 297 aaKnown RBP8.04□□□□□ -1.12
CLSTN3-209ENST00000539982 RAP2BP61225 183 aa8.04□□□□□ -1.12
CLSTN3-209ENST00000539982 ESRGQ1W209 222 aa8.04□□□□□ -1.12
CLSTN3-209ENST00000539982 NMSQ5H8A3 153 aa8.04□□□□□ -1.12
CLSTN3-209ENST00000539982 GGNBP1Q5YKI7 109 aa8.04□□□□□ -1.12
CLSTN3-209ENST00000539982 LYZL2Q7Z4W2 148 aa8.04□□□□□ -1.12
CLSTN3-209ENST00000539982 GNPNAT1Q96EK6 184 aaPredicted RBP8.04□□□□□ -1.12
CLSTN3-209ENST00000539982 C2orf50Q96LR7 162 aa8.04□□□□□ -1.12
CLSTN3-209ENST00000539982 ZNF586Q9NXT0 402 aa8.04□□□□□ -1.12
CLSTN3-209ENST00000539982 CACFD1Q9UGQ2 172 aa8.04□□□□□ -1.12
CLSTN3-209ENST00000539982 FLG2Q5D862 2391 aaPredicted RBP8.04□□□□□ -1.12
CLSTN3-209ENST00000539982 FAT1Q14517 4588 aa8.03□□□□□ -1.12
CLSTN3-209ENST00000539982 IGKV1D-37A0A075B6S9 117 aa8.03□□□□□ -1.12
CLSTN3-209ENST00000539982 BOLA2-SMG1P6H3BVE0 249 aa8.03□□□□□ -1.12
CLSTN3-209ENST00000539982 FABP1P07148 127 aa8.03□□□□□ -1.12
CLSTN3-209ENST00000539982 GPX4P36969 197 aaPredicted RBP8.03□□□□□ -1.12
CLSTN3-209ENST00000539982 LYZP61626 148 aa8.03□□□□□ -1.12
CLSTN3-209ENST00000539982 CYCSP99999 105 aaKnown RBP8.03□□□□□ -1.12
CLSTN3-209ENST00000539982 OR5I1Q13606 314 aa8.03□□□□□ -1.12
CLSTN3-209ENST00000539982 GAMTQ14353 236 aa8.03□□□□□ -1.12
CLSTN3-209ENST00000539982 ZFP69Q49AA0 526 aa8.03□□□□□ -1.12
CLSTN3-209ENST00000539982 CDPF1Q6NVV7 123 aa8.03□□□□□ -1.12
CLSTN3-209ENST00000539982 OR2T35Q8NGX2 323 aa8.03□□□□□ -1.12
CLSTN3-209ENST00000539982 RXFP4Q8TDU9 374 aa8.03□□□□□ -1.12
CLSTN3-209ENST00000539982 C18orf15Q96N68 181 aa8.03□□□□□ -1.12
CLSTN3-209ENST00000539982 LINC01587Q99440 93 aa8.03□□□□□ -1.12
CLSTN3-209ENST00000539982 NMES1Q9C002 83 aa8.03□□□□□ -1.12
CLSTN3-209ENST00000539982 TIMM8BQ9Y5J9 83 aaPredicted RBP8.03□□□□□ -1.12
CLSTN3-209ENST00000539982 U3KQ87 197 aa8.03□□□□□ -1.12
CLSTN3-209ENST00000539982 TRAV26-1A0A087WT03 109 aa8.02□□□□□ -1.13
CLSTN3-209ENST00000539982 SMLR1H3BR10 107 aa8.02□□□□□ -1.13
CLSTN3-209ENST00000539982 EREGO14944 169 aa8.02□□□□□ -1.13
CLSTN3-209ENST00000539982 C1QBP02746 253 aa8.02□□□□□ -1.13
CLSTN3-209ENST00000539982 M6PRP20645 277 aa8.02□□□□□ -1.13
CLSTN3-209ENST00000539982 GALR1P47211 349 aa8.02□□□□□ -1.13
CLSTN3-209ENST00000539982 LINC00315P59091 139 aa8.02□□□□□ -1.13
CLSTN3-209ENST00000539982 TAS2R60P59551 318 aa8.02□□□□□ -1.13
CLSTN3-209ENST00000539982 IAH1Q2TAA2 248 aaPredicted RBP8.02□□□□□ -1.13
CLSTN3-209ENST00000539982 Q6ZRN7 208 aaPredicted RBP8.02□□□□□ -1.13
CLSTN3-209ENST00000539982 BAP18Q8IXM2 172 aa8.02□□□□□ -1.13
CLSTN3-209ENST00000539982 TMEM256Q8N2U0 113 aa8.02□□□□□ -1.13
CLSTN3-209ENST00000539982 C17orf77Q96MU5 243 aa8.02□□□□□ -1.13
CLSTN3-209ENST00000539982 RSG1Q9BU20 258 aa8.02□□□□□ -1.13
CLSTN3-209ENST00000539982 MRPS16Q9Y3D3 137 aaKnown RBP8.02□□□□□ -1.13
CLSTN3-209ENST00000539982 VPS13BQ7Z7G8 4022 aa8.02□□□□□ -1.13
CLSTN3-209ENST00000539982 TRAV12-2A0A075B6T6 113 aa8.01□□□□□ -1.13
CLSTN3-209ENST00000539982 SLC25A6P12236 298 aa8.01□□□□□ -1.13
CLSTN3-209ENST00000539982 FUSP35637 526 aaKnown RBP eCLIP8.01□□□□□ -1.13
CLSTN3-209ENST00000539982 ATP5IP56385 69 aaPredicted RBP8.01□□□□□ -1.13
CLSTN3-209ENST00000539982 FGL1Q08830 312 aa8.01□□□□□ -1.13
CLSTN3-209ENST00000539982 OR2F1Q13607 317 aa8.01□□□□□ -1.13
CLSTN3-209ENST00000539982 ZNF493Q6ZR52 646 aa8.01□□□□□ -1.13
CLSTN3-209ENST00000539982 TMEM144Q7Z5S9 345 aa8.01□□□□□ -1.13
CLSTN3-209ENST00000539982 OR10J6PQ8NGY7 276 aa8.01□□□□□ -1.13
CLSTN3-209ENST00000539982 C16orf74Q96GX8 76 aa8.01□□□□□ -1.13
CLSTN3-209ENST00000539982 SLC35E1Q96K37 410 aa8.01□□□□□ -1.13
CLSTN3-209ENST00000539982 NOP10Q9NPE3 64 aaKnown RBP8.01□□□□□ -1.13
CLSTN3-209ENST00000539982 GSKIPQ9P0R6 139 aa8.01□□□□□ -1.13
CLSTN3-209ENST00000539982 A0A0J9YY99 117 aa8□□□□□ -1.13
CLSTN3-209ENST00000539982 G3V3Q6 166 aa8□□□□□ -1.13
CLSTN3-209ENST00000539982 H3BNG1 76 aa8□□□□□ -1.13
CLSTN3-209ENST00000539982 HTN1P15515 57 aa8□□□□□ -1.13
CLSTN3-209ENST00000539982 IL15RAQ13261 267 aa8□□□□□ -1.13
CLSTN3-209ENST00000539982 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8□□□□□ -1.13
CLSTN3-209ENST00000539982 ZBTB8BQ8NAP8 495 aaPredicted RBP8□□□□□ -1.13
CLSTN3-209ENST00000539982 OR4D5Q8NGN0 318 aa8□□□□□ -1.13
CLSTN3-209ENST00000539982 OR1B1Q8NGR6 318 aa8□□□□□ -1.13
CLSTN3-209ENST00000539982 PPP1R1CQ8WVI7 109 aa8□□□□□ -1.13
CLSTN3-209ENST00000539982 HYLS1Q96M11 299 aa8□□□□□ -1.13
CLSTN3-209ENST00000539982 TRGV9Q99603 122 aa8□□□□□ -1.13
CLSTN3-209ENST00000539982 SLC25A39Q9BZJ4 359 aaPredicted RBP8□□□□□ -1.13
CLSTN3-209ENST00000539982 SLC25A32Q9H2D1 315 aa8□□□□□ -1.13
CLSTN3-209ENST00000539982 SLC25A22Q9H936 323 aa8□□□□□ -1.13
CLSTN3-209ENST00000539982 MDFICQ9P1T7 246 aa8□□□□□ -1.13
CLSTN3-209ENST00000539982 TRAV8-2A0A0B4J237 113 aa7.99□□□□□ -1.13
CLSTN3-209ENST00000539982 ZNF98A6NK75 572 aa7.99□□□□□ -1.13
CLSTN3-209ENST00000539982 FAM229AH3BQW9 127 aa7.99□□□□□ -1.13
CLSTN3-209ENST00000539982 CFDP00746 253 aaPredicted RBP7.99□□□□□ -1.13
CLSTN3-209ENST00000539982 IFNA5P01569 189 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms