RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 MIC13Q5XKP0 118 aa10.85□□□□□ -0.67
USB1-203ENST00000539737 UHRF2Q96PU4 802 aa10.85□□□□□ -0.67
USB1-203ENST00000539737 SLC39A9Q9NUM3 307 aa10.85□□□□□ -0.67
USB1-203ENST00000539737 PXMP4Q9Y6I8 212 aa10.85□□□□□ -0.67
USB1-203ENST00000539737 HSPG2P98160 4391 aa10.85□□□□□ -0.67
USB1-203ENST00000539737 MORN3Q6PF18 240 aaPredicted RBP10.84□□□□□ -0.67
USB1-203ENST00000539737 PATE2Q6UY27 113 aa10.84□□□□□ -0.67
USB1-203ENST00000539737 ZNF767PQ75MW2 155 aa10.84□□□□□ -0.67
USB1-203ENST00000539737 LINC00305Q7Z4B0 112 aa10.84□□□□□ -0.67
USB1-203ENST00000539737 ZNF709Q8N972 641 aa10.84□□□□□ -0.67
USB1-203ENST00000539737 C2CD4CQ8TF44 421 aa10.84□□□□□ -0.67
USB1-203ENST00000539737 C17orf112F2Z3M2 114 aa10.83□□□□□ -0.68
USB1-203ENST00000539737 ISLRO14498 428 aa10.83□□□□□ -0.68
USB1-203ENST00000539737 SOCS3O14543 225 aa10.83□□□□□ -0.68
USB1-203ENST00000539737 IFNA5P01569 189 aa10.83□□□□□ -0.68
USB1-203ENST00000539737 SPP1P10451 314 aa10.83□□□□□ -0.68
USB1-203ENST00000539737 RSG1Q9BU20 258 aa10.83□□□□□ -0.68
USB1-203ENST00000539737 WDR61Q9GZS3 305 aaKnown RBP10.83□□□□□ -0.68
USB1-203ENST00000539737 C11orf68Q9H3H3 251 aaKnown RBP10.83□□□□□ -0.68
USB1-203ENST00000539737 DNAJC4Q9NNZ3 241 aa10.83□□□□□ -0.68
USB1-203ENST00000539737 M0R2N4 97 aa10.82□□□□□ -0.68
USB1-203ENST00000539737 RBMY1A1P0DJD3 496 aaKnown RBP10.82□□□□□ -0.68
USB1-203ENST00000539737 RBMY1CP0DJD4 496 aa10.82□□□□□ -0.68
USB1-203ENST00000539737 NUTF2P61970 127 aaKnown RBP10.82□□□□□ -0.68
USB1-203ENST00000539737 RBMY1FQ15415 496 aaKnown RBP10.82□□□□□ -0.68
USB1-203ENST00000539737 OR2T35Q8NGX2 323 aa10.82□□□□□ -0.68
USB1-203ENST00000539737 TMEM37Q8WXS4 190 aa10.82□□□□□ -0.68
USB1-203ENST00000539737 C16orf92Q96LL3 132 aa10.82□□□□□ -0.68
USB1-203ENST00000539737 PARD6GQ9BYG4 376 aaPredicted RBP10.82□□□□□ -0.68
USB1-203ENST00000539737 SMIM3Q9BZL3 60 aa10.82□□□□□ -0.68
USB1-203ENST00000539737 A0A087X0K7 114 aa10.81□□□□□ -0.68
USB1-203ENST00000539737 CXCL2P19875 107 aa10.81□□□□□ -0.68
USB1-203ENST00000539737 ACTL10Q5JWF8 245 aa10.81□□□□□ -0.68
USB1-203ENST00000539737 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.81□□□□□ -0.68
USB1-203ENST00000539737 Q6ZTC4 211 aa10.81□□□□□ -0.68
USB1-203ENST00000539737 BPIFA4PQ86YQ2 179 aa10.81□□□□□ -0.68
USB1-203ENST00000539737 SCGB1C1Q8TD33 95 aa10.81□□□□□ -0.68
USB1-203ENST00000539737 AQP10Q96PS8 301 aa10.81□□□□□ -0.68
USB1-203ENST00000539737 ZNF266Q14584 549 aa10.8□□□□□ -0.68
USB1-203ENST00000539737 TRPT1Q86TN4 253 aaKnown RBP10.8□□□□□ -0.68
USB1-203ENST00000539737 INO80EQ8NBZ0 244 aaPredicted RBP10.8□□□□□ -0.68
USB1-203ENST00000539737 LINC00052Q96N35 136 aa10.8□□□□□ -0.68
USB1-203ENST00000539737 FXYD6-FXYD2A0A087WZ82 144 aa10.79□□□□□ -0.68
USB1-203ENST00000539737 IGHV4-28A0A0C4DH34 117 aa10.79□□□□□ -0.68
USB1-203ENST00000539737 KNCNA6PVL3 124 aa10.79□□□□□ -0.68
USB1-203ENST00000539737 RTL8CO15255 209 aa10.79□□□□□ -0.68
USB1-203ENST00000539737 HLA-DRB4P13762 266 aa10.79□□□□□ -0.68
USB1-203ENST00000539737 HLA-DMBP28068 263 aa10.79□□□□□ -0.68
USB1-203ENST00000539737 SPATA31B1PQ5VZV4 182 aa10.79□□□□□ -0.68
USB1-203ENST00000539737 LCN15Q6UWW0 184 aa10.79□□□□□ -0.68
USB1-203ENST00000539737 FOXI2Q6ZQN5 318 aa10.79□□□□□ -0.68
USB1-203ENST00000539737 Q8NAQ8 132 aa10.79□□□□□ -0.68
USB1-203ENST00000539737 C1QTNF4Q9BXJ3 329 aa10.79□□□□□ -0.68
USB1-203ENST00000539737 RPRMQ9NS64 109 aa10.79□□□□□ -0.68
USB1-203ENST00000539737 CLEC5AQ9NY25 188 aa10.79□□□□□ -0.68
USB1-203ENST00000539737 HLA-DRB4X5D2U9 266 aa10.79□□□□□ -0.68
USB1-203ENST00000539737 IGHV4-4A0A075B6R2 117 aa10.78□□□□□ -0.68
USB1-203ENST00000539737 MRPS12O15235 138 aaKnown RBP10.78□□□□□ -0.68
USB1-203ENST00000539737 GIG44P09565 113 aaPredicted RBP10.78□□□□□ -0.68
USB1-203ENST00000539737 MIFP14174 115 aa10.78□□□□□ -0.68
USB1-203ENST00000539737 Q5BKY6 102 aa10.78□□□□□ -0.68
USB1-203ENST00000539737 MORN5Q5VZ52 161 aa10.78□□□□□ -0.68
USB1-203ENST00000539737 ZNF575Q86XF7 245 aa10.78□□□□□ -0.68
USB1-203ENST00000539737 LRRC20Q8TCA0 184 aa10.78□□□□□ -0.68
USB1-203ENST00000539737 C17orf77Q96MU5 243 aa10.78□□□□□ -0.68
USB1-203ENST00000539737 SLC50A1Q9BRV3 221 aa10.78□□□□□ -0.68
USB1-203ENST00000539737 MRPL32Q9BYC8 188 aaKnown RBP10.78□□□□□ -0.68
USB1-203ENST00000539737 CELA1Q9UNI1 258 aa10.78□□□□□ -0.68
USB1-203ENST00000539737 C4BPBP20851 252 aa10.77□□□□□ -0.69
USB1-203ENST00000539737 GUK1Q16774 197 aa10.77□□□□□ -0.69
USB1-203ENST00000539737 EBLN2Q6P2I7 272 aa10.77□□□□□ -0.69
USB1-203ENST00000539737 SAV1Q9H4B6 383 aaPredicted RBP10.77□□□□□ -0.69
USB1-203ENST00000539737 WFDC1Q9HC57 220 aa10.77□□□□□ -0.69
USB1-203ENST00000539737 TNFSF18Q9UNG2 199 aa10.77□□□□□ -0.69
USB1-203ENST00000539737 PRSS29PA6NIE9 313 aa10.76□□□□□ -0.69
USB1-203ENST00000539737 C11orf94C9JXX5 98 aa10.76□□□□□ -0.69
USB1-203ENST00000539737 H3BMM0 161 aa10.76□□□□□ -0.69
USB1-203ENST00000539737 IGLC2P0DOY2 106 aa10.76□□□□□ -0.69
USB1-203ENST00000539737 TCTAP57738 103 aa10.76□□□□□ -0.69
USB1-203ENST00000539737 GCSAMLQ5JQS6 135 aa10.76□□□□□ -0.69
USB1-203ENST00000539737 FFAR4Q5NUL3 377 aa10.76□□□□□ -0.69
USB1-203ENST00000539737 FAM78BQ5VT40 261 aa10.76□□□□□ -0.69
USB1-203ENST00000539737 HRH4Q9H3N8 390 aa10.76□□□□□ -0.69
USB1-203ENST00000539737 TMEM14CQ9P0S9 112 aa10.76□□□□□ -0.69
USB1-203ENST00000539737 TIMM9Q9Y5J7 89 aa10.76□□□□□ -0.69
USB1-203ENST00000539737 TRAV8-2A0A0B4J237 113 aa10.75□□□□□ -0.69
USB1-203ENST00000539737 RNF222A6NCQ9 220 aa10.75□□□□□ -0.69
USB1-203ENST00000539737 G3V3Q6 166 aa10.75□□□□□ -0.69
USB1-203ENST00000539737 MED14OSP0DP75 135 aa10.75□□□□□ -0.69
USB1-203ENST00000539737 ZNF738Q8NE65 137 aa10.75□□□□□ -0.69
USB1-203ENST00000539737 C20orf173Q96LM9 149 aa10.75□□□□□ -0.69
USB1-203ENST00000539737 CLUHP3Q96NS8 147 aa10.75□□□□□ -0.69
USB1-203ENST00000539737 FUT9Q9Y231 359 aa10.75□□□□□ -0.69
USB1-203ENST00000539737 LRP1BQ9NZR2 4599 aa10.75□□□□□ -0.69
USB1-203ENST00000539737 IGLV2-18A0A075B6J9 118 aa10.74□□□□□ -0.69
USB1-203ENST00000539737 TRAV5A0A0B4J249 113 aa10.74□□□□□ -0.69
USB1-203ENST00000539737 A0A0J9YX75 114 aa10.74□□□□□ -0.69
USB1-203ENST00000539737 ZNF253O75346 499 aa10.74□□□□□ -0.69
USB1-203ENST00000539737 RNF182Q8N6D2 247 aa10.74□□□□□ -0.69
USB1-203ENST00000539737 ZNF331Q9NQX6 463 aaPredicted RBP10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms