RNA–Protein interactions for RNA: ENST00000539712.5

DDB1-215, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,020 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-215ENST00000539712 PXDC1Q5TGL8 231 aa11.95□□□□□ -0.5
DDB1-215ENST00000539712 GOLT1BQ9Y3E0 138 aa11.95□□□□□ -0.5
DDB1-215ENST00000539712 L7N2F9 121 aa11.94□□□□□ -0.5
DDB1-215ENST00000539712 M0R2Z0 102 aa11.94□□□□□ -0.5
DDB1-215ENST00000539712 DUSP14O95147 198 aaKnown RBP11.94□□□□□ -0.5
DDB1-215ENST00000539712 PRB4P10163 310 aaPredicted RBP11.94□□□□□ -0.5
DDB1-215ENST00000539712 VAMP2P63027 116 aa11.94□□□□□ -0.5
DDB1-215ENST00000539712 SPINK13Q1W4C9 94 aa11.94□□□□□ -0.5
DDB1-215ENST00000539712 VWC2Q2TAL6 325 aa11.94□□□□□ -0.5
DDB1-215ENST00000539712 FAM222AQ5U5X8 452 aa11.94□□□□□ -0.5
DDB1-215ENST00000539712 LINC00305Q7Z4B0 112 aa11.94□□□□□ -0.5
DDB1-215ENST00000539712 ZNF738Q8NE65 137 aa11.94□□□□□ -0.5
DDB1-215ENST00000539712 IGSF23A1L1A6 192 aa11.93□□□□□ -0.5
DDB1-215ENST00000539712 SNRPCP09234 159 aaKnown RBP11.93□□□□□ -0.5
DDB1-215ENST00000539712 BCAP31P51572 246 aa11.93□□□□□ -0.5
DDB1-215ENST00000539712 CAV2P51636 162 aa11.93□□□□□ -0.5
DDB1-215ENST00000539712 RAB32Q13637 225 aa11.93□□□□□ -0.5
DDB1-215ENST00000539712 PSG3Q16557 428 aa11.93□□□□□ -0.5
DDB1-215ENST00000539712 OR8A1Q8NGG7 326 aa11.93□□□□□ -0.5
DDB1-215ENST00000539712 S100ZQ8WXG8 99 aa11.93□□□□□ -0.5
DDB1-215ENST00000539712 LYRM2Q9NU23 88 aaPredicted RBP11.93□□□□□ -0.5
DDB1-215ENST00000539712 WDR83OSQ9Y284 106 aa11.93□□□□□ -0.5
DDB1-215ENST00000539712 LOC102723971A0A1B0GUV8 181 aa11.92□□□□□ -0.5
DDB1-215ENST00000539712 HBE1P02100 147 aa11.92□□□□□ -0.5
DDB1-215ENST00000539712 CAMLGP49069 296 aa11.92□□□□□ -0.5
DDB1-215ENST00000539712 OPCMLQ14982 345 aa11.92□□□□□ -0.5
DDB1-215ENST00000539712 MZT2BQ6NZ67 158 aa11.92□□□□□ -0.5
DDB1-215ENST00000539712 NRARPQ7Z6K4 114 aa11.92□□□□□ -0.5
DDB1-215ENST00000539712 BAP18Q8IXM2 172 aa11.92□□□□□ -0.5
DDB1-215ENST00000539712 TMEM252Q8N6L7 170 aa11.92□□□□□ -0.5
DDB1-215ENST00000539712 ZNF331Q9NQX6 463 aaPredicted RBP11.92□□□□□ -0.5
DDB1-215ENST00000539712 YTHDF2Q9Y5A9 579 aaKnown RBP11.92□□□□□ -0.5
DDB1-215ENST00000539712 TRAV12-2A0A075B6T6 113 aa11.91□□□□□ -0.5
DDB1-215ENST00000539712 H3BQ15 152 aa11.91□□□□□ -0.5
DDB1-215ENST00000539712 SLC17A3O00476 420 aa11.91□□□□□ -0.5
DDB1-215ENST00000539712 COX7A2P2O60397 106 aa11.91□□□□□ -0.5
DDB1-215ENST00000539712 UPK1BO75841 260 aa11.91□□□□□ -0.5
DDB1-215ENST00000539712 IGLC2P0DOY2 106 aa11.91□□□□□ -0.5
DDB1-215ENST00000539712 SULT1A1P50225 295 aa11.91□□□□□ -0.5
DDB1-215ENST00000539712 RRN3P1Q2M238 152 aa11.91□□□□□ -0.5
DDB1-215ENST00000539712 MIC13Q5XKP0 118 aa11.91□□□□□ -0.5
DDB1-215ENST00000539712 S100A7AQ86SG5 101 aa11.91□□□□□ -0.5
DDB1-215ENST00000539712 RPUSD4Q96CM3 377 aaKnown RBP11.91□□□□□ -0.5
DDB1-215ENST00000539712 NIPSNAP3BQ9BS92 247 aa11.91□□□□□ -0.5
DDB1-215ENST00000539712 DNAJC4Q9NNZ3 241 aa11.91□□□□□ -0.5
DDB1-215ENST00000539712 UQCC1Q9NVA1 299 aa11.91□□□□□ -0.5
DDB1-215ENST00000539712 TRAV5A0A0B4J249 113 aa11.9□□□□□ -0.5
DDB1-215ENST00000539712 PLAC8L1A1L4L8 177 aa11.9□□□□□ -0.5
DDB1-215ENST00000539712 ZNF705GA8MUZ8 300 aaPredicted RBP11.9□□□□□ -0.5
DDB1-215ENST00000539712 H3BTX0 84 aa11.9□□□□□ -0.5
DDB1-215ENST00000539712 BOLA2-SMG1P6H3BVE0 249 aa11.9□□□□□ -0.5
DDB1-215ENST00000539712 CXCL2P19875 107 aa11.9□□□□□ -0.5
DDB1-215ENST00000539712 S100A10P60903 97 aa11.9□□□□□ -0.5
DDB1-215ENST00000539712 HIST1H1AQ02539 215 aaPredicted RBP11.9□□□□□ -0.5
DDB1-215ENST00000539712 OXA1LQ15070 435 aa11.9□□□□□ -0.5
DDB1-215ENST00000539712 C10orf113Q5VZT2 155 aa11.9□□□□□ -0.5
DDB1-215ENST00000539712 CHAC2Q8WUX2 184 aa11.9□□□□□ -0.5
DDB1-215ENST00000539712 SAT2Q96F10 170 aaPredicted RBP11.9□□□□□ -0.5
DDB1-215ENST00000539712 PRAC2D3DTV9 90 aa11.89□□□□□ -0.51
DDB1-215ENST00000539712 INSP01308 110 aa11.89□□□□□ -0.51
DDB1-215ENST00000539712 AZU1P20160 251 aa11.89□□□□□ -0.51
DDB1-215ENST00000539712 S100A11P31949 105 aa11.89□□□□□ -0.51
DDB1-215ENST00000539712 LCN15Q6UWW0 184 aa11.89□□□□□ -0.51
DDB1-215ENST00000539712 BPIFA4PQ86YQ2 179 aa11.89□□□□□ -0.51
DDB1-215ENST00000539712 TMEM208Q9BTX3 173 aa11.89□□□□□ -0.51
DDB1-215ENST00000539712 NDUFAF3Q9BU61 184 aa11.89□□□□□ -0.51
DDB1-215ENST00000539712 RNF24Q9Y225 148 aa11.89□□□□□ -0.51
DDB1-215ENST00000539712 HERC2O95714 4834 aa11.89□□□□□ -0.51
DDB1-215ENST00000539712 PKHD1P08F94 4074 aa11.88□□□□□ -0.51
DDB1-215ENST00000539712 TEX48A0A1B0GUV7 120 aa11.88□□□□□ -0.51
DDB1-215ENST00000539712 SIX6O95475 246 aa11.88□□□□□ -0.51
DDB1-215ENST00000539712 PVALBP20472 110 aaPredicted RBP11.88□□□□□ -0.51
DDB1-215ENST00000539712 RPL29P47914 159 aaKnown RBP11.88□□□□□ -0.51
DDB1-215ENST00000539712 RAB31Q13636 194 aa11.88□□□□□ -0.51
DDB1-215ENST00000539712 LRRC20Q8TCA0 184 aa11.88□□□□□ -0.51
DDB1-215ENST00000539712 SLC39A9Q9NUM3 307 aa11.88□□□□□ -0.51
DDB1-215ENST00000539712 PKD1P98161 4303 aa11.87□□□□□ -0.51
DDB1-215ENST00000539712 UBE2L5PA0A1B0GUS4 154 aa11.87□□□□□ -0.51
DDB1-215ENST00000539712 TSPOP30536 169 aa11.87□□□□□ -0.51
DDB1-215ENST00000539712 RHOBP62745 196 aa11.87□□□□□ -0.51
DDB1-215ENST00000539712 KIR3DS1Q14943 382 aa11.87□□□□□ -0.51
DDB1-215ENST00000539712 Q6ZRG5 221 aa11.87□□□□□ -0.51
DDB1-215ENST00000539712 POM121L12Q8N7R1 296 aa11.87□□□□□ -0.51
DDB1-215ENST00000539712 SLC50A1Q9BRV3 221 aa11.87□□□□□ -0.51
DDB1-215ENST00000539712 H0YIZ8 118 aa11.86□□□□□ -0.51
DDB1-215ENST00000539712 B2MP61769 119 aa11.86□□□□□ -0.51
DDB1-215ENST00000539712 NHLH2Q02577 135 aa11.86□□□□□ -0.51
DDB1-215ENST00000539712 STX12Q86Y82 276 aa11.86□□□□□ -0.51
DDB1-215ENST00000539712 ENKURQ8TC29 256 aa11.86□□□□□ -0.51
DDB1-215ENST00000539712 FAM210BQ96KR6 192 aa11.86□□□□□ -0.51
DDB1-215ENST00000539712 ZNF586Q9NXT0 402 aa11.86□□□□□ -0.51
DDB1-215ENST00000539712 PTTG2Q9NZH5 202 aa11.86□□□□□ -0.51
DDB1-215ENST00000539712 P0DMU3 169 aa11.85□□□□□ -0.51
DDB1-215ENST00000539712 FAM231AP0DMU4 169 aa11.85□□□□□ -0.51
DDB1-215ENST00000539712 FAM231CP0DMU5 169 aa11.85□□□□□ -0.51
DDB1-215ENST00000539712 HBG1P69891 147 aa11.85□□□□□ -0.51
DDB1-215ENST00000539712 HBG2P69892 147 aa11.85□□□□□ -0.51
DDB1-215ENST00000539712 BAXQ07812 192 aa11.85□□□□□ -0.51
DDB1-215ENST00000539712 ATP6V1FQ16864 119 aa11.85□□□□□ -0.51
DDB1-215ENST00000539712 OR1L4Q8NGR5 311 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms